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The map label for this gene is ypfJ [H]

Identifier: 154245213

GI number: 154245213

Start: 1455090

End: 1455992

Strand: Reverse

Name: ypfJ [H]

Synonym: Xaut_1265

Alternate gene names: 154245213

Gene position: 1455992-1455090 (Counterclockwise)

Preceding gene: 154245215

Following gene: 154245212

Centisome position: 27.43

GC content: 68.11

Gene sequence:

>903_bases
ATGCGTTGGGACGATTTCCGCTCCAGCGATAATGTGGAAGACCGGCGGGGCGACGGCGGTGGCGGTGGCGGCTTCCAGAT
GCCGGGCGGCCGGGGCGGCCTCGGCATCGGCACCATCATCATCGTGGGCATCGTCGGCTGGGCGCTGGGCATCAATCCGG
CCCTGCTCATCGGCGGGCTGGAAGCCATCAACGGCATGGGCGGCGGCAACGCCCCGCAGCAGCAGGCCGCGCCGCGCACC
ACCCCCCAGGGCGCGCCCAAGGATGAGCTCGGCCGATTCGCCGCCGCCGTGCTGGCCCAGACCGAGGATGTGTGGACCGA
GCTGTTCCGCGCCGATGGCAAGACCTATCAGGATCCCAAGCTGGTGCTGTTCTCCGGCGCCACGCGCTCGGCCTGCGGCG
GCGCCCAGTCGGCCATGGGGCCGTTCTATTGTCCGCTCGACCAGAAGGTCTATCTGGACCTCTCCTTCTTCCAGGAGATG
AAGACCCGCTTCAAGGCGCCGGGCGACTTCGCCGCCGCCTATGTCATCGCCCACGAGGTGGGCCACCATGTGGAAAACCT
CATCGGCATCCTGCCCAAGGTGCAGCAGGCGCAGGCGCGCGCCTCATCGCGGGCGGAGGCGAACAACCTGTCCGTCCGCG
TGGAGCTGATGGCCGATTGCCTCGCCGGGGTGTGGGCCTACCACGCCAATGCCCGCTTCCGCATTCTGGAGCCCGGCGAT
GTGGAGGAGGCGCTGAACGCCGCCACAGCCATCGGCGACGACCGGCTACAGAAGCAGTCGCAAGGTTATGCGGTGCCCGA
CAGCTTCACCCACGGCACCTCGCAGCAGCGGGTGAACTGGTTCACGCGCGGGCTGAAGGGCGGCTCCATGCAGCAATGCA
ATACCTTCTCAGGGGCGATCTGA

Upstream 100 bases:

>100_bases
GTCACGATGTAAGCCCATGTTCGAGACGGCGTTCAAGGCGACCCTCGGGAGCCCGGACGCGATCTGGTCAAGGCCGGAAA
GCCTGTGCGGGAGGCGTGCG

Downstream 100 bases:

>100_bases
ACCGGCCTGCGTCAGGACCAGCCGGCATATCCTTCCCAGTTGCCGTCGCATTCGTGCGACGGGAGCGGCTTGCGTCACTC
TCAGGGCACCGAGAGCATCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MRWDDFRSSDNVEDRRGDGGGGGGFQMPGGRGGLGIGTIIIVGIVGWALGINPALLIGGLEAINGMGGGNAPQQQAAPRT
TPQGAPKDELGRFAAAVLAQTEDVWTELFRADGKTYQDPKLVLFSGATRSACGGAQSAMGPFYCPLDQKVYLDLSFFQEM
KTRFKAPGDFAAAYVIAHEVGHHVENLIGILPKVQQAQARASSRAEANNLSVRVELMADCLAGVWAYHANARFRILEPGD
VEEALNAATAIGDDRLQKQSQGYAVPDSFTHGTSQQRVNWFTRGLKGGSMQQCNTFSGAI

Sequences:

>Translated_300_residues
MRWDDFRSSDNVEDRRGDGGGGGGFQMPGGRGGLGIGTIIIVGIVGWALGINPALLIGGLEAINGMGGGNAPQQQAAPRT
TPQGAPKDELGRFAAAVLAQTEDVWTELFRADGKTYQDPKLVLFSGATRSACGGAQSAMGPFYCPLDQKVYLDLSFFQEM
KTRFKAPGDFAAAYVIAHEVGHHVENLIGILPKVQQAQARASSRAEANNLSVRVELMADCLAGVWAYHANARFRILEPGD
VEEALNAATAIGDDRLQKQSQGYAVPDSFTHGTSQQRVNWFTRGLKGGSMQQCNTFSGAI
>Mature_300_residues
MRWDDFRSSDNVEDRRGDGGGGGGFQMPGGRGGLGIGTIIIVGIVGWALGINPALLIGGLEAINGMGGGNAPQQQAAPRT
TPQGAPKDELGRFAAAVLAQTEDVWTELFRADGKTYQDPKLVLFSGATRSACGGAQSAMGPFYCPLDQKVYLDLSFFQEM
KTRFKAPGDFAAAYVIAHEVGHHVENLIGILPKVQQAQARASSRAEANNLSVRVELMADCLAGVWAYHANARFRILEPGD
VEEALNAATAIGDDRLQKQSQGYAVPDSFTHGTSQQRVNWFTRGLKGGSMQQCNTFSGAI

Specific function: Unknown

COG id: COG2321

COG function: function code R; Predicted metalloprotease

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788819, Length=304, Percent_Identity=52.9605263157895, Blast_Score=303, Evalue=1e-83,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007343 [H]

Pfam domain/function: PF04228 Zn_peptidase [H]

EC number: NA

Molecular weight: Translated: 31947; Mature: 31947

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRWDDFRSSDNVEDRRGDGGGGGGFQMPGGRGGLGIGTIIIVGIVGWALGINPALLIGGL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHH
EAINGMGGGNAPQQQAAPRTTPQGAPKDELGRFAAAVLAQTEDVWTELFRADGKTYQDPK
HHHCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
LVLFSGATRSACGGAQSAMGPFYCPLDQKVYLDLSFFQEMKTRFKAPGDFAAAYVIAHEV
EEEEECCCCHHCCCCHHCCCCEECCCCCEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHH
GHHVENLIGILPKVQQAQARASSRAEANNLSVRVELMADCLAGVWAYHANARFRILEPGD
HHHHHHHHHHHCHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHCCCCEEEEECCCC
VEEALNAATAIGDDRLQKQSQGYAVPDSFTHGTSQQRVNWFTRGLKGGSMQQCNTFSGAI
HHHHHHHHHHHCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRWDDFRSSDNVEDRRGDGGGGGGFQMPGGRGGLGIGTIIIVGIVGWALGINPALLIGGL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHH
EAINGMGGGNAPQQQAAPRTTPQGAPKDELGRFAAAVLAQTEDVWTELFRADGKTYQDPK
HHHCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
LVLFSGATRSACGGAQSAMGPFYCPLDQKVYLDLSFFQEMKTRFKAPGDFAAAYVIAHEV
EEEEECCCCHHCCCCHHCCCCEECCCCCEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHH
GHHVENLIGILPKVQQAQARASSRAEANNLSVRVELMADCLAGVWAYHANARFRILEPGD
HHHHHHHHHHHCHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHCCCCEEEEECCCC
VEEALNAATAIGDDRLQKQSQGYAVPDSFTHGTSQQRVNWFTRGLKGGSMQQCNTFSGAI
HHHHHHHHHHHCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]