| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is oxlT [H]
Identifier: 154245196
GI number: 154245196
Start: 1437682
End: 1438992
Strand: Direct
Name: oxlT [H]
Synonym: Xaut_1248
Alternate gene names: 154245196
Gene position: 1437682-1438992 (Clockwise)
Preceding gene: 154245195
Following gene: 154245214
Centisome position: 27.08
GC content: 66.9
Gene sequence:
>1311_bases ATGTCGCAGAATCTTTCGACGCCCGTGCGCGGGCCGTTGGGCGGAAGATGGATGCAGCTCGCCATCGGCGTGGTCTGCAT GTCCATGATCGCCAATCTCCAGTACGGCTGGACGCTGTTCGTCGAACCGATGAACGAGAAACACCAGTGGGGTCGCGCCG CCATCCAGGTGGCCTTTACCATCTTCGTCGTATTCGAGACGTGGCTGGTCCCGGTGGAAGGCTGGTTCGTGGACAAGTTC GGACCGCGGCCTGTGGTGTTCATCGGCGGCATCCTGTGCGCCCTGTCCTGGGCTCTCAACTCGGTCGCCGCCAGCCTTCC CATGCTCTATGTCTCGGCGGCCCTCGGCGGCGCCGGCGCCGGCGCGGTCTATGGTACGGCCGTGGGCGCGGCGCTGAAGT GGTTCCCGGATCGCCGCGGCCTTGCCGCCGGCATCACCGCCGCCGGCTTCGGCGCCGGATCGGCCCTGACCATCGTGCCC ATCGCGGCCATGATCAAGGCGCAGGGCTACGAGCACACCTTCCTGTTCTTCGGCCTGATCCAGGGTGCCGTGGTGCTGGT GGCATCGCTGTTCCTGATGAGCCCGAAGCCCGGCCAGGTGCCGGCCGTCGCCGCCACCTCCACCACCCAGAGCCGTCGCA GCTATGGTCCGGGCGAGATGCTCAAGGCCCCGGTGTTCTGGGTCATGTATCTGATGTTCGTCCTGGTGGCCGCCGGCGGC CTGATGGCGACCGCCCAGCTCGGCTCCATCGCCAAGGACTTCAAGATCGCCGACGTGCCGGTCTCGATCCTGGGCCTGAC CCTGCCGGCCCTGACCTTCGCCTTGTCCATCGACCGGGTGCTGAACGGCGTGACCCGCCCGTTCTTCGGCTGGGTGTCGG ACAATATCGGGCGTGAGAACACCATGTTCATCGCCTTCTCGCTGGAAGCGGTGGGCGTGCTGGCTCTGGCCAAGTTCGGT GCCGACCCGATCGCGTTCGTGATCCTCACCGGCCTCGTCTTCTTCGCCTGGGGCGAGATCTACTCGCTGTTCCCGGCGAC GTGCGGCGATACCTTCGGCTCGCGCTTTGCCACCACCAACGCCGGCCTGCTCTACACCGCGAAGGGCACGGCCTCGCTCG TGGTGCCGCTGGCTTCGGTCGCGGTTGCCAAGCTCGGCAACTGGGACCTGGTGTTCATGCTGACGGCGGGCGTCAACGCC CTCGCCGCGCTCATGGCGCTCTTCGTCCTGAAGCCGCTGCGGACCCGGTTCGTGCTCCAAGCGGTAGCGAAGGAAGAGGT GGACGTCCCCAGCGCCAAGGTCGTCGGCTGA
Upstream 100 bases:
>100_bases GGTACGCGAGCGGGCTCGGTCAAGAAGGCCCGCATCAAGAATGGTGACCGTCACGGGCCGTTCATCGCTTTCGATGATCC CCAGTGAGAAAGGGAAGGAA
Downstream 100 bases:
>100_bases AGATTGCCCGATGGAACGGGGGCGGGGAAACCCGGCCCCGGCATCGGACTTCACCTTGGCCCACCTACCCCGGGCCTAAC TTGAGGGAGCGGCGTGCCGC
Product: major facilitator transporter
Products: NA
Alternate protein names: OFA; Oxalate:formate antiport protein; Oxalate:formate exchange protein [H]
Number of amino acids: Translated: 436; Mature: 435
Protein sequence:
>436_residues MSQNLSTPVRGPLGGRWMQLAIGVVCMSMIANLQYGWTLFVEPMNEKHQWGRAAIQVAFTIFVVFETWLVPVEGWFVDKF GPRPVVFIGGILCALSWALNSVAASLPMLYVSAALGGAGAGAVYGTAVGAALKWFPDRRGLAAGITAAGFGAGSALTIVP IAAMIKAQGYEHTFLFFGLIQGAVVLVASLFLMSPKPGQVPAVAATSTTQSRRSYGPGEMLKAPVFWVMYLMFVLVAAGG LMATAQLGSIAKDFKIADVPVSILGLTLPALTFALSIDRVLNGVTRPFFGWVSDNIGRENTMFIAFSLEAVGVLALAKFG ADPIAFVILTGLVFFAWGEIYSLFPATCGDTFGSRFATTNAGLLYTAKGTASLVVPLASVAVAKLGNWDLVFMLTAGVNA LAALMALFVLKPLRTRFVLQAVAKEEVDVPSAKVVG
Sequences:
>Translated_436_residues MSQNLSTPVRGPLGGRWMQLAIGVVCMSMIANLQYGWTLFVEPMNEKHQWGRAAIQVAFTIFVVFETWLVPVEGWFVDKF GPRPVVFIGGILCALSWALNSVAASLPMLYVSAALGGAGAGAVYGTAVGAALKWFPDRRGLAAGITAAGFGAGSALTIVP IAAMIKAQGYEHTFLFFGLIQGAVVLVASLFLMSPKPGQVPAVAATSTTQSRRSYGPGEMLKAPVFWVMYLMFVLVAAGG LMATAQLGSIAKDFKIADVPVSILGLTLPALTFALSIDRVLNGVTRPFFGWVSDNIGRENTMFIAFSLEAVGVLALAKFG ADPIAFVILTGLVFFAWGEIYSLFPATCGDTFGSRFATTNAGLLYTAKGTASLVVPLASVAVAKLGNWDLVFMLTAGVNA LAALMALFVLKPLRTRFVLQAVAKEEVDVPSAKVVG >Mature_435_residues SQNLSTPVRGPLGGRWMQLAIGVVCMSMIANLQYGWTLFVEPMNEKHQWGRAAIQVAFTIFVVFETWLVPVEGWFVDKFG PRPVVFIGGILCALSWALNSVAASLPMLYVSAALGGAGAGAVYGTAVGAALKWFPDRRGLAAGITAAGFGAGSALTIVPI AAMIKAQGYEHTFLFFGLIQGAVVLVASLFLMSPKPGQVPAVAATSTTQSRRSYGPGEMLKAPVFWVMYLMFVLVAAGGL MATAQLGSIAKDFKIADVPVSILGLTLPALTFALSIDRVLNGVTRPFFGWVSDNIGRENTMFIAFSLEAVGVLALAKFGA DPIAFVILTGLVFFAWGEIYSLFPATCGDTFGSRFATTNAGLLYTAKGTASLVVPLASVAVAKLGNWDLVFMLTAGVNAL AALMALFVLKPLRTRFVLQAVAKEEVDVPSAKVVG
Specific function: Anion transporter that carries out the exchange of divalent oxalate with monovalent formate, the product of oxalate decarboxylation, at the plasma membrane, and in doing so catalyzes the vectorial portion of a proton-motive metabolic cycle that drives ATP
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. OFA (TC 2.A.1.11) family [H]
Homologues:
Organism=Escherichia coli, GI1789969, Length=362, Percent_Identity=26.2430939226519, Blast_Score=99, Evalue=7e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR004741 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 45981; Mature: 45850
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: PS50850 MFS ; PS00456 NA_SOLUT_SYMP_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQNLSTPVRGPLGGRWMQLAIGVVCMSMIANLQYGWTLFVEPMNEKHQWGRAAIQVAFT CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHH IFVVFETWLVPVEGWFVDKFGPRPVVFIGGILCALSWALNSVAASLPMLYVSAALGGAGA HHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC GAVYGTAVGAALKWFPDRRGLAAGITAAGFGAGSALTIVPIAAMIKAQGYEHTFLFFGLI CHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHH QGAVVLVASLFLMSPKPGQVPAVAATSTTQSRRSYGPGEMLKAPVFWVMYLMFVLVAAGG HHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCC LMATAQLGSIAKDFKIADVPVSILGLTLPALTFALSIDRVLNGVTRPFFGWVSDNIGREN HHHHHHHHHHHHCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC TMFIAFSLEAVGVLALAKFGADPIAFVILTGLVFFAWGEIYSLFPATCGDTFGSRFATTN EEEEEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCHHHCCCCEECC AGLLYTAKGTASLVVPLASVAVAKLGNWDLVFMLTAGVNALAALMALFVLKPLRTRFVLQ CCEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH AVAKEEVDVPSAKVVG HHHHHHCCCCCCCCCC >Mature Secondary Structure SQNLSTPVRGPLGGRWMQLAIGVVCMSMIANLQYGWTLFVEPMNEKHQWGRAAIQVAFT CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHH IFVVFETWLVPVEGWFVDKFGPRPVVFIGGILCALSWALNSVAASLPMLYVSAALGGAGA HHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC GAVYGTAVGAALKWFPDRRGLAAGITAAGFGAGSALTIVPIAAMIKAQGYEHTFLFFGLI CHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHH QGAVVLVASLFLMSPKPGQVPAVAATSTTQSRRSYGPGEMLKAPVFWVMYLMFVLVAAGG HHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCC LMATAQLGSIAKDFKIADVPVSILGLTLPALTFALSIDRVLNGVTRPFFGWVSDNIGREN HHHHHHHHHHHHCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC TMFIAFSLEAVGVLALAKFGADPIAFVILTGLVFFAWGEIYSLFPATCGDTFGSRFATTN EEEEEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCHHHCCCCEECC AGLLYTAKGTASLVVPLASVAVAKLGNWDLVFMLTAGVNALAALMALFVLKPLRTRFVLQ CCEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH AVAKEEVDVPSAKVVG HHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8636101; 9651403; 11919184; 11113128; 11274108; 11500368 [H]