| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154245180
Identifier: 154245180
GI number: 154245180
Start: 1418102
End: 1418596
Strand: Direct
Name: 154245180
Synonym: Xaut_1232
Alternate gene names: NA
Gene position: 1418102-1418596 (Clockwise)
Preceding gene: 154245179
Following gene: 154245181
Centisome position: 26.71
GC content: 65.86
Gene sequence:
>495_bases ATGAGCGACAAGCCGGATGCGCGCCCCTCAGCCCGCCTCAGCGCGGTGACGCTCGACGACGCCTCCATCGGCCATTCCAG CGCCGACATCGACCACGAGCGCGCCACCGCCATCTGGGACCTCATCGAGGACAACAGCTTCGCCCCGTGCGGCGATCCGG GGGAGGGGCCCTATACGCTGCATATCTCGCTGATGGAGAGCCGCCTGGTGCTGGACATCAAGCGCGAGAGCGGCGAGCAG GTGGTGCAGCACCACCTGTCCCTCACCCCCTTCCGGAAGGTGGTGAAGGACTATTTCCTCGTCTGCGAGAGCTATTACAA CGCCATCCGGTCCGCTTCGCCGAGCCAGATCGAGGCCATCGACATGGGCCGGCGCGGTCTCCACAACGAGGGCTCGACGC TGCTGCAAGAGCGCCTCGAGGGCAAGGTCGATCTGGATTTCGACAGCGCCCGGCGCCTGTTCACGCTCATCTGCGCCCTG CACTGGAAAGGCTGA
Upstream 100 bases:
>100_bases CTCGGGCCGGCGGCCGTGCGCCTTGCGGCGGTGGAGCGGCTCGATGCCCACGGGCGGTCTGTCTCCATCCGCACCAACAG ATGATCGGAAGGACGAGGCG
Downstream 100 bases:
>100_bases GCGACCATGGAGCCGCCTGCGGCACCCAAGCGCTCGGCGCGGCCGCAATCGGTTCTCTTCATGTGTGGACAGAATGTGGT GCGCTCGGTGATGGCGCAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 164; Mature: 163
Protein sequence:
>164_residues MSDKPDARPSARLSAVTLDDASIGHSSADIDHERATAIWDLIEDNSFAPCGDPGEGPYTLHISLMESRLVLDIKRESGEQ VVQHHLSLTPFRKVVKDYFLVCESYYNAIRSASPSQIEAIDMGRRGLHNEGSTLLQERLEGKVDLDFDSARRLFTLICAL HWKG
Sequences:
>Translated_164_residues MSDKPDARPSARLSAVTLDDASIGHSSADIDHERATAIWDLIEDNSFAPCGDPGEGPYTLHISLMESRLVLDIKRESGEQ VVQHHLSLTPFRKVVKDYFLVCESYYNAIRSASPSQIEAIDMGRRGLHNEGSTLLQERLEGKVDLDFDSARRLFTLICAL HWKG >Mature_163_residues SDKPDARPSARLSAVTLDDASIGHSSADIDHERATAIWDLIEDNSFAPCGDPGEGPYTLHISLMESRLVLDIKRESGEQV VQHHLSLTPFRKVVKDYFLVCESYYNAIRSASPSQIEAIDMGRRGLHNEGSTLLQERLEGKVDLDFDSARRLFTLICALH WKG
Specific function: Unknown
COG id: COG5328
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0262 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1232_XANP2 (A7IEN8)
Other databases:
- EMBL: CP000781 - RefSeq: YP_001416138.1 - STRING: A7IEN8 - GeneID: 5422753 - GenomeReviews: CP000781_GR - KEGG: xau:Xaut_1232 - eggNOG: COG5328 - HOGENOM: HBG294171 - OMA: IDMARRG - ProtClustDB: PRK02853 - BioCyc: XAUT78245:XAUT_1232-MONOMER - HAMAP: MF_00678 - InterPro: IPR008321 - PIRSF: PIRSF032146
Pfam domain/function: PF06793 UPF0262
EC number: NA
Molecular weight: Translated: 18310; Mature: 18179
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDKPDARPSARLSAVTLDDASIGHSSADIDHERATAIWDLIEDNSFAPCGDPGEGPYTL CCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEE HISLMESRLVLDIKRESGEQVVQHHLSLTPFRKVVKDYFLVCESYYNAIRSASPSQIEAI EEEEECCEEEEEEHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH DMGRRGLHNEGSTLLQERLEGKVDLDFDSARRLFTLICALHWKG HHCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SDKPDARPSARLSAVTLDDASIGHSSADIDHERATAIWDLIEDNSFAPCGDPGEGPYTL CCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEE HISLMESRLVLDIKRESGEQVVQHHLSLTPFRKVVKDYFLVCESYYNAIRSASPSQIEAI EEEEECCEEEEEEHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH DMGRRGLHNEGSTLLQERLEGKVDLDFDSARRLFTLICALHWKG HHCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA