| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is hisD
Identifier: 154245179
GI number: 154245179
Start: 1416793
End: 1418085
Strand: Direct
Name: hisD
Synonym: Xaut_1231
Alternate gene names: 154245179
Gene position: 1416793-1418085 (Clockwise)
Preceding gene: 154245178
Following gene: 154245180
Centisome position: 26.69
GC content: 70.07
Gene sequence:
>1293_bases ATGCCGATCCGCCTCATCACAGAACAACCCGATTTTCCCGAGCGTTTCACCACCTTCCTCGGCTCCAAGCGCGAGGCCTC GGTGGACGTGCAGGAACAGGTGGCCACCATCATCGCCGACGTGCGCGCGCGGGGCGATGATGCTCTCATCGATCTGTCGC GCACCTTCGACCGGGTGGACCTTGCGAAGCTCGGCCTGCGCGTGACCGACGCGGAGCTGGACGCGGCCCTCGCCTCCATC CCGCCGGAAACCCGCGAAGCCCTCGCCTTCGCCAAGGCGCGCATCGAATCCCATCATGCCCGCCAGAAGCCGGCCGACGA CAGCTATCGCGACGCCGCCGGCGTCGTGCTGGGCCATCGCTGGACCAGCGTGGACGCGGTGGGCCTGTACGTGCCCGGCG GTACCGCGGCCTATCCCTCGTCCGTGCTCATGAATGCGGTGCCGGCGCAGGTCGCGGGCGTGCCGCGCATCGTCATGGTG GTTCCGGCCCCCGATGGCGAGATCGCGCCTTTGGTGCTTGCGGCGGCGCGCCTTGCCGGCGTGCACGAGGTCTATCGCGT TGGAGGCGCCCAGGCGGTGGCGGCACTGGCCTATGGCACGCAGACCATCCAGCCGGTGGACAAGATCGTCGGCCCCGGCA ACGCCTATGTGGCGGCCGCCAAGCGGCAGGTGTTCGGCAAGGTGGGCATCGACATGGTGGCCGGCCCCTCCGAGGTGCTG ATCCTCGCCGACGGGAACGCCAGCGCCGACTGGATCGCCGCCGACCTCCTCGCCCAGGCCGAGCACGACACCGCCGCCCA GTCCATCCTCATCACCGATTCGCACGAGCTGGCGGACCAGGTGGAGAAGGCGGTGGAGGGCATGCTGGCGACCCTGCCGC GCGTGGCCATCGCCTCCGCCTCGTGGCGCGACCATGGTGCCATCATCCTGGTGCCAGACCTCGCCTCCGCCATTCCGCTG GTGGACCGCATCGCGCCGGAGCACCTGGAGATCCACGCCGCCAACGCGGACGCGCTTGCGGCCAAGGTACGGCATGCGGG GGCGATCTTCGTGGGCGCCTTCACGCCGGAGGCCATCGGCGATTACGTCGGCGGCACCAACCACGTGCTCCCCACCGCCC GCTCGGCGCGCTTCTCCTCGGGCCTGTCCGTGCTCGATTTCATGAAGCGCACCTCCATCCTGAAGCTCGACGCCGGCGCG CTGGAACAGCTCGGGCCGGCGGCCGTGCGCCTTGCGGCGGTGGAGCGGCTCGATGCCCACGGGCGGTCTGTCTCCATCCG CACCAACAGATGA
Upstream 100 bases:
>100_bases AGGGTTCCGCTGCTTGAGCGGAGCCACGGAAGCGCCGGCGCGGCGCGGCACGGTGACCGCGGGGCTTCCCTCGCGGGCGA AGCTGCTCTAGCAAGGCGTC
Downstream 100 bases:
>100_bases TCGGAAGGACGAGGCGATGAGCGACAAGCCGGATGCGCGCCCCTCAGCCCGCCTCAGCGCGGTGACGCTCGACGACGCCT CCATCGGCCATTCCAGCGCC
Product: histidinol dehydrogenase
Products: NA
Alternate protein names: HDH [H]
Number of amino acids: Translated: 430; Mature: 429
Protein sequence:
>430_residues MPIRLITEQPDFPERFTTFLGSKREASVDVQEQVATIIADVRARGDDALIDLSRTFDRVDLAKLGLRVTDAELDAALASI PPETREALAFAKARIESHHARQKPADDSYRDAAGVVLGHRWTSVDAVGLYVPGGTAAYPSSVLMNAVPAQVAGVPRIVMV VPAPDGEIAPLVLAAARLAGVHEVYRVGGAQAVAALAYGTQTIQPVDKIVGPGNAYVAAAKRQVFGKVGIDMVAGPSEVL ILADGNASADWIAADLLAQAEHDTAAQSILITDSHELADQVEKAVEGMLATLPRVAIASASWRDHGAIILVPDLASAIPL VDRIAPEHLEIHAANADALAAKVRHAGAIFVGAFTPEAIGDYVGGTNHVLPTARSARFSSGLSVLDFMKRTSILKLDAGA LEQLGPAAVRLAAVERLDAHGRSVSIRTNR
Sequences:
>Translated_430_residues MPIRLITEQPDFPERFTTFLGSKREASVDVQEQVATIIADVRARGDDALIDLSRTFDRVDLAKLGLRVTDAELDAALASI PPETREALAFAKARIESHHARQKPADDSYRDAAGVVLGHRWTSVDAVGLYVPGGTAAYPSSVLMNAVPAQVAGVPRIVMV VPAPDGEIAPLVLAAARLAGVHEVYRVGGAQAVAALAYGTQTIQPVDKIVGPGNAYVAAAKRQVFGKVGIDMVAGPSEVL ILADGNASADWIAADLLAQAEHDTAAQSILITDSHELADQVEKAVEGMLATLPRVAIASASWRDHGAIILVPDLASAIPL VDRIAPEHLEIHAANADALAAKVRHAGAIFVGAFTPEAIGDYVGGTNHVLPTARSARFSSGLSVLDFMKRTSILKLDAGA LEQLGPAAVRLAAVERLDAHGRSVSIRTNR >Mature_429_residues PIRLITEQPDFPERFTTFLGSKREASVDVQEQVATIIADVRARGDDALIDLSRTFDRVDLAKLGLRVTDAELDAALASIP PETREALAFAKARIESHHARQKPADDSYRDAAGVVLGHRWTSVDAVGLYVPGGTAAYPSSVLMNAVPAQVAGVPRIVMVV PAPDGEIAPLVLAAARLAGVHEVYRVGGAQAVAALAYGTQTIQPVDKIVGPGNAYVAAAKRQVFGKVGIDMVAGPSEVLI LADGNASADWIAADLLAQAEHDTAAQSILITDSHELADQVEKAVEGMLATLPRVAIASASWRDHGAIILVPDLASAIPLV DRIAPEHLEIHAANADALAAKVRHAGAIFVGAFTPEAIGDYVGGTNHVLPTARSARFSSGLSVLDFMKRTSILKLDAGAL EQLGPAAVRLAAVERLDAHGRSVSIRTNR
Specific function: Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine [H]
COG id: COG0141
COG function: function code E; Histidinol dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the histidinol dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1788331, Length=407, Percent_Identity=42.2604422604423, Blast_Score=298, Evalue=7e-82, Organism=Saccharomyces cerevisiae, GI6319819, Length=415, Percent_Identity=39.2771084337349, Blast_Score=268, Evalue=1e-72,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016161 - InterPro: IPR022695 - InterPro: IPR001692 - InterPro: IPR012131 [H]
Pfam domain/function: PF00815 Histidinol_dh [H]
EC number: =1.1.1.23 [H]
Molecular weight: Translated: 45152; Mature: 45021
Theoretical pI: Translated: 5.76; Mature: 5.76
Prosite motif: PS00611 HISOL_DEHYDROGENASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIRLITEQPDFPERFTTFLGSKREASVDVQEQVATIIADVRARGDDALIDLSRTFDRVD CCEEEECCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHH LAKLGLRVTDAELDAALASIPPETREALAFAKARIESHHARQKPADDSYRDAAGVVLGHR HHHHCCEEECHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCEEEECC WTSVDAVGLYVPGGTAAYPSSVLMNAVPAQVAGVPRIVMVVPAPDGEIAPLVLAAARLAG CCCCCEEEEEECCCCCCCCHHHHHHHCCHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHH VHEVYRVGGAQAVAALAYGTQTIQPVDKIVGPGNAYVAAAKRQVFGKVGIDMVAGPSEVL HHHHHHCCCHHHHHHHHHCCCHHHHHHHHCCCCCCEEHHHHHHHHHHCCCEEECCCCEEE ILADGNASADWIAADLLAQAEHDTAAQSILITDSHELADQVEKAVEGMLATLPRVAIASA EEECCCCCCHHHHHHHHHHCCCCHHHCEEEEECCHHHHHHHHHHHHHHHHHCCHHHHCCC SWRDHGAIILVPDLASAIPLVDRIAPEHLEIHAANADALAAKVRHAGAIFVGAFTPEAIG CCCCCCCEEEECCHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHCCEEEEECCCHHHHH DYVGGTNHVLPTARSARFSSGLSVLDFMKRTSILKLDAGALEQLGPAAVRLAAVERLDAH HHCCCCCCCCCCCHHHHHHCCCHHHHHHHHHCEEEECCHHHHHCCHHHHHHHHHHHHHCC GRSVSIRTNR CCEEEEEECC >Mature Secondary Structure PIRLITEQPDFPERFTTFLGSKREASVDVQEQVATIIADVRARGDDALIDLSRTFDRVD CEEEECCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHH LAKLGLRVTDAELDAALASIPPETREALAFAKARIESHHARQKPADDSYRDAAGVVLGHR HHHHCCEEECHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCEEEECC WTSVDAVGLYVPGGTAAYPSSVLMNAVPAQVAGVPRIVMVVPAPDGEIAPLVLAAARLAG CCCCCEEEEEECCCCCCCCHHHHHHHCCHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHH VHEVYRVGGAQAVAALAYGTQTIQPVDKIVGPGNAYVAAAKRQVFGKVGIDMVAGPSEVL HHHHHHCCCHHHHHHHHHCCCHHHHHHHHCCCCCCEEHHHHHHHHHHCCCEEECCCCEEE ILADGNASADWIAADLLAQAEHDTAAQSILITDSHELADQVEKAVEGMLATLPRVAIASA EEECCCCCCHHHHHHHHHHCCCCHHHCEEEEECCHHHHHHHHHHHHHHHHHCCHHHHCCC SWRDHGAIILVPDLASAIPLVDRIAPEHLEIHAANADALAAKVRHAGAIFVGAFTPEAIG CCCCCCCEEEECCHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHCCEEEEECCCHHHHH DYVGGTNHVLPTARSARFSSGLSVLDFMKRTSILKLDAGALEQLGPAAVRLAAVERLDAH HHCCCCCCCCCCCHHHHHHCCCHHHHHHHHHCEEEECCHHHHHCCHHHHHHHHHHHHHCC GRSVSIRTNR CCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA