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The map label for this gene is yhiU [C]

Identifier: 154245097

GI number: 154245097

Start: 1321887

End: 1323167

Strand: Reverse

Name: yhiU [C]

Synonym: Xaut_1149

Alternate gene names: 154245097

Gene position: 1323167-1321887 (Counterclockwise)

Preceding gene: 154245098

Following gene: 154245096

Centisome position: 24.92

GC content: 72.76

Gene sequence:

>1281_bases
GTGGTCTCGCCCCACGGTCCCGCCCCGATCCGGAAAGAGGCTTCCCTCATCATGTACGCCACCGTCCGTCCTGCGACCCG
CGCCGCGTTGGCGGCGGCCGTTCTCCTCGCCTGCGCCGCGGCGCCCGGCGGCGGCGTCCTGGCGGCGGAGCCGGCCAAGG
CCGCCGAAAGCCCGGCGCCCAAGGCGCCGCCTGCGCTGTCGGTGACGGTGGTGAAGCCCAGGCCCGACACCATGACCGAC
ACCCTCCTCGTCACCGGCACCCTGAAGCCGCGCGAGGAGATCGAGGTGGGCCCCGAGATCGAGGGCTACCGCCTCATGGA
GATCCTGGTGGAAGCCGGCGACAAGGTGGAGAAGGGACAGGTGCTGGCCCGCCTCTCCCGCGAGGTGCTGGAGACCCAGC
TGGCCCAGAACACCGCCTCCGCCGCCAAGGCCCGCGCAGCCATCGCCCAGCAGCGTGCCGCCCTGGACCAGGTCATCGCC
CAGGAGACCGAGGCCACCGCGGCAGTGGAGCGCACCCGGCAGCTGCGCAAGACCGGCACCTCCTCCCAGGAGCAGCTGGA
CGAGCGCGAGCGCGCCATGAAGGTGGCCACCGCCCAGGTCGCCGCCGCCCGCGAGACCCTGATCGCCGCCGAGGCGGAAG
CGGTCTTCGTGAAGGCACAGCGCGACGAGCTGGAGGTGAAGATGAAGCGCACCGATGTGCGCGCCCCCGCCGCCGGCCTC
ATCCTGTCGCGGGAAGCGCGGCTCGGCGCCATCGCCCTCTCCACCCGCGCCGCGCCCCTGTTCCGCATCGCCGAGGACGG
CGCCATGGACCTTCAGGCGGACGTGCCCGAAAGCGCCATGCCGCGCATGAAGGACGGCCTCATTGCGCAGGTGCAGCCTG
CCGGCTTCGATGCACCGCTGGACGGCAAGGTGCGCCTCGTCTCCGCCGAGGTGGACCGCGCCTCGCGGCTCGGCACGGTG
AAGATCGCCCTGCCCGACGACCCGCGCCTGAAATCGGGCGCCTATGGCCGCGCCGTCATCAACCTCGGCGAGGTGAAGGG
GCTCACCGTGCCCCAGTCCGCCGTCATGTTCGATGCCGACGGGGCCTATGTGCTGACCGTCACCGACGGCATCATCGGCG
TGCGGCGCATCGTGGCCGGCCTCAAGAAGAGCGGGCGCATCCTTGTCGCCAGCGGGCTTGGCGCCGACGACGCCGTGGTG
GCGCGCGCCGGCAGCTTCCTGCGCGACGGCGACCGGGTAACCCCGGTCACCCAGCCGCTCTCCCTGGGCGAGGCACGCTG
A

Upstream 100 bases:

>100_bases
TCGCGCCCGATGCCCCGGTGCCGGCGGAGGCTAAAGCGTGACCGCAATGCCACAGCCCCTCGCAAGCGGTGCCGCAGCCG
CCTTCCGTCACGTTAATGCC

Downstream 100 bases:

>100_bases
TGGCCGTCAACGTCTCCGCCTGGGCGATCCGCAAGCCGGTCCCCTCTCTCGTCTTCTTCTTCATCCTGGTGGTGCTGGGC
ATCGTGCACTTCCGCGGCCT

Product: RND family efflux transporter MFP subunit

Products: NA

Alternate protein names: Efflux Transporter RND Family MFP Subunit; Secretion Protein HlyD; HlyD Family Secretion Protein; Efflux Cation Transporter Protein; Membrane Fusion Protein; Secretion Protein Hlyd; Transporter Lipoprotein Transmembrane; Membrane-Fusion Protein; Efflux Transporter Rnd Family Mfp Subunit; AcrA Protein; RND Family Efflux Transporter; RND Efflux Membrane Fusion Protein; Multidrug Resistance Efflux Pump Periplasmic Component; Protein Secretion Protein; Component Of Multidrug Efflux System; RND Family Efflux Pump Membrane Fusion Lipoprotein; Signal Peptide; HlyD/ACR Family Transporter Component; HlyD-Family Secretion Protein; Cation-Efflux System Protein; Auxiliary Transport Protein MFP Family; Cation-Efflux System Signal Peptide Protein; Efflux Protein; HlyD Family Multidrug Efflux Protein; RND Family Efflux Transporter Subunit MFP; Transcriptional Regulator Fis Family; Secretion Protein; Transport Transmembrane Protein; Secretion HlyD Protein; Fis Family Transcriptional Regulator

Number of amino acids: Translated: 426; Mature: 426

Protein sequence:

>426_residues
MVSPHGPAPIRKEASLIMYATVRPATRAALAAAVLLACAAAPGGGVLAAEPAKAAESPAPKAPPALSVTVVKPRPDTMTD
TLLVTGTLKPREEIEVGPEIEGYRLMEILVEAGDKVEKGQVLARLSREVLETQLAQNTASAAKARAAIAQQRAALDQVIA
QETEATAAVERTRQLRKTGTSSQEQLDERERAMKVATAQVAAARETLIAAEAEAVFVKAQRDELEVKMKRTDVRAPAAGL
ILSREARLGAIALSTRAAPLFRIAEDGAMDLQADVPESAMPRMKDGLIAQVQPAGFDAPLDGKVRLVSAEVDRASRLGTV
KIALPDDPRLKSGAYGRAVINLGEVKGLTVPQSAVMFDADGAYVLTVTDGIIGVRRIVAGLKKSGRILVASGLGADDAVV
ARAGSFLRDGDRVTPVTQPLSLGEAR

Sequences:

>Translated_426_residues
MVSPHGPAPIRKEASLIMYATVRPATRAALAAAVLLACAAAPGGGVLAAEPAKAAESPAPKAPPALSVTVVKPRPDTMTD
TLLVTGTLKPREEIEVGPEIEGYRLMEILVEAGDKVEKGQVLARLSREVLETQLAQNTASAAKARAAIAQQRAALDQVIA
QETEATAAVERTRQLRKTGTSSQEQLDERERAMKVATAQVAAARETLIAAEAEAVFVKAQRDELEVKMKRTDVRAPAAGL
ILSREARLGAIALSTRAAPLFRIAEDGAMDLQADVPESAMPRMKDGLIAQVQPAGFDAPLDGKVRLVSAEVDRASRLGTV
KIALPDDPRLKSGAYGRAVINLGEVKGLTVPQSAVMFDADGAYVLTVTDGIIGVRRIVAGLKKSGRILVASGLGADDAVV
ARAGSFLRDGDRVTPVTQPLSLGEAR
>Mature_426_residues
MVSPHGPAPIRKEASLIMYATVRPATRAALAAAVLLACAAAPGGGVLAAEPAKAAESPAPKAPPALSVTVVKPRPDTMTD
TLLVTGTLKPREEIEVGPEIEGYRLMEILVEAGDKVEKGQVLARLSREVLETQLAQNTASAAKARAAIAQQRAALDQVIA
QETEATAAVERTRQLRKTGTSSQEQLDERERAMKVATAQVAAARETLIAAEAEAVFVKAQRDELEVKMKRTDVRAPAAGL
ILSREARLGAIALSTRAAPLFRIAEDGAMDLQADVPESAMPRMKDGLIAQVQPAGFDAPLDGKVRLVSAEVDRASRLGTV
KIALPDDPRLKSGAYGRAVINLGEVKGLTVPQSAVMFDADGAYVLTVTDGIIGVRRIVAGLKKSGRILVASGLGADDAVV
ARAGSFLRDGDRVTPVTQPLSLGEAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Attached To The Inner Membrane By A Lipid Anchor [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789929, Length=397, Percent_Identity=25.1889168765743, Blast_Score=63, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44637; Mature: 44637

Theoretical pI: Translated: 9.34; Mature: 9.34

Prosite motif: PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSPHGPAPIRKEASLIMYATVRPATRAALAAAVLLACAAAPGGGVLAAEPAKAAESPAP
CCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCEEEECCHHHCCCCCC
KAPPALSVTVVKPRPDTMTDTLLVTGTLKPREEIEVGPEIEGYRLMEILVEAGDKVEKGQ
CCCCCEEEEEECCCCCCCCCEEEEEECCCCHHHCCCCCCCCCHHHHHHHHHCCCCCHHHH
VLARLSREVLETQLAQNTASAAKARAAIAQQRAALDQVIAQETEATAAVERTRQLRKTGT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SSQEQLDERERAMKVATAQVAAARETLIAAEAEAVFVKAQRDELEVKMKRTDVRAPAAGL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEEHHCCCCCHHCE
ILSREARLGAIALSTRAAPLFRIAEDGAMDLQADVPESAMPRMKDGLIAQVQPAGFDAPL
EEECCCCCCEEEEECCCCCEEEEECCCCCCEECCCCHHHCCHHHCCCEEEECCCCCCCCC
DGKVRLVSAEVDRASRLGTVKIALPDDPRLKSGAYGRAVINLGEVKGLTVPQSAVMFDAD
CCCEEEEEECCCHHHCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEECC
GAYVLTVTDGIIGVRRIVAGLKKSGRILVASGLGADDAVVARAGSFLRDGDRVTPVTQPL
CCEEEEECCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHCCHHHCCCCCCCCCCCCC
SLGEAR
CCCCCC
>Mature Secondary Structure
MVSPHGPAPIRKEASLIMYATVRPATRAALAAAVLLACAAAPGGGVLAAEPAKAAESPAP
CCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCEEEECCHHHCCCCCC
KAPPALSVTVVKPRPDTMTDTLLVTGTLKPREEIEVGPEIEGYRLMEILVEAGDKVEKGQ
CCCCCEEEEEECCCCCCCCCEEEEEECCCCHHHCCCCCCCCCHHHHHHHHHCCCCCHHHH
VLARLSREVLETQLAQNTASAAKARAAIAQQRAALDQVIAQETEATAAVERTRQLRKTGT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SSQEQLDERERAMKVATAQVAAARETLIAAEAEAVFVKAQRDELEVKMKRTDVRAPAAGL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEEHHCCCCCHHCE
ILSREARLGAIALSTRAAPLFRIAEDGAMDLQADVPESAMPRMKDGLIAQVQPAGFDAPL
EEECCCCCCEEEEECCCCCEEEEECCCCCCEECCCCHHHCCHHHCCCEEEECCCCCCCCC
DGKVRLVSAEVDRASRLGTVKIALPDDPRLKSGAYGRAVINLGEVKGLTVPQSAVMFDAD
CCCEEEEEECCCHHHCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEECC
GAYVLTVTDGIIGVRRIVAGLKKSGRILVASGLGADDAVVARAGSFLRDGDRVTPVTQPL
CCEEEEECCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHCCHHHCCCCCCCCCCCCC
SLGEAR
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA