Click here to switch to the map view.

The map label for this gene is 154245055

Identifier: 154245055

GI number: 154245055

Start: 1277918

End: 1278577

Strand: Reverse

Name: 154245055

Synonym: Xaut_1107

Alternate gene names: NA

Gene position: 1278577-1277918 (Counterclockwise)

Preceding gene: 154245056

Following gene: 154245053

Centisome position: 24.08

GC content: 71.06

Gene sequence:

>660_bases
GTGAGAGCGCCCATCGCCGACCCGCTCGCCTTCATCCGCGCCGAAACCCGCCTCAACCCGGTGCCGCTGGTGCCGGAAAT
CTCGCTCCATGTGGCCGACGAGGCCGTGCCCCTCTGGCAGCGCACCGAGGAGGAACTGGGCGAGATGGGCCTGCCGCCGC
CGTTCTGGGCCTTCGCCTGGGCCGGCGGGCAGGCGCTGGCCCGCCACGTGCTCGACCATCCCGAAGCGGTGGCGGGCCGG
ACCGTGCTGGATTTCGCCTCCGGCTCCGGCCTCGTGGGCATCGCCGCCATGAAGGCGGGGGCGGCGGCCGTCACCTGCGC
CGACATCGACCCGTTCGCCCGCGCCGCCATCGGTCTCAACGGGCAGGCCAACGGCGTGGTGCTCACCGCCGCTGAGCAGG
ACCTCATCGGCACGGACGAAGGCTGGGATACCGTGCTCGCCGGCGATATCGCCTATGAGAAGGACCTCTCCGCGCGGGTG
TTCGACTGGCTGCTGGCCCTCAGCGCGCGCGGCGCCACCGTGCTCATCGGCGATCCCGGCCGCACCTATTTGCCGAAGGA
CCGGCTGGAGCATCTCGCCGAATACAGCGTGCCGGTGACCCGGGAGCTGGAGGACATGGAGATCAAGCGCACCAGCGTCT
GGCGCCCCAGAGAGGGTTAA

Upstream 100 bases:

>100_bases
AGCCTAGGCTTCAGGAGATGGCGCTCATCAAGTTCTCCCGCCTGTCGGTGCAGCCGGTGAGCGACGAGGAATGGGACATC
GTCTGCGGGATGGGCGGGGT

Downstream 100 bases:

>100_bases
GCCTCACACCGCTCAGCACGGCCCCTCCGGCTTGCTGCAGAAGGCCCTGTGCAGCGCCTCGATGATATGGAGCACCTCCT
CGCGGGCGATGCGGTAGTGC

Product: hypothetical protein

Products: NA

Alternate protein names: Methyltransferase Small; Methyltransferase Protein; Methyltransferase; SAM-Dependent Methyltransferease Protein; Methyltransferase-Like Protein; C12orf72 Protein

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MRAPIADPLAFIRAETRLNPVPLVPEISLHVADEAVPLWQRTEEELGEMGLPPPFWAFAWAGGQALARHVLDHPEAVAGR
TVLDFASGSGLVGIAAMKAGAAAVTCADIDPFARAAIGLNGQANGVVLTAAEQDLIGTDEGWDTVLAGDIAYEKDLSARV
FDWLLALSARGATVLIGDPGRTYLPKDRLEHLAEYSVPVTRELEDMEIKRTSVWRPREG

Sequences:

>Translated_219_residues
MRAPIADPLAFIRAETRLNPVPLVPEISLHVADEAVPLWQRTEEELGEMGLPPPFWAFAWAGGQALARHVLDHPEAVAGR
TVLDFASGSGLVGIAAMKAGAAAVTCADIDPFARAAIGLNGQANGVVLTAAEQDLIGTDEGWDTVLAGDIAYEKDLSARV
FDWLLALSARGATVLIGDPGRTYLPKDRLEHLAEYSVPVTRELEDMEIKRTSVWRPREG
>Mature_219_residues
MRAPIADPLAFIRAETRLNPVPLVPEISLHVADEAVPLWQRTEEELGEMGLPPPFWAFAWAGGQALARHVLDHPEAVAGR
TVLDFASGSGLVGIAAMKAGAAAVTCADIDPFARAAIGLNGQANGVVLTAAEQDLIGTDEGWDTVLAGDIAYEKDLSARV
FDWLLALSARGATVLIGDPGRTYLPKDRLEHLAEYSVPVTRELEDMEIKRTSVWRPREG

Specific function: Unknown

COG id: COG3897

COG function: function code R; Predicted methyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI209529731, Length=213, Percent_Identity=33.8028169014084, Blast_Score=113, Evalue=1e-25,
Organism=Homo sapiens, GI209529729, Length=213, Percent_Identity=33.8028169014084, Blast_Score=113, Evalue=1e-25,
Organism=Homo sapiens, GI28603834, Length=213, Percent_Identity=33.8028169014084, Blast_Score=113, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI115533699, Length=197, Percent_Identity=32.48730964467, Blast_Score=103, Evalue=1e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23528; Mature: 23528

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAPIADPLAFIRAETRLNPVPLVPEISLHVADEAVPLWQRTEEELGEMGLPPPFWAFAW
CCCCCCCHHHHHHHHCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHH
AGGQALARHVLDHPEAVAGRTVLDFASGSGLVGIAAMKAGAAAVTCADIDPFARAAIGLN
CCHHHHHHHHHCCCHHHHCCEEEEECCCCCEEEEEECCCCCEEEEECCCCHHHHHHCCCC
GQANGVVLTAAEQDLIGTDEGWDTVLAGDIAYEKDLSARVFDWLLALSARGATVLIGDPG
CCCCCEEEEECCCCCCCCCCCCCEEEECCCHHCCCCHHHHHHHHHHHHCCCCEEEEECCC
RTYLPKDRLEHLAEYSVPVTRELEDMEIKRTSVWRPREG
CCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MRAPIADPLAFIRAETRLNPVPLVPEISLHVADEAVPLWQRTEEELGEMGLPPPFWAFAW
CCCCCCCHHHHHHHHCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHH
AGGQALARHVLDHPEAVAGRTVLDFASGSGLVGIAAMKAGAAAVTCADIDPFARAAIGLN
CCHHHHHHHHHCCCHHHHCCEEEEECCCCCEEEEEECCCCCEEEEECCCCHHHHHHCCCC
GQANGVVLTAAEQDLIGTDEGWDTVLAGDIAYEKDLSARVFDWLLALSARGATVLIGDPG
CCCCCEEEEECCCCCCCCCCCCCEEEECCCHHCCCCHHHHHHHHHHHHCCCCEEEEECCC
RTYLPKDRLEHLAEYSVPVTRELEDMEIKRTSVWRPREG
CCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA