Click here to switch to the map view.

The map label for this gene is 154245056

Identifier: 154245056

GI number: 154245056

Start: 1278574

End: 1279065

Strand: Reverse

Name: 154245056

Synonym: Xaut_1108

Alternate gene names: NA

Gene position: 1279065-1278574 (Counterclockwise)

Preceding gene: 154245059

Following gene: 154245055

Centisome position: 24.09

GC content: 61.59

Gene sequence:

>492_bases
ATGCACTTGCCAACACACTTGCCAAGCCGGGAGGGAAGAGGCAAACCCGCACCATCATTGCGAAACACGAGCTTTGCCAT
GGCCCATTGGCTCTATAAGTCCGAACCCTTCAAATGGTCGTGGGACATGCAGGTAAAGGCCGGCGCCAAGGGCACCCACT
GGGACGGGGTGCGCAACCACCTCGCCAAGCAGCAGCTGCTGGCCATGAAGAAGGGCGACCGGGGCTTCTTCTACCATTCC
AACGAGGGCAAGGAGATCGTCGGCATCGTGGAGGTCATCAAGGAGGCCTATCCCGACCCCTCCGACCCCTCCGGCAAATT
CTTCATGGTGGACATCAAGGCGGTGAAGCCGCTGAAGACCCCGGTGACGCTCGCCGCCGTCAAGGCCGAGCCTAGGCTTC
AGGAGATGGCGCTCATCAAGTTCTCCCGCCTGTCGGTGCAGCCGGTGAGCGACGAGGAATGGGACATCGTCTGCGGGATG
GGCGGGGTGTGA

Upstream 100 bases:

>100_bases
TTTTCCTTCACAGCGACGGCCCGTCCGCGCCGCCGCGCGGGACATTAAGGCTTCGCCCCGCCGAGGCAAGATTGCCCGGC
ACCGGCCCGCAAGCCTGCCA

Downstream 100 bases:

>100_bases
GAGCGCCCATCGCCGACCCGCTCGCCTTCATCCGCGCCGAAACCCGCCTCAACCCGGTGCCGCTGGTGCCGGAAATCTCG
CTCCATGTGGCCGACGAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MHLPTHLPSREGRGKPAPSLRNTSFAMAHWLYKSEPFKWSWDMQVKAGAKGTHWDGVRNHLAKQQLLAMKKGDRGFFYHS
NEGKEIVGIVEVIKEAYPDPSDPSGKFFMVDIKAVKPLKTPVTLAAVKAEPRLQEMALIKFSRLSVQPVSDEEWDIVCGM
GGV

Sequences:

>Translated_163_residues
MHLPTHLPSREGRGKPAPSLRNTSFAMAHWLYKSEPFKWSWDMQVKAGAKGTHWDGVRNHLAKQQLLAMKKGDRGFFYHS
NEGKEIVGIVEVIKEAYPDPSDPSGKFFMVDIKAVKPLKTPVTLAAVKAEPRLQEMALIKFSRLSVQPVSDEEWDIVCGM
GGV
>Mature_163_residues
MHLPTHLPSREGRGKPAPSLRNTSFAMAHWLYKSEPFKWSWDMQVKAGAKGTHWDGVRNHLAKQQLLAMKKGDRGFFYHS
NEGKEIVGIVEVIKEAYPDPSDPSGKFFMVDIKAVKPLKTPVTLAAVKAEPRLQEMALIKFSRLSVQPVSDEEWDIVCGM
GGV

Specific function: Unknown

COG id: COG2947

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI83267861, Length=174, Percent_Identity=37.3563218390805, Blast_Score=92, Evalue=2e-19,
Organism=Homo sapiens, GI40806221, Length=174, Percent_Identity=37.3563218390805, Blast_Score=92, Evalue=2e-19,
Organism=Homo sapiens, GI7661804, Length=174, Percent_Identity=37.3563218390805, Blast_Score=92, Evalue=2e-19,
Organism=Homo sapiens, GI83267859, Length=91, Percent_Identity=45.0549450549451, Blast_Score=66, Evalue=1e-11,
Organism=Homo sapiens, GI40806219, Length=91, Percent_Identity=45.0549450549451, Blast_Score=66, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18272; Mature: 18272

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHLPTHLPSREGRGKPAPSLRNTSFAMAHWLYKSEPFKWSWDMQVKAGAKGTHWDGVRNH
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEECEEEECCCCCCCCHHHHHH
LAKQQLLAMKKGDRGFFYHSNEGKEIVGIVEVIKEAYPDPSDPSGKFFMVDIKAVKPLKT
HHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCC
PVTLAAVKAEPRLQEMALIKFSRLSVQPVSDEEWDIVCGMGGV
CEEEEEECCCCCHHHHHHHHHHCCEECCCCCCCCEEEECCCCC
>Mature Secondary Structure
MHLPTHLPSREGRGKPAPSLRNTSFAMAHWLYKSEPFKWSWDMQVKAGAKGTHWDGVRNH
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEECEEEECCCCCCCCHHHHHH
LAKQQLLAMKKGDRGFFYHSNEGKEIVGIVEVIKEAYPDPSDPSGKFFMVDIKAVKPLKT
HHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCC
PVTLAAVKAEPRLQEMALIKFSRLSVQPVSDEEWDIVCGMGGV
CEEEEEECCCCCHHHHHHHHHHCCEECCCCCCCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA