BacMap

Definition	Xanthobacter autotrophicus Py2 chromosome, complete genome.
Accession	NC_009720
Length	5,308,934

Click here to switch to the map view.

The map label for this gene is fabG [H]

Identifier: 154245004

GI number: 154245004

Start: 1207568

End: 1208296

Strand: Direct

Name: fabG [H]

Synonym: Xaut_1054

Alternate gene names: 154245004

Gene position: 1207568-1208296 (Clockwise)

Preceding gene: 154245002

Following gene: 154245008

Centisome position: 22.75

GC content: 57.89

Gene sequence:

>729_bases
ATGGAAACCAATGAGATTATTGCCTTGGTCAGCGGTGCCAATCGCGGCATCGGCTTGGCCATTGCGGCTGGGCTCGCGCG
CCGCAAAGGTGTCAACGTGCTGCTTGGGTGCCGCGATCTTGACCGAGGAAAGACGGCGAGCCTCCCGCTGCTCGCGGAAG
GGCTCCGGGTCCGGCCGGTCCAACTGGACGCAACGGACGAAGCCAGCGTATCGTCGCTTGCTCATTTTATAGAGAATGAA
TACGGGCGCCTTGACGCGCTCGTCAACAATGCCGGAATTGGTTTAGACTACGATCCATCACTGTCGGTTGTTGAGCGAAT
TCAGAAAACACTAGATGTCAACGTCGTCGGCGCCCTGCGCCTTACAGAGGCGATGGTCCCATTGCTGGCGAAATCCACCC
GCCCTCGGATCGTCAACGTATCCTCTGAACTCAGTTCGTTTGGGCTGCGCGCAGATCCGGACTGGGCCTATCGCGACTTC
AGGCTTCCCACCTATGCGGCATCCAAAGCGGCGCTCAATTCGCTCACGCTCAGCTATGCGCAGCAGTTGAAGGATAAGGG
CTTTAAGGTCAACGCCATTTGCCCAGGCTACACGGCCACCGAGGCGACCAACTTTGCGGGGACACGCACGCCCGAACAGG
CGGCGGTGATTGCTGTTAAATTCGCATTGCTCGACAATGAGGGACCGAACGGCATTTTCGTCAATGAAGTGCAGGAACTG
CCTTGGTAA

Upstream 100 bases:

>100_bases
TGCAAGCCCTTTGGCCAAGCACGGCTGAAGAGTCTTTCGCGTTGGCGACCGCGTCCGTAAGAAGGACCGGCCCGACGCAA
GCTCGTACGGGACGGACAAA

Downstream 100 bases:

>100_bases
GATGATTTAGGTGGAGCCCAACAGGGCTTGAGGCCGGCGTGGAAACCTCCGTCGGCAGTCTGGGTGCAAGCGACCCGGGA
CCGGCGCCGTGCCGGTCCCG

Product: short-chain dehydrogenase/reductase SDR

Products: NA

Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
METNEIIALVSGANRGIGLAIAAGLARRKGVNVLLGCRDLDRGKTASLPLLAEGLRVRPVQLDATDEASVSSLAHFIENE
YGRLDALVNNAGIGLDYDPSLSVVERIQKTLDVNVVGALRLTEAMVPLLAKSTRPRIVNVSSELSSFGLRADPDWAYRDF
RLPTYAASKAALNSLTLSYAQQLKDKGFKVNAICPGYTATEATNFAGTRTPEQAAVIAVKFALLDNEGPNGIFVNEVQEL
PW

Sequences:

>Translated_242_residues
METNEIIALVSGANRGIGLAIAAGLARRKGVNVLLGCRDLDRGKTASLPLLAEGLRVRPVQLDATDEASVSSLAHFIENE
YGRLDALVNNAGIGLDYDPSLSVVERIQKTLDVNVVGALRLTEAMVPLLAKSTRPRIVNVSSELSSFGLRADPDWAYRDF
RLPTYAASKAALNSLTLSYAQQLKDKGFKVNAICPGYTATEATNFAGTRTPEQAAVIAVKFALLDNEGPNGIFVNEVQEL
PW
>Mature_242_residues
METNEIIALVSGANRGIGLAIAAGLARRKGVNVLLGCRDLDRGKTASLPLLAEGLRVRPVQLDATDEASVSSLAHFIENE
YGRLDALVNNAGIGLDYDPSLSVVERIQKTLDVNVVGALRLTEAMVPLLAKSTRPRIVNVSSELSSFGLRADPDWAYRDF
RLPTYAASKAALNSLTLSYAQQLKDKGFKVNAICPGYTATEATNFAGTRTPEQAAVIAVKFALLDNEGPNGIFVNEVQEL
PW

Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI4502599, Length=280, Percent_Identity=33.9285714285714, Blast_Score=126, Evalue=2e-29,
Organism=Homo sapiens, GI4502601, Length=273, Percent_Identity=30.7692307692308, Blast_Score=101, Evalue=5e-22,
Organism=Homo sapiens, GI225579078, Length=205, Percent_Identity=33.1707317073171, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI7657478, Length=198, Percent_Identity=33.3333333333333, Blast_Score=72, Evalue=5e-13,
Organism=Homo sapiens, GI31542939, Length=207, Percent_Identity=31.4009661835749, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI166795268, Length=235, Percent_Identity=28.0851063829787, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI40254992, Length=197, Percent_Identity=28.4263959390863, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI7706318, Length=205, Percent_Identity=31.7073170731707, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI150247226, Length=205, Percent_Identity=31.219512195122, Blast_Score=65, Evalue=7e-11,
Organism=Homo sapiens, GI40807363, Length=217, Percent_Identity=25.8064516129032, Blast_Score=65, Evalue=7e-11,
Organism=Homo sapiens, GI40548397, Length=225, Percent_Identity=28.4444444444444, Blast_Score=64, Evalue=9e-11,
Organism=Homo sapiens, GI214010158, Length=225, Percent_Identity=28.4444444444444, Blast_Score=64, Evalue=9e-11,
Organism=Homo sapiens, GI214010156, Length=225, Percent_Identity=28.4444444444444, Blast_Score=64, Evalue=9e-11,
Organism=Homo sapiens, GI22758144, Length=225, Percent_Identity=28.4444444444444, Blast_Score=64, Evalue=9e-11,
Organism=Homo sapiens, GI32483357, Length=195, Percent_Identity=30.7692307692308, Blast_Score=64, Evalue=1e-10,
Organism=Escherichia coli, GI1787335, Length=197, Percent_Identity=33.502538071066, Blast_Score=87, Evalue=9e-19,
Organism=Escherichia coli, GI87082160, Length=215, Percent_Identity=29.7674418604651, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI87082100, Length=217, Percent_Identity=34.5622119815668, Blast_Score=81, Evalue=7e-17,
Organism=Escherichia coli, GI1790717, Length=195, Percent_Identity=27.6923076923077, Blast_Score=78, Evalue=6e-16,
Organism=Escherichia coli, GI2367175, Length=200, Percent_Identity=33, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI1786701, Length=239, Percent_Identity=30.9623430962343, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1789208, Length=203, Percent_Identity=26.6009852216749, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1787820, Length=205, Percent_Identity=26.8292682926829, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1789378, Length=210, Percent_Identity=30.4761904761905, Blast_Score=62, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17559104, Length=203, Percent_Identity=34.4827586206897, Blast_Score=89, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17558990, Length=254, Percent_Identity=29.5275590551181, Blast_Score=82, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI17562904, Length=217, Percent_Identity=31.3364055299539, Blast_Score=80, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI17544670, Length=202, Percent_Identity=30.6930693069307, Blast_Score=80, Evalue=8e-16,
Organism=Caenorhabditis elegans, GI17562906, Length=206, Percent_Identity=33.9805825242718, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI72001658, Length=252, Percent_Identity=28.1746031746032, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17565030, Length=217, Percent_Identity=32.258064516129, Blast_Score=78, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI17559962, Length=245, Percent_Identity=28.9795918367347, Blast_Score=77, Evalue=8e-15,
Organism=Caenorhabditis elegans, GI193204405, Length=210, Percent_Identity=34.2857142857143, Blast_Score=77, Evalue=9e-15,
Organism=Caenorhabditis elegans, GI17531453, Length=197, Percent_Identity=34.5177664974619, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17560332, Length=201, Percent_Identity=32.8358208955224, Blast_Score=75, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI17559964, Length=214, Percent_Identity=32.2429906542056, Blast_Score=74, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI17558996, Length=253, Percent_Identity=25.6916996047431, Blast_Score=74, Evalue=8e-14,
Organism=Caenorhabditis elegans, GI17562990, Length=197, Percent_Identity=31.4720812182741, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI71994600, Length=218, Percent_Identity=30.2752293577982, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17505416, Length=151, Percent_Identity=35.0993377483444, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17560150, Length=198, Percent_Identity=30.8080808080808, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17558994, Length=237, Percent_Identity=28.2700421940928, Blast_Score=71, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17560220, Length=215, Percent_Identity=30.6976744186047, Blast_Score=70, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI17532177, Length=244, Percent_Identity=25.8196721311475, Blast_Score=70, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI17558006, Length=232, Percent_Identity=28.0172413793103, Blast_Score=70, Evalue=8e-13,
Organism=Caenorhabditis elegans, GI71994604, Length=205, Percent_Identity=32.1951219512195, Blast_Score=70, Evalue=8e-13,
Organism=Caenorhabditis elegans, GI17538480, Length=206, Percent_Identity=31.0679611650485, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17562908, Length=206, Percent_Identity=32.0388349514563, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17551412, Length=201, Percent_Identity=30.8457711442786, Blast_Score=67, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI17560676, Length=196, Percent_Identity=28.5714285714286, Blast_Score=67, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI193207563, Length=256, Percent_Identity=25.78125, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17541382, Length=253, Percent_Identity=28.4584980237154, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17538182, Length=212, Percent_Identity=30.6603773584906, Blast_Score=65, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17538486, Length=201, Percent_Identity=28.3582089552239, Blast_Score=64, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI17563726, Length=213, Percent_Identity=30.0469483568075, Blast_Score=64, Evalue=1e-10,
Organism=Saccharomyces cerevisiae, GI6323882, Length=201, Percent_Identity=29.8507462686567, Blast_Score=65, Evalue=1e-11,
Organism=Drosophila melanogaster, GI28571526, Length=195, Percent_Identity=34.8717948717949, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI21357041, Length=199, Percent_Identity=34.1708542713568, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI45554248, Length=261, Percent_Identity=31.4176245210728, Blast_Score=75, Evalue=5e-14,
Organism=Drosophila melanogaster, GI24640117, Length=261, Percent_Identity=31.4176245210728, Blast_Score=75, Evalue=5e-14,
Organism=Drosophila melanogaster, GI23397609, Length=205, Percent_Identity=33.1707317073171, Blast_Score=74, Evalue=9e-14,
Organism=Drosophila melanogaster, GI19921754, Length=204, Percent_Identity=30.8823529411765, Blast_Score=73, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24651139, Length=200, Percent_Identity=30.5, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI28573296, Length=206, Percent_Identity=31.5533980582524, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI116007236, Length=208, Percent_Identity=30.2884615384615, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24586328, Length=217, Percent_Identity=33.1797235023041, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI28571387, Length=203, Percent_Identity=32.512315270936, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI21358495, Length=201, Percent_Identity=28.3582089552239, Blast_Score=68, Evalue=6e-12,
Organism=Drosophila melanogaster, GI24647931, Length=220, Percent_Identity=30, Blast_Score=67, Evalue=8e-12,
Organism=Drosophila melanogaster, GI21357673, Length=195, Percent_Identity=27.1794871794872, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24644339, Length=199, Percent_Identity=31.1557788944724, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI116007238, Length=195, Percent_Identity=29.7435897435897, Blast_Score=65, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011284
- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.1.1.100 [H]

Molecular weight: Translated: 25983; Mature: 25983

Theoretical pI: Translated: 5.40; Mature: 5.40

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METNEIIALVSGANRGIGLAIAAGLARRKGVNVLLGCRDLDRGKTASLPLLAEGLRVRPV
CCCCEEEEEEECCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHCCCEEEEE
QLDATDEASVSSLAHFIENEYGRLDALVNNAGIGLDYDPSLSVVERIQKTLDVNVVGALR
EECCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCEEEHHHH
LTEAMVPLLAKSTRPRIVNVSSELSSFGLRADPDWAYRDFRLPTYAASKAALNSLTLSYA
HHHHHHHHHHCCCCCEEEEEHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
QQLKDKGFKVNAICPGYTATEATNFAGTRTPEQAAVIAVKFALLDNEGPNGIFVNEVQEL
HHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCHHEEEEEEEEEECCCCCCCEEEECHHCC
PW
CC
>Mature Secondary Structure
METNEIIALVSGANRGIGLAIAAGLARRKGVNVLLGCRDLDRGKTASLPLLAEGLRVRPV
CCCCEEEEEEECCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHCCCEEEEE
QLDATDEASVSSLAHFIENEYGRLDALVNNAGIGLDYDPSLSVVERIQKTLDVNVVGALR
EECCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCEEEHHHH
LTEAMVPLLAKSTRPRIVNVSSELSSFGLRADPDWAYRDFRLPTYAASKAALNSLTLSYA
HHHHHHHHHHCCCCCEEEEEHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
QQLKDKGFKVNAICPGYTATEATNFAGTRTPEQAAVIAVKFALLDNEGPNGIFVNEVQEL
HHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCHHEEEEEEEEEECCCCCCCEEEECHHCC
PW
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]