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The map label for this gene is ygbL [C]

Identifier: 154244980

GI number: 154244980

Start: 1183529

End: 1184215

Strand: Direct

Name: ygbL [C]

Synonym: Xaut_1030

Alternate gene names: 154244980

Gene position: 1183529-1184215 (Clockwise)

Preceding gene: 154244979

Following gene: 154244992

Centisome position: 22.29

GC content: 68.27

Gene sequence:

>687_bases
ATGTCGGAAACAAAACTGCGCGAAAGCATCTGCATGTTCGGCCGCTCGCTGTTCGAGCGCGGCCTCACCCCCGGTTCGTC
GGGCAATATCAGCCTGCGCCTCGACGACGGCGGCTGGCTGGTGACGCCCACCAATGCCTCGCTGGGCTTCCTTGATCCGG
CGCGCATCTCGCGCCTCGACGCCACGGGCCGCATCATCTCCGGCGACGCGCCCACCAAGGAGATCCCGCTCCATGAGGCG
CTCTACGACACGCGCTCCAGCGCGCGGGCCATCGTGCATCTGCATTCCACCCATTCGGTGGCGCTCACCATGCTGCCGGA
GATCGATCCGAAGGCGGTGCTGCCGCCCATGACGCCCTATTATCTCATGCGCTGCGGCCAGACCGCGCTGGTGCCCTATT
ATCGGCCCGGCGACCCGGCGGTGTCCGACGCCATCCGGGGGCTCGCCGGGCGCTATTCCTCGGTGCTGCTGGCCAATCAC
GGCCCGGTGGTGGCCGGCGACACGCTGGAAGCCGCCGTCTTCGCCACCGAGGAGCTGGAGGAGACCGCGAGGCTCTATCT
GCTGCTGCGCGGCCTGAACCCGCGCTATCTCTCGCCGGAGCAGGTGGCCGACCTGGTCAAGGCGTTCGGCGTCTCGCTGC
CGGCGGACGATCACGCGGGGCATGACCACGAGGGGCATGGTCATTAG

Upstream 100 bases:

>100_bases
TCGGTTCGGACCCGGCATTTTCTTTCCGCGCCGGGCCGAGATCTTCCGTTCCCGCTTTGGAGCCCGCGCCTCAGCATTGG
GGCCGGGCCGAGGACCTGCC

Downstream 100 bases:

>100_bases
GGCCGGCCCAGCACGAACGAATGCTCGAACCCCAGCCCGACCGTGATCTGGTTCGGGCTGCCGGAGAGCGTGGTCACGGG
GCTCGTGGCCGCCGCGCCGG

Product: putative aldolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 227

Protein sequence:

>228_residues
MSETKLRESICMFGRSLFERGLTPGSSGNISLRLDDGGWLVTPTNASLGFLDPARISRLDATGRIISGDAPTKEIPLHEA
LYDTRSSARAIVHLHSTHSVALTMLPEIDPKAVLPPMTPYYLMRCGQTALVPYYRPGDPAVSDAIRGLAGRYSSVLLANH
GPVVAGDTLEAAVFATEELEETARLYLLLRGLNPRYLSPEQVADLVKAFGVSLPADDHAGHDHEGHGH

Sequences:

>Translated_228_residues
MSETKLRESICMFGRSLFERGLTPGSSGNISLRLDDGGWLVTPTNASLGFLDPARISRLDATGRIISGDAPTKEIPLHEA
LYDTRSSARAIVHLHSTHSVALTMLPEIDPKAVLPPMTPYYLMRCGQTALVPYYRPGDPAVSDAIRGLAGRYSSVLLANH
GPVVAGDTLEAAVFATEELEETARLYLLLRGLNPRYLSPEQVADLVKAFGVSLPADDHAGHDHEGHGH
>Mature_227_residues
SETKLRESICMFGRSLFERGLTPGSSGNISLRLDDGGWLVTPTNASLGFLDPARISRLDATGRIISGDAPTKEIPLHEAL
YDTRSSARAIVHLHSTHSVALTMLPEIDPKAVLPPMTPYYLMRCGQTALVPYYRPGDPAVSDAIRGLAGRYSSVLLANHG
PVVAGDTLEAAVFATEELEETARLYLLLRGLNPRYLSPEQVADLVKAFGVSLPADDHAGHDHEGHGH

Specific function: Unknown

COG id: COG0235

COG function: function code G; Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldolase class II family. AraD/FucA subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789094, Length=203, Percent_Identity=47.7832512315271, Blast_Score=189, Evalue=1e-49,
Organism=Escherichia coli, GI1789164, Length=213, Percent_Identity=28.6384976525822, Blast_Score=81, Evalue=6e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001303 [H]

Pfam domain/function: PF00596 Aldolase_II [H]

EC number: NA

Molecular weight: Translated: 24605; Mature: 24474

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSETKLRESICMFGRSLFERGLTPGSSGNISLRLDDGGWLVTPTNASLGFLDPARISRLD
CCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEECCCCCCCCCCHHHHHHHC
ATGRIISGDAPTKEIPLHEALYDTRSSARAIVHLHSTHSVALTMLPEIDPKAVLPPMTPY
CCCCEEECCCCCCCCCHHHHHHHHHCCCEEEEEEECCCCEEEEECCCCCCCCCCCCCCHH
YLMRCGQTALVPYYRPGDPAVSDAIRGLAGRYSSVLLANHGPVVAGDTLEAAVFATEELE
HHHHCCCCEECCEECCCCHHHHHHHHHHHHHHHEEEEECCCCEEECCCHHHHHHHHHHHH
ETARLYLLLRGLNPRYLSPEQVADLVKAFGVSLPADDHAGHDHEGHGH
HHHHHHHHEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SETKLRESICMFGRSLFERGLTPGSSGNISLRLDDGGWLVTPTNASLGFLDPARISRLD
CHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEECCCCCCCCCCHHHHHHHC
ATGRIISGDAPTKEIPLHEALYDTRSSARAIVHLHSTHSVALTMLPEIDPKAVLPPMTPY
CCCCEEECCCCCCCCCHHHHHHHHHCCCEEEEEEECCCCEEEEECCCCCCCCCCCCCCHH
YLMRCGQTALVPYYRPGDPAVSDAIRGLAGRYSSVLLANHGPVVAGDTLEAAVFATEELE
HHHHCCCCEECCEECCCCHHHHHHHHHHHHHHHEEEEECCCCEEECCCHHHHHHHHHHHH
ETARLYLLLRGLNPRYLSPEQVADLVKAFGVSLPADDHAGHDHEGHGH
HHHHHHHHEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]