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The map label for this gene is 154244992

Identifier: 154244992

GI number: 154244992

Start: 1194832

End: 1195377

Strand: Direct

Name: 154244992

Synonym: Xaut_1042

Alternate gene names: NA

Gene position: 1194832-1195377 (Clockwise)

Preceding gene: 154244980

Following gene: 154244994

Centisome position: 22.51

GC content: 63.55

Gene sequence:

>546_bases
ATGGAGCGAACTTGTTCGCCGCGCTCCGGTCGCGGCCGGCCGAAGATGATCGTCAGCGACAATGGCAGCGAGTTCACCTC
CAACGCCATTCTGGGCTGGGCCGACGCGGCTCGGGTCGAGTGGCACTCCATCGCGCCCGGCAAGCCGATGCAGAATGGCT
TCATCGAGAGCTTCAACGGCCGCCTTCGGGACGAGTTGCTGAACGAAACGCTGTTCTCCAGCCTGTCCAAGACAAGAGCC
GCTCTCGCCCGGCGGCAGCTCGACTACAACACCGCCCGGCCGCACTCGAAGCTCGGATGGCAGACGCCAAGGGCCTTCGC
CTCAACCTTCCCCCCCGCGGCTGGATCAGACGCTCCGCACCATGAATGGCTCCACGTCTGCACCCGCCGCTCAGGCCGCC
CCAGAGCGCAAATCCAACCGACGGAACGAACTCACAGCTGGATAGAAGTTGGGGGCAACGTCATAGGCCTTCGAGTTTTC
GGGCCGATAAGCACCCGCCAGGACATTAGCGCGGATGGTTATGACCTTGCCGGCGAATTCAGCTGA

Upstream 100 bases:

>100_bases
GGCGGGGTCTAAGGCCCGCATCGGGGGCGCGCGGTGCCGAGCCGGCGCAGGCGTCAGCCTGCCCCTTTAAGGTGCGGTGG
CTCCTGCCAGCTCAAAATCG

Downstream 100 bases:

>100_bases
CCCACCGTCATCCGGTGGATGTCTTCAGCTTGGAAACGCTGGCTTTTACCGTCTCGACGAGCTGTTCGAGGCGAGATGGC
GGGCGGGTCCTGTATAGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MERTCSPRSGRGRPKMIVSDNGSEFTSNAILGWADAARVEWHSIAPGKPMQNGFIESFNGRLRDELLNETLFSSLSKTRA
ALARRQLDYNTARPHSKLGWQTPRAFASTFPPAAGSDAPHHEWLHVCTRRSGRPRAQIQPTERTHSWIEVGGNVIGLRVF
GPISTRQDISADGYDLAGEFS

Sequences:

>Translated_181_residues
MERTCSPRSGRGRPKMIVSDNGSEFTSNAILGWADAARVEWHSIAPGKPMQNGFIESFNGRLRDELLNETLFSSLSKTRA
ALARRQLDYNTARPHSKLGWQTPRAFASTFPPAAGSDAPHHEWLHVCTRRSGRPRAQIQPTERTHSWIEVGGNVIGLRVF
GPISTRQDISADGYDLAGEFS
>Mature_181_residues
MERTCSPRSGRGRPKMIVSDNGSEFTSNAILGWADAARVEWHSIAPGKPMQNGFIESFNGRLRDELLNETLFSSLSKTRA
ALARRQLDYNTARPHSKLGWQTPRAFASTFPPAAGSDAPHHEWLHVCTRRSGRPRAQIQPTERTHSWIEVGGNVIGLRVF
GPISTRQDISADGYDLAGEFS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 20073; Mature: 20073

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERTCSPRSGRGRPKMIVSDNGSEFTSNAILGWADAARVEWHSIAPGKPMQNGFIESFNG
CCCCCCCCCCCCCCEEEECCCCCCCCCCCEEECCCCCCEEEECCCCCCCCCCCHHHHHCC
RLRDELLNETLFSSLSKTRAALARRQLDYNTARPHSKLGWQTPRAFASTFPPAAGSDAPH
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCH
HEWLHVCTRRSGRPRAQIQPTERTHSWIEVGGNVIGLRVFGPISTRQDISADGYDLAGEF
HHHHHHHHCCCCCCCCEECCCHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCC
S
C
>Mature Secondary Structure
MERTCSPRSGRGRPKMIVSDNGSEFTSNAILGWADAARVEWHSIAPGKPMQNGFIESFNG
CCCCCCCCCCCCCCEEEECCCCCCCCCCCEEECCCCCCEEEECCCCCCCCCCCHHHHHCC
RLRDELLNETLFSSLSKTRAALARRQLDYNTARPHSKLGWQTPRAFASTFPPAAGSDAPH
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCH
HEWLHVCTRRSGRPRAQIQPTERTHSWIEVGGNVIGLRVFGPISTRQDISADGYDLAGEF
HHHHHHHHCCCCCCCCEECCCHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCC
S
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1718819 [H]