| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is eda [H]
Identifier: 154244969
GI number: 154244969
Start: 1170831
End: 1171472
Strand: Direct
Name: eda [H]
Synonym: Xaut_1019
Alternate gene names: 154244969
Gene position: 1170831-1171472 (Clockwise)
Preceding gene: 154244968
Following gene: 154244979
Centisome position: 22.05
GC content: 74.45
Gene sequence:
>642_bases GTGACCGATCAGATCCAGCCCGGGCTTCACTCCATTCTCTCCCGCGCCCCGGTGGTGCCCGTGGTGGTGGTGGAGCGCGC CGCCGATGCCGTTCCGCTGGCCCGCGCTTTGGTGGCGGGCGGCCTGCCAGCCATCGAGATCACCCTGCGTACGCCGGCTG CCCTCGACGCCATCCGCGCCGTGGCGCAGGAGGTGGAGGGCGCCATTCCCGGCGTCGGCACGGTGCTCGACGCCGCCCAG CTGGAGGCTGCCGAGAAGGCCGGCGCGCGTTTTGCCGTCTCGCCCGGCGCCACGCCGCGCCTGCTGGACGCCGCCGCCTC CTTCGCCATCCCGCTGTTGCCCGGCATCGCCACGGCCGGGGAGGCCATGGGCCTGATCGAGCGCGGCTACCGCTTCGCCA AGTTCTTCCCGGCGGAGCCGGCGGGCGGCAGCGCCTATCTCGCCTCCATCGCCTCGCCGTTGCCGCAGCTCACCTTCTGC CCCACCGGCGGCATCAGCCTCGCCTCCGCGCCGCGCTATCTGGCCCTGCCCAACGTGATCTGCGTCGGCGGCTCCTGGAT GCTGCCGCGCGCGCAGGTGGACGCCGGCGACTGGGCGGCCATCGAGGCCGCGAGCCGGGCGGCGGCAGCGCTCAAGTCCT GA
Upstream 100 bases:
>100_bases GCGCTTCCCACTCCGGCGTCGGCCGCGAGCTCTTCGCCCCCTTCCGAAACGCCGTCGGCCAGGCCGAAAAGGGCGCAAGC ATTTTCCAGGAGGTTTTCGC
Downstream 100 bases:
>100_bases GGACGGACACCCGGGGGTGAGGGCGAGATCCCCTCGCCCCCGCGCCGCGCGGTCTCAAAGCGTCGAGAAGCGGTAGATGG AGACGTGCCGGTAGGTCGCG
Product: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase
Products: NA
Alternate protein names: KDPG-aldolase; Phospho-2-dehydro-3-deoxygluconate aldolase; Phospho-2-keto-3-deoxygluconate aldolase [H]
Number of amino acids: Translated: 213; Mature: 212
Protein sequence:
>213_residues MTDQIQPGLHSILSRAPVVPVVVVERAADAVPLARALVAGGLPAIEITLRTPAALDAIRAVAQEVEGAIPGVGTVLDAAQ LEAAEKAGARFAVSPGATPRLLDAAASFAIPLLPGIATAGEAMGLIERGYRFAKFFPAEPAGGSAYLASIASPLPQLTFC PTGGISLASAPRYLALPNVICVGGSWMLPRAQVDAGDWAAIEAASRAAAALKS
Sequences:
>Translated_213_residues MTDQIQPGLHSILSRAPVVPVVVVERAADAVPLARALVAGGLPAIEITLRTPAALDAIRAVAQEVEGAIPGVGTVLDAAQ LEAAEKAGARFAVSPGATPRLLDAAASFAIPLLPGIATAGEAMGLIERGYRFAKFFPAEPAGGSAYLASIASPLPQLTFC PTGGISLASAPRYLALPNVICVGGSWMLPRAQVDAGDWAAIEAASRAAAALKS >Mature_212_residues TDQIQPGLHSILSRAPVVPVVVVERAADAVPLARALVAGGLPAIEITLRTPAALDAIRAVAQEVEGAIPGVGTVLDAAQL EAAEKAGARFAVSPGATPRLLDAAASFAIPLLPGIATAGEAMGLIERGYRFAKFFPAEPAGGSAYLASIASPLPQLTFCP TGGISLASAPRYLALPNVICVGGSWMLPRAQVDAGDWAAIEAASRAAAALKS
Specific function: KEY ENZYME IN THE ENTNER-DOUDOROFF PATHWAY. PARTICIPATES IN THE REGULATION OF THE INTRACELLULAR LEVEL OF GLYOXYLATE. [C]
COG id: COG0800
COG function: function code G; 2-keto-3-deoxy-6-phosphogluconate aldolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the KHG/KDPG aldolase family [H]
Homologues:
Organism=Escherichia coli, GI1788156, Length=199, Percent_Identity=52.7638190954774, Blast_Score=178, Evalue=3e-46,
Paralogues:
None
Copy number: 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000887 - InterPro: IPR013785 [H]
Pfam domain/function: PF01081 Aldolase [H]
EC number: =4.1.2.14 [H]
Molecular weight: Translated: 21480; Mature: 21349
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: PS00159 ALDOLASE_KDPG_KHG_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDQIQPGLHSILSRAPVVPVVVVERAADAVPLARALVAGGLPAIEITLRTPAALDAIRA CCCCCCHHHHHHHHCCCCCCEEEEHHHCCHHHHHHHHHHCCCCEEEEEECCCHHHHHHHH VAQEVEGAIPGVGTVLDAAQLEAAEKAGARFAVSPGATPRLLDAAASFAIPLLPGIATAG HHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHCCHHHHH EAMGLIERGYRFAKFFPAEPAGGSAYLASIASPLPQLTFCPTGGISLASAPRYLALPNVI HHHHHHHHCCHHHHCCCCCCCCCHHHHHHHHCCCCCEEECCCCCCCCCCCCCEEECCCEE CVGGSWMLPRAQVDAGDWAAIEAASRAAAALKS EECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure TDQIQPGLHSILSRAPVVPVVVVERAADAVPLARALVAGGLPAIEITLRTPAALDAIRA CCCCCHHHHHHHHCCCCCCEEEEHHHCCHHHHHHHHHHCCCCEEEEEECCCHHHHHHHH VAQEVEGAIPGVGTVLDAAQLEAAEKAGARFAVSPGATPRLLDAAASFAIPLLPGIATAG HHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHCCHHHHH EAMGLIERGYRFAKFFPAEPAGGSAYLASIASPLPQLTFCPTGGISLASAPRYLALPNVI HHHHHHHHCCHHHHCCCCCCCCCHHHHHHHHCCCCCEEECCCCCCCCCCCCCEEECCCEE CVGGSWMLPRAQVDAGDWAAIEAASRAAAALKS EECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]