| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is grsT [H]
Identifier: 154244955
GI number: 154244955
Start: 1126461
End: 1127297
Strand: Direct
Name: grsT [H]
Synonym: Xaut_1005
Alternate gene names: 154244955
Gene position: 1126461-1127297 (Clockwise)
Preceding gene: 154244952
Following gene: 154244956
Centisome position: 21.22
GC content: 65.59
Gene sequence:
>837_bases ATGCCAGGGGCTCGCGTTGCAATATTATACCGCCATCATCCTCCATTGCGTTGTCGCCAGATGAATGCCGAACCTTCGCC CTGGTTTCTGGGGGGCGCGACGCGGGGAGGCCGTCGCCTGCGCCTGTTCTGCCTGCCCTTCGCGGGCGGCAATGCCAGCG CCTATACGCAGTGGCAGGCGGCCATCGATCCCGCCATCGAGGTGGTGCCGGTTCAGCTGCCGGGCCATGGCGGGCGGATC CGCGAGGCGCCGCTCCAGGCCATGGACGACATGGCGCAGGGGCTGGCCGATGCGATGGTGCGCCGGCTTGATCTGCCCTA TGCCGTGTTCGGCCACAGCATGGGCGCGCTGCTCGCCTTCGAAGCCTTGCGGCGGCTGAGGGAGCGGGGAGCCTTGATGC CGGCGGCGCTGTTCGTCTCGGCACGACGCGCGCCCCACTTGCCGCCGTCCCGTCCGCCGTTGCACGTTCTGTCCGACGCC GAGCTGGTCGGTGAACTGCGCGCCCTGAACGGGACGCCCGACGTGGTGCTGGCGGATCGCGAACTGCTGGACTTGCTGCT GCCTGTGATCCGCGCCGATCTCAAGGCGGTTGAAACCTACCGTTTTCGGGAGGCGCAGGCGTTTGATTTCCCCATTCACG CCTTTGGTGGTGCGCGGGATTCGATCGATGAAGAGGATTTGCGGGCCTGGTCGCGATACTCGACCTCCGGGTTCAGCCTG AGGATGTATGCGGGCGATCATTTTTATTTGAATGACCATCGCATGTCCCTGCTGCGGGCCCTGGAATCTTTGTGCCGGGT GACCCATCGGGAGACGCACGGGGAAGTCCTGTCCTGA
Upstream 100 bases:
>100_bases TGCAGTGTGGCGGATGGCGGGGATATCTGTTCATCTGCGGAAAAACGATGGTGACCCCGAAGGGCCGTCCAAGCCGCAAG ATTTGCGATGACTGTCCGGA
Downstream 100 bases:
>100_bases TCCCCGGCGACGTGTGGATGGCGCCCGCGCCACGGCGTTCGTCCTCCTCCCGAAGGCTGGCGCGGGCAGGGTGGACAGAG CCGGTTCGTCAGGAGTGCCG
Product: oleoyl-(acyl-carrier-protein) hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 278; Mature: 277
Protein sequence:
>278_residues MPGARVAILYRHHPPLRCRQMNAEPSPWFLGGATRGGRRLRLFCLPFAGGNASAYTQWQAAIDPAIEVVPVQLPGHGGRI REAPLQAMDDMAQGLADAMVRRLDLPYAVFGHSMGALLAFEALRRLRERGALMPAALFVSARRAPHLPPSRPPLHVLSDA ELVGELRALNGTPDVVLADRELLDLLLPVIRADLKAVETYRFREAQAFDFPIHAFGGARDSIDEEDLRAWSRYSTSGFSL RMYAGDHFYLNDHRMSLLRALESLCRVTHRETHGEVLS
Sequences:
>Translated_278_residues MPGARVAILYRHHPPLRCRQMNAEPSPWFLGGATRGGRRLRLFCLPFAGGNASAYTQWQAAIDPAIEVVPVQLPGHGGRI REAPLQAMDDMAQGLADAMVRRLDLPYAVFGHSMGALLAFEALRRLRERGALMPAALFVSARRAPHLPPSRPPLHVLSDA ELVGELRALNGTPDVVLADRELLDLLLPVIRADLKAVETYRFREAQAFDFPIHAFGGARDSIDEEDLRAWSRYSTSGFSL RMYAGDHFYLNDHRMSLLRALESLCRVTHRETHGEVLS >Mature_277_residues PGARVAILYRHHPPLRCRQMNAEPSPWFLGGATRGGRRLRLFCLPFAGGNASAYTQWQAAIDPAIEVVPVQLPGHGGRIR EAPLQAMDDMAQGLADAMVRRLDLPYAVFGHSMGALLAFEALRRLRERGALMPAALFVSARRAPHLPPSRPPLHVLSDAE LVGELRALNGTPDVVLADRELLDLLLPVIRADLKAVETYRFREAQAFDFPIHAFGGARDSIDEEDLRAWSRYSTSGFSLR MYAGDHFYLNDHRMSLLRALESLCRVTHRETHGEVLS
Specific function: Probable thioesterase involved in the biosynthesis of gramicidin S [H]
COG id: COG3208
COG function: function code Q; Predicted thioesterase involved in non-ribosomal peptide biosynthesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thioesterase family [H]
Homologues:
Organism=Homo sapiens, GI89257335, Length=222, Percent_Identity=30.1801801801802, Blast_Score=94, Evalue=2e-19, Organism=Homo sapiens, GI8922871, Length=191, Percent_Identity=30.8900523560209, Blast_Score=74, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012223 - InterPro: IPR001031 [H]
Pfam domain/function: PF00975 Thioesterase [H]
EC number: NA
Molecular weight: Translated: 30947; Mature: 30816
Theoretical pI: Translated: 8.50; Mature: 8.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGARVAILYRHHPPLRCRQMNAEPSPWFLGGATRGGRRLRLFCLPFAGGNASAYTQWQA CCCCEEEEEEECCCCCHHHCCCCCCCCEEECCCCCCCCEEEEEEEEECCCCCCHHHHHHH AIDPAIEVVPVQLPGHGGRIREAPLQAMDDMAQGLADAMVRRLDLPYAVFGHSMGALLAF HCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHH EALRRLRERGALMPAALFVSARRAPHLPPSRPPLHVLSDAELVGELRALNGTPDVVLADR HHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHHHHHCCCCCCEEECCH ELLDLLLPVIRADLKAVETYRFREAQAFDFPIHAFGGARDSIDEEDLRAWSRYSTSGFSL HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHCCCCCCEE RMYAGDHFYLNDHRMSLLRALESLCRVTHRETHGEVLS EEEECCEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure PGARVAILYRHHPPLRCRQMNAEPSPWFLGGATRGGRRLRLFCLPFAGGNASAYTQWQA CCCEEEEEEECCCCCHHHCCCCCCCCEEECCCCCCCCEEEEEEEEECCCCCCHHHHHHH AIDPAIEVVPVQLPGHGGRIREAPLQAMDDMAQGLADAMVRRLDLPYAVFGHSMGALLAF HCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHH EALRRLRERGALMPAALFVSARRAPHLPPSRPPLHVLSDAELVGELRALNGTPDVVLADR HHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHHHHHCCCCCCEEECCH ELLDLLLPVIRADLKAVETYRFREAQAFDFPIHAFGGARDSIDEEDLRAWSRYSTSGFSL HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHCCCCCCEE RMYAGDHFYLNDHRMSLLRALESLCRVTHRETHGEVLS EEEECCEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2477357; 7512553 [H]