| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154244952
Identifier: 154244952
GI number: 154244952
Start: 1121567
End: 1122922
Strand: Direct
Name: 154244952
Synonym: Xaut_1002
Alternate gene names: NA
Gene position: 1121567-1122922 (Clockwise)
Preceding gene: 154244949
Following gene: 154244955
Centisome position: 21.13
GC content: 67.33
Gene sequence:
>1356_bases GTGGGTTCGGGGGAGGCCGCCGCGTCGCGCGCTGCGGACAGCTTCCTAAGCGGGGAGGGGGAGATGAAGCCGCATATTCT GCTGATGGGTGAGGCCGTGACCCTGACCCATGTGGTCCGCCCCGCCTTGCTCGCCGATGCGCTCCATGCCGCCGGCTATG GGGTGACCTTGGCGTGCGATCCGCGCTTCAACGCCCTCATCGGCCCGCGCCCCTACCGCACCATCGCCCTGAAATCCTCC ATCGACCCAGCGACCAGCACCGCGCTCTTGAAGCAGAACCAGCCGCTGTTCAGCGTCGAGACCTTCAACGCCTATGTGCG CGAGGACGTGCGCCTGATGCGGCTGGTTCAGCCGCAACTGGTGGTGGGCGACATGCGCCAGTCCCTCGCCATCAGCGCGC AGCTCACCAAGGTGCCCTATGTGAACATCATCAACGCCCACTGGAGCCCGTGGTCGGACGAGCCGTTCGCCCTGGTGGAC CATCCGCTCCACAAGGTGCTGGGCCGCGACACCGGGGACCGGCTGCTGTCGCTGCTGACGCCGCTGGGCTCCATGATGAT GGCGCTGCCTATCAACATTGCCGCCCTCAACAACGGGGTCGCGCCAATCGGGGCGGGGCTTCGGGAGACCTTCTGCGCCG GGGACTATGTGGTCTATCCCGACATTCCGGAGCTGAGCCCCACCCGTCCCCTGCCGCCGAACCACCGCTATATCGGCCCC CTCGACTTCAGCCCGCAGATGGCGCCGCCACCGTGGTGGGATGCGGTGCCCGGAGACAAGCCGGTCATCTATGTCAATCT CGGCAGCTCGGGCGAGCCGGCTCTCCTGGAGGCGATCCTTGCCGGGCTGGCCGACCTTCCGGTCACGGTGATCGCGGCCA CCGCCCATCCCGGCGCCGTGTTGGAGGTACCTGCCAACGCCTTCGTTGCCGATTACCTGCCGGGGGATGCGGCGGCCGCC CGCGCGGCGCTTGTCATCTGCAATGCCGGCGCCTCCAGCGGATGCCAGGCGCTGATGGCTGGAACGCCCTTCCTCGGCAT CGCCAGCAACACGGACCAGTTGTCCTACGGCACCATGGTGGCCAAGACCGGCGCGGCGGAAAACCTGCGGGAGGACGAGG TGACCGCCGAGCGCGTGCGCGAGACGGTGGCGCGCATGTTGGCGTCGCCGGGATACCGCGAGGCAGCCCAATGCCTGAAG CAGGATCTGGCCCGCTACGACGCCAAGGCGAACTTCGTCGCCTTCGTCGGGGATATCCTTGCGGCGCCCCTCAAAGCGTT TTCAAGCGAAGTGGACACCGGTTCGCACGCAGAAAACGCATCAACACGAGAGCCCACGGCGGCTTCCTTGAGCTGA
Upstream 100 bases:
>100_bases ACGAGGAGAAAATCAGCCATTGTCAGGATCTCGGCGGCAGCGATGATGTCGGGGCCCAGGGTGGGGGCTATAGTCACACC AGTTGGGTCGTTTTCTCAAG
Downstream 100 bases:
>100_bases GGCGAACGGAAAAAGCTCTAGGAGCGCTGTTTGATCAGCACCCCGGCCGCCACCACGGCGATGGCCAGGACCGCGAGGCC GGTGGGGGTGGTGACGATCT
Product: glycosyltransferase family 28 protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 451; Mature: 450
Protein sequence:
>451_residues MGSGEAAASRAADSFLSGEGEMKPHILLMGEAVTLTHVVRPALLADALHAAGYGVTLACDPRFNALIGPRPYRTIALKSS IDPATSTALLKQNQPLFSVETFNAYVREDVRLMRLVQPQLVVGDMRQSLAISAQLTKVPYVNIINAHWSPWSDEPFALVD HPLHKVLGRDTGDRLLSLLTPLGSMMMALPINIAALNNGVAPIGAGLRETFCAGDYVVYPDIPELSPTRPLPPNHRYIGP LDFSPQMAPPPWWDAVPGDKPVIYVNLGSSGEPALLEAILAGLADLPVTVIAATAHPGAVLEVPANAFVADYLPGDAAAA RAALVICNAGASSGCQALMAGTPFLGIASNTDQLSYGTMVAKTGAAENLREDEVTAERVRETVARMLASPGYREAAQCLK QDLARYDAKANFVAFVGDILAAPLKAFSSEVDTGSHAENASTREPTAASLS
Sequences:
>Translated_451_residues MGSGEAAASRAADSFLSGEGEMKPHILLMGEAVTLTHVVRPALLADALHAAGYGVTLACDPRFNALIGPRPYRTIALKSS IDPATSTALLKQNQPLFSVETFNAYVREDVRLMRLVQPQLVVGDMRQSLAISAQLTKVPYVNIINAHWSPWSDEPFALVD HPLHKVLGRDTGDRLLSLLTPLGSMMMALPINIAALNNGVAPIGAGLRETFCAGDYVVYPDIPELSPTRPLPPNHRYIGP LDFSPQMAPPPWWDAVPGDKPVIYVNLGSSGEPALLEAILAGLADLPVTVIAATAHPGAVLEVPANAFVADYLPGDAAAA RAALVICNAGASSGCQALMAGTPFLGIASNTDQLSYGTMVAKTGAAENLREDEVTAERVRETVARMLASPGYREAAQCLK QDLARYDAKANFVAFVGDILAAPLKAFSSEVDTGSHAENASTREPTAASLS >Mature_450_residues GSGEAAASRAADSFLSGEGEMKPHILLMGEAVTLTHVVRPALLADALHAAGYGVTLACDPRFNALIGPRPYRTIALKSSI DPATSTALLKQNQPLFSVETFNAYVREDVRLMRLVQPQLVVGDMRQSLAISAQLTKVPYVNIINAHWSPWSDEPFALVDH PLHKVLGRDTGDRLLSLLTPLGSMMMALPINIAALNNGVAPIGAGLRETFCAGDYVVYPDIPELSPTRPLPPNHRYIGPL DFSPQMAPPPWWDAVPGDKPVIYVNLGSSGEPALLEAILAGLADLPVTVIAATAHPGAVLEVPANAFVADYLPGDAAAAR AALVICNAGASSGCQALMAGTPFLGIASNTDQLSYGTMVAKTGAAENLREDEVTAERVRETVARMLASPGYREAAQCLKQ DLARYDAKANFVAFVGDILAAPLKAFSSEVDTGSHAENASTREPTAASLS
Specific function: Involved in glycosylation steps downstream of mono-O- methyl-glycosyl-p-hydroxybenzoic acid derivative (p-HBAD I) and 2- O-methyl-rhamnosyl-phenolphthiocerol dimycocerosate (mycoside B) during the p-hydroxybenzoic acid derivatives (p-HBAD) and glycosylate
COG id: COG1819
COG function: function code GC; Glycosyl transferases, related to UDP-glucuronosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDP-glycosyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002213 [H]
Pfam domain/function: PF00201 UDPGT [H]
EC number: NA
Molecular weight: Translated: 47563; Mature: 47432
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSGEAAASRAADSFLSGEGEMKPHILLMGEAVTLTHVVRPALLADALHAAGYGVTLACD CCCCHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCEEEEEC PRFNALIGPRPYRTIALKSSIDPATSTALLKQNQPLFSVETFNAYVREDVRLMRLVQPQL CCCCCCCCCCCCEEEEEECCCCCHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHCHHH VVGDMRQSLAISAQLTKVPYVNIINAHWSPWSDEPFALVDHPLHKVLGRDTGDRLLSLLT HHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHH PLGSMMMALPINIAALNNGVAPIGAGLRETFCAGDYVVYPDIPELSPTRPLPPNHRYIGP HHHHHHHHHCCEEEEECCCCCCCCCCHHHHHCCCCEEECCCCCCCCCCCCCCCCCCEECC LDFSPQMAPPPWWDAVPGDKPVIYVNLGSSGEPALLEAILAGLADLPVTVIAATAHPGAV CCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCEE LEVPANAFVADYLPGDAAAARAALVICNAGASSGCQALMAGTPFLGIASNTDQLSYGTMV EEECCCCEEECCCCCCHHHHCEEEEEEECCCCCCCHHHHCCCCCEEECCCCCCCCCCEEE AKTGAAENLREDEVTAERVRETVARMLASPGYREAAQCLKQDLARYDAKANFVAFVGDIL ECCCCHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHH AAPLKAFSSEVDTGSHAENASTREPTAASLS HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure GSGEAAASRAADSFLSGEGEMKPHILLMGEAVTLTHVVRPALLADALHAAGYGVTLACD CCCHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCEEEEEC PRFNALIGPRPYRTIALKSSIDPATSTALLKQNQPLFSVETFNAYVREDVRLMRLVQPQL CCCCCCCCCCCCEEEEEECCCCCHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHCHHH VVGDMRQSLAISAQLTKVPYVNIINAHWSPWSDEPFALVDHPLHKVLGRDTGDRLLSLLT HHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHH PLGSMMMALPINIAALNNGVAPIGAGLRETFCAGDYVVYPDIPELSPTRPLPPNHRYIGP HHHHHHHHHCCEEEEECCCCCCCCCCHHHHHCCCCEEECCCCCCCCCCCCCCCCCCEECC LDFSPQMAPPPWWDAVPGDKPVIYVNLGSSGEPALLEAILAGLADLPVTVIAATAHPGAV CCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCEE LEVPANAFVADYLPGDAAAARAALVICNAGASSGCQALMAGTPFLGIASNTDQLSYGTMV EEECCCCEEECCCCCCHHHHCEEEEEEECCCCCCCHHHHCCCCCEEECCCCCCCCCCEEE AKTGAAENLREDEVTAERVRETVARMLASPGYREAAQCLKQDLARYDAKANFVAFVGDIL ECCCCHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHH AAPLKAFSSEVDTGSHAENASTREPTAASLS HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA