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The map label for this gene is yezE [H]

Identifier: 154244929

GI number: 154244929

Start: 1095118

End: 1095708

Strand: Reverse

Name: yezE [H]

Synonym: Xaut_0979

Alternate gene names: 154244929

Gene position: 1095708-1095118 (Counterclockwise)

Preceding gene: 154244930

Following gene: 154244928

Centisome position: 20.64

GC content: 68.36

Gene sequence:

>591_bases
ATGGCACGGCCACGGGCGTTCGACGAAAACGAGGTTCTGGACGCGGCGATCCGCTGCTTCTGGACGCGCGGCTATGAGGC
AACCTCGGTGCGCGACCTCGCGTCCAGCATGGGGCTCACCGGCGCTAGCCTGTACAACGCCTTCGGCGACAAGCACGCGC
TCTATGAACGCGCGCTGGAGCGCTACGTGGACGAGAGCGTGGCCGACCGCATCCGGCGCCTCGAGGATCCCGCCATCGCC
CCGCGTGCGGCCATCGGCGCCTTCTTAGATGAGATCGTGGAACGCTCGCTGAACGATCCGGACATGAAGGGCTGCATGGT
GGTCAATGCCGCCGTGGAGCTTGGGCCCCATGATCCCGAGCTGCGGGCCGCCGCAGGCCGCACCCTCGGCGAGATCGAGG
CCTTCTTTCGCCGCCGCGTGGCGGCAGGCCAGAAGGACGGCGCCATCAACCCCGACCAGACGGCGGAAGATCTCGCGCGC
ATGCTGCTCGGCGTGCTGCTGGGCATCCGGGTCCTGTCCCGCATCCGCCCAGAGCGGATGCTGCTGGAAGGTGTGCTGCG
TCCGGCTCTTGCAGCACTGGAACCGCGCTGA

Upstream 100 bases:

>100_bases
GACCGCTCGCCGCGCCGGGTGACGACGCCGGGTGACGACAAGGCGGGCGGGCGTTAGGCTCGCCCACCAGTTCCAACCGC
AACGAAAGTCCCCTTCACAC

Downstream 100 bases:

>100_bases
GCTTACCGGGCGTGGGCAGCAGGGCAGGACATCCAGGACCGATCGGGAGGGAGACACGCCCATGATCAAGGCTTTCGTAT
TCGACGCCTACGGCACGCTC

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 195

Protein sequence:

>196_residues
MARPRAFDENEVLDAAIRCFWTRGYEATSVRDLASSMGLTGASLYNAFGDKHALYERALERYVDESVADRIRRLEDPAIA
PRAAIGAFLDEIVERSLNDPDMKGCMVVNAAVELGPHDPELRAAAGRTLGEIEAFFRRRVAAGQKDGAINPDQTAEDLAR
MLLGVLLGIRVLSRIRPERMLLEGVLRPALAALEPR

Sequences:

>Translated_196_residues
MARPRAFDENEVLDAAIRCFWTRGYEATSVRDLASSMGLTGASLYNAFGDKHALYERALERYVDESVADRIRRLEDPAIA
PRAAIGAFLDEIVERSLNDPDMKGCMVVNAAVELGPHDPELRAAAGRTLGEIEAFFRRRVAAGQKDGAINPDQTAEDLAR
MLLGVLLGIRVLSRIRPERMLLEGVLRPALAALEPR
>Mature_195_residues
ARPRAFDENEVLDAAIRCFWTRGYEATSVRDLASSMGLTGASLYNAFGDKHALYERALERYVDESVADRIRRLEDPAIAP
RAAIGAFLDEIVERSLNDPDMKGCMVVNAAVELGPHDPELRAAAGRTLGEIEAFFRRRVAAGQKDGAINPDQTAEDLARM
LLGVLLGIRVLSRIRPERMLLEGVLRPALAALEPR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87081833, Length=172, Percent_Identity=26.7441860465116, Blast_Score=79, Evalue=3e-16,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR015893
- InterPro:   IPR011075
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 21602; Mature: 21471

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARPRAFDENEVLDAAIRCFWTRGYEATSVRDLASSMGLTGASLYNAFGDKHALYERALE
CCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHH
RYVDESVADRIRRLEDPAIAPRAAIGAFLDEIVERSLNDPDMKGCMVVNAAVELGPHDPE
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCHH
LRAAAGRTLGEIEAFFRRRVAAGQKDGAINPDQTAEDLARMLLGVLLGIRVLSRIRPERM
HHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHH
LLEGVLRPALAALEPR
HHHHHHHHHHHHCCCC
>Mature Secondary Structure 
ARPRAFDENEVLDAAIRCFWTRGYEATSVRDLASSMGLTGASLYNAFGDKHALYERALE
CCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHH
RYVDESVADRIRRLEDPAIAPRAAIGAFLDEIVERSLNDPDMKGCMVVNAAVELGPHDPE
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCHH
LRAAAGRTLGEIEAFFRRRVAAGQKDGAINPDQTAEDLARMLLGVLLGIRVLSRIRPERM
HHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHH
LLEGVLRPALAALEPR
HHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]