| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154244920
Identifier: 154244920
GI number: 154244920
Start: 1087813
End: 1088364
Strand: Reverse
Name: 154244920
Synonym: Xaut_0970
Alternate gene names: NA
Gene position: 1088364-1087813 (Counterclockwise)
Preceding gene: 154244922
Following gene: 154244919
Centisome position: 20.5
GC content: 70.29
Gene sequence:
>552_bases ATGAGCCGCATTCCCGCCCTCGATCCCGCCACCGCTACCGGCAAGGCCAAGGATCTTCTCGCCGCCGTCGCCGCCAAGTT CGGAGCGACCCCCAACCTGTTCAAGGTTGCGGCCCGCTCGCCGGCGTCCCTCGAAGCCCTCATCGGCCTGTCCGGCGCCC TCGGCGGCGGCGCGCTGCCGGCCAAGATCCGCGAGAGCCTCGCTATTGCCGTGGCCGAGGTGAATGGCTGCGACTATTGC CTCTCCGCCCATTCGCTCATCGGCAAGGGCGCCGGCCTCAGCGACGCCGACATCAGCCAGGCCCGTTCCGGCCGCGCCAC CGACGGCAAGGCCGAAGCCGCCCTCGCCTTCGCCCGCGCGGTGGTCGCGAGCCGCGGCAAGGTGAGCGATGGAGACCTCT CCCAGGCCCGCCAGGCCGGGCTCGGCGACGGCGATATCGTGGAGATCGTGGCGCATGTCGCCATGAACATCTTCACCAAC TACCTCAACAACGTCGCGGAAACCGAGATCGACTTCCCGGTGGTGCGCTCCGGCGCTCCGCGCGCGGCCTGA
Upstream 100 bases:
>100_bases CACCACGGCGCCCCACGAAGAGCCGGACCCGACGCAGCCGCAGCGGCTTCGTCACCGCCTCAGCCCCCCGCCCGGGGACG CCGAAGGAAGGATCAATCCC
Downstream 100 bases:
>100_bases CATTCCATCGACCGGGACCGTCATGCGGTCCCGGCCTCCCTCTGGAGGACTTGCCATGTCTGATCCGTCAGATCCGCTCA ATTCGGCGCCTGCCAGCGAC
Product: alkylhydroperoxidase
Products: NA
Alternate protein names: Alkylhydroperoxidase Like Protein AhpD Family; Alkylhydroperoxidase AhpD Core; Peroxidase-Related; Carboxymuconolactone Decarboxylase; Alkylhydroperoxidase AhpD Family Core Domain Protein; Carboxymuconolactone Decarboxylase Family Protein; Alkylhydroperoxidase-Like Protein AhpD Family; Alpha/Beta Hydrolase; 24 KDa Macrophage-Induced Protein; Carboxymuconolactone Decarboxylase Family; Alkylhydroperoxidase-Like Protein; Mip Protein; MIP-(Macrophage Infectivity Potentiator)-Like Protein; Macrophage Infectivity Potentiator-Related Protein; Antioxydant Protein; Peroxidase; Peroxidase-Like Protein; Alkylhydroperoxidase Like Protein AhpD Family Protein
Number of amino acids: Translated: 183; Mature: 182
Protein sequence:
>183_residues MSRIPALDPATATGKAKDLLAAVAAKFGATPNLFKVAARSPASLEALIGLSGALGGGALPAKIRESLAIAVAEVNGCDYC LSAHSLIGKGAGLSDADISQARSGRATDGKAEAALAFARAVVASRGKVSDGDLSQARQAGLGDGDIVEIVAHVAMNIFTN YLNNVAETEIDFPVVRSGAPRAA
Sequences:
>Translated_183_residues MSRIPALDPATATGKAKDLLAAVAAKFGATPNLFKVAARSPASLEALIGLSGALGGGALPAKIRESLAIAVAEVNGCDYC LSAHSLIGKGAGLSDADISQARSGRATDGKAEAALAFARAVVASRGKVSDGDLSQARQAGLGDGDIVEIVAHVAMNIFTN YLNNVAETEIDFPVVRSGAPRAA >Mature_182_residues SRIPALDPATATGKAKDLLAAVAAKFGATPNLFKVAARSPASLEALIGLSGALGGGALPAKIRESLAIAVAEVNGCDYCL SAHSLIGKGAGLSDADISQARSGRATDGKAEAALAFARAVVASRGKVSDGDLSQARQAGLGDGDIVEIVAHVAMNIFTNY LNNVAETEIDFPVVRSGAPRAA
Specific function: Unknown
COG id: COG2128
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18355; Mature: 18224
Theoretical pI: Translated: 7.42; Mature: 7.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRIPALDPATATGKAKDLLAAVAAKFGATPNLFKVAARSPASLEALIGLSGALGGGALP CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHCCCCCCCCCC AKIRESLAIAVAEVNGCDYCLSAHSLIGKGAGLSDADISQARSGRATDGKAEAALAFARA HHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHH VVASRGKVSDGDLSQARQAGLGDGDIVEIVAHVAMNIFTNYLNNVAETEIDFPVVRSGAP HHHHCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC RAA CCC >Mature Secondary Structure SRIPALDPATATGKAKDLLAAVAAKFGATPNLFKVAARSPASLEALIGLSGALGGGALP CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHCCCCCCCCCC AKIRESLAIAVAEVNGCDYCLSAHSLIGKGAGLSDADISQARSGRATDGKAEAALAFARA HHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHH VVASRGKVSDGDLSQARQAGLGDGDIVEIVAHVAMNIFTNYLNNVAETEIDFPVVRSGAP HHHHCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC RAA CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA