| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is mhpE [C]
Identifier: 154244888
GI number: 154244888
Start: 1057634
End: 1058668
Strand: Direct
Name: mhpE [C]
Synonym: Xaut_0938
Alternate gene names: 154244888
Gene position: 1057634-1058668 (Clockwise)
Preceding gene: 154244887
Following gene: 154244889
Centisome position: 19.92
GC content: 68.12
Gene sequence:
>1035_bases ATGGCCCGTCCCAACAAAGACAAGCTCTATATCCAGGACGTGACCCTGCGCGACGGCATGCACGCGCTCAGGCACCAGTA CGACCTTGCGGCGACGCGAGCCATCGCCCGGGCTCTCGACCGCGCCAGGGTGGACGCCATCGAGATCAGCCACGGCGACG GCCTCACCGGCTCCACCTTCAACTACGGCTTCGGCGCCCATGACGACGCCGAGTGGATCGCCGCGGTGGCGGAGGAATGC AGCCATGCCGTGGTCACCGTGTTGCTCATTCCGGGCATCGGCACGGTGCATGATCTCAAGCATGCCTATGAGGCCGGCGC GCGCTCGGTGCGCGTGTGCACCCATTGCACCGAGGCTGACGTGTCGCGCCAGCACATCGAGGCAGCCCGTGAGCTGGGCA TGGACACGGCGACCTTCCTGATGATGGCCCACATGATCCCGCCCGAGGCCCTCGCGGAGCAGGCCAGGCTCATGGAGAGC TATGGCGCGGAATGCGTCTATGTGACGGATTCCGCCGGTGCCCTGCTGCCGGAAGACTATACGGCGCGGGTGAAGACCCT GCGCGACGCGCTCAGGCCCGAAACCGAAATCGGCGTTCACACCCACCACAACCTCACGCTCGGCATCGCCAATGCGGTGG CGGGTATCGAGGCCGGCGCCGTGCGCGTGGATGCCTCGCTGGCCGGCATGGGCGCCGGGGCGGGCAATGCGCCGCTGGAA GCCCTCATCGCGGTGCTCAACCGCAAGGGCATCGACACCGGCTGTGACCTCTACGCGCTGATGGACGCCGCCGATGATCT GGTGCGCCCGCTGCAGGACCGCCCGGTGCGGGTGGACCGGGAGAGCCTCTCGCTGGGCTATGCCGGTGTCTATTCGAGCT TCCTGCGCCACGCGGAGAACGCCGCACAGACCTACGGCGTGGACACCCGGGAAATCCTCTCCGAACTCGGCCGCCGCCGC ATGGTGGGCGGGCAGGAGGACATGATCGTCGACGTTGCCCTCGACCTCGCCGAGGCGAAGGCCGCCGTCGCCTGA
Upstream 100 bases:
>100_bases ATCTGCCGGCCTATGCCGGCAACCTCGACATCATGACCTCTGCCGCGCTGGTGACCGCTGATCGCTGGGCCGCGCGCAGG CTTGCGAAGGAGGCCGCGTG
Downstream 100 bases:
>100_bases CAACCGCATCGCAAGTCCGGCAGGGCGCTCCCCGTTCGGGATGCGCCCTGCCGTGCCCGCGACACAACCTGAAACCGCCG GGGATCATCGGCGGATGCAT
Product: pyruvate carboxyltransferase
Products: NA
Alternate protein names: HOA; 4-hydroxy-2-keto-pentanoic acid aldolase; 4-hydroxy-2-oxopentanoate aldolase
Number of amino acids: Translated: 344; Mature: 343
Protein sequence:
>344_residues MARPNKDKLYIQDVTLRDGMHALRHQYDLAATRAIARALDRARVDAIEISHGDGLTGSTFNYGFGAHDDAEWIAAVAEEC SHAVVTVLLIPGIGTVHDLKHAYEAGARSVRVCTHCTEADVSRQHIEAARELGMDTATFLMMAHMIPPEALAEQARLMES YGAECVYVTDSAGALLPEDYTARVKTLRDALRPETEIGVHTHHNLTLGIANAVAGIEAGAVRVDASLAGMGAGAGNAPLE ALIAVLNRKGIDTGCDLYALMDAADDLVRPLQDRPVRVDRESLSLGYAGVYSSFLRHAENAAQTYGVDTREILSELGRRR MVGGQEDMIVDVALDLAEAKAAVA
Sequences:
>Translated_344_residues MARPNKDKLYIQDVTLRDGMHALRHQYDLAATRAIARALDRARVDAIEISHGDGLTGSTFNYGFGAHDDAEWIAAVAEEC SHAVVTVLLIPGIGTVHDLKHAYEAGARSVRVCTHCTEADVSRQHIEAARELGMDTATFLMMAHMIPPEALAEQARLMES YGAECVYVTDSAGALLPEDYTARVKTLRDALRPETEIGVHTHHNLTLGIANAVAGIEAGAVRVDASLAGMGAGAGNAPLE ALIAVLNRKGIDTGCDLYALMDAADDLVRPLQDRPVRVDRESLSLGYAGVYSSFLRHAENAAQTYGVDTREILSELGRRR MVGGQEDMIVDVALDLAEAKAAVA >Mature_343_residues ARPNKDKLYIQDVTLRDGMHALRHQYDLAATRAIARALDRARVDAIEISHGDGLTGSTFNYGFGAHDDAEWIAAVAEECS HAVVTVLLIPGIGTVHDLKHAYEAGARSVRVCTHCTEADVSRQHIEAARELGMDTATFLMMAHMIPPEALAEQARLMESY GAECVYVTDSAGALLPEDYTARVKTLRDALRPETEIGVHTHHNLTLGIANAVAGIEAGAVRVDASLAGMGAGAGNAPLEA LIAVLNRKGIDTGCDLYALMDAADDLVRPLQDRPVRVDRESLSLGYAGVYSSFLRHAENAAQTYGVDTREILSELGRRRM VGGQEDMIVDVALDLAEAKAAVA
Specific function: Catalyzes the retro-aldol cleavage of 4-hydroxy-2- oxopentanoate to pyruvate and acetaldehyde. Is involved in the meta-cleavage pathway for the degradation of aromatic compounds
COG id: COG0119
COG function: function code E; Isopropylmalate/homocitrate/citramalate synthases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 4-hydroxy-2-oxovalerate aldolase family
Homologues:
Organism=Escherichia coli, GI1786548, Length=336, Percent_Identity=68.4523809523809, Blast_Score=456, Evalue=1e-130,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HOA_XANP2 (A7IDU6)
Other databases:
- EMBL: CP000781 - RefSeq: YP_001415846.1 - ProteinModelPortal: A7IDU6 - SMR: A7IDU6 - STRING: A7IDU6 - GeneID: 5423187 - GenomeReviews: CP000781_GR - KEGG: xau:Xaut_0938 - eggNOG: COG0119 - HOGENOM: HBG300122 - OMA: ATCVYVV - ProtClustDB: CLSK2401143 - BioCyc: XAUT78245:XAUT_0938-MONOMER - HAMAP: MF_01656 - InterPro: IPR017629 - InterPro: IPR013785 - InterPro: IPR012425 - InterPro: IPR000891 - Gene3D: G3DSA:3.20.20.70 - ProDom: PD005364 - TIGRFAMs: TIGR03217
Pfam domain/function: PF07836 DmpG_comm; PF00682 HMGL-like
EC number: =4.1.3.39
Molecular weight: Translated: 36909; Mature: 36778
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: PS50991 PYR_CT
Important sites: BINDING 171-171 BINDING 200-200 BINDING 291-291
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARPNKDKLYIQDVTLRDGMHALRHQYDLAATRAIARALDRARVDAIEISHGDGLTGSTF CCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCC NYGFGAHDDAEWIAAVAEECSHAVVTVLLIPGIGTVHDLKHAYEAGARSVRVCTHCTEAD CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHCCHHH VSRQHIEAARELGMDTATFLMMAHMIPPEALAEQARLMESYGAECVYVTDSAGALLPEDY HHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHH TARVKTLRDALRPETEIGVHTHHNLTLGIANAVAGIEAGAVRVDASLAGMGAGAGNAPLE HHHHHHHHHHHCCCCCCCCEECCCEEEEHHHHHHCCCCCCEEECHHHHCCCCCCCCCHHH ALIAVLNRKGIDTGCDLYALMDAADDLVRPLQDRPVRVDRESLSLGYAGVYSSFLRHAEN HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEECHHHHHCCHHHHHHHHHHHHHH AAQTYGVDTREILSELGRRRMVGGQEDMIVDVALDLAEAKAAVA HHHHCCCCHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHCC >Mature Secondary Structure ARPNKDKLYIQDVTLRDGMHALRHQYDLAATRAIARALDRARVDAIEISHGDGLTGSTF CCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCC NYGFGAHDDAEWIAAVAEECSHAVVTVLLIPGIGTVHDLKHAYEAGARSVRVCTHCTEAD CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHCCHHH VSRQHIEAARELGMDTATFLMMAHMIPPEALAEQARLMESYGAECVYVTDSAGALLPEDY HHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHH TARVKTLRDALRPETEIGVHTHHNLTLGIANAVAGIEAGAVRVDASLAGMGAGAGNAPLE HHHHHHHHHHHCCCCCCCCEECCCEEEEHHHHHHCCCCCCEEECHHHHCCCCCCCCCHHH ALIAVLNRKGIDTGCDLYALMDAADDLVRPLQDRPVRVDRESLSLGYAGVYSSFLRHAEN HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEECHHHHHCCHHHHHHHHHHHHHH AAQTYGVDTREILSELGRRRMVGGQEDMIVDVALDLAEAKAAVA HHHHCCCCHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA