Click here to switch to the map view.

The map label for this gene is fadF [H]

Identifier: 154244868

GI number: 154244868

Start: 1033985

End: 1036147

Strand: Direct

Name: fadF [H]

Synonym: Xaut_0918

Alternate gene names: 154244868

Gene position: 1033985-1036147 (Clockwise)

Preceding gene: 154244867

Following gene: 154244869

Centisome position: 19.48

GC content: 67.59

Gene sequence:

>2163_bases
ATGATTCCGAACGGCATCGAACCGTCCCAGATCACGCGCATCCTGTTCCAGGACTTTTCGCCCTGGATGCTGGCGCTCTT
CTATGTCTATGCCATCGGCGCCATCTTCGCGTTCTGCTGGGGCGTCTATGTGCAGGTCCGCAAGTATCGCAGCGGTCGCA
ACGGCGCGCGGCTGAGCTGGGCGAACCTTGGCCGGCGCCTCGCCGACACGGCAAAAGTGATCGCCTCCCACCGCACGCTG
CGGCGGCGGGATGCGGCGGCCGGGCGGCTGCATGCCTTCATCTTCTACGGCTTCACACTGCTCTTCATCGGCACCGCCAC
CATTACCTTGCAGGAAGACATTCTCGGCCCGCTTGTCGGCCTGAACTTCTGGCACGGGTATTTCTATCTGCTGTTCAAGC
TGGCCATGACCATTGCCGGCACCGGATTTATCTGCGGCCTCGCCTACATGATGTGGCGGCGGGGCTGGCTGCGCCCGCCG
AAACTCGACTACACCCGCCCCGACCGCACCCCGCAGGATGCCGACTTCTCCCGCGAGCGCTACCGCATGGAGGACTGGGC
CTTCCTGTGGACGCTGCTGCTCATCGGCATTACCGGCTTCCTGCTCTCCGGCGCGCGCATGGTGTGGCTCCAGGGCGATC
CGGCGGTGTGGGACACGCGGTGGTGGGCGCCGGTGGGCGCCAGCATCGCCGCCGGGCTGAAGGCCGTGGGCTTCACCAGC
GCCGGTGCCGGGGCGTTGCGCATGGGCCTTTGGTGGGTGCACGGAGTGCTGGCGCTCACCTTCATCGCCCTCATTCCCTA
TACCAAGGCCAAGCACATCTTCACTGCCGCCACCTCCTGGCTGCTGCGCGATTCCGATGCCGCGCGCCGGCTGCCGCTGG
GCGACCTCGACGCCGACCGCATCGGCTATCGCGAGCTGGGCGATGTGGCGAGCCGCTATCTGGTCCAGGCCGATGCCTGC
ACCAAGTGCGGCCGCTGCCACGAAGCCTGCCCGGCGCGGGCGGCCGGCTATCCGCTCTCCCCGCGCGACGTGGTACTGAC
CCTGCGTGAGCAGGCCAACGCCCATCTCGGCGAGGTGCTGCCGAAGCCGCGCGCGGCCGGCTGCGCCACCCCGCTCATCG
GCCTCGCCAGCGGCGAGATCCGGCCGGAGACGCTCTGGTCGTGCCGCCAGTGCGGCGCCTGCACGGAAATCTGCCCGGTG
GGGGTGGAGCACGTACCGCTCATCAACATGCTCCGCCGCACGCTGGTGGACGAAGGCGAGATGGACCCGGCGCTCCAGCG
CACTCTCGGCGCGGTGAACAAGACCGGCAATTGCTTCAACGAAAGTCGCCGCAAGCGGCCCAACTGGACCAAGGACCTGC
CCTTCAAGATCAAGGATGCGCGCAAGGAGCCGGTGGACGTGCTCTGGTTCGTGGGAGACTACGCAAGCTTCGATCCGCGC
AACCAGAAGGTCAGCCGCGCTTTCGCCCGCATCCTCCATGCCGCCGGCATCGACTTCGGCATCCTCTACGAGGGCGAGAC
CACCGCTGGCAACGATGTACGCCGCGTGGGCGAGGAAGGGCTGTTCCAGCAACTCGCCGAGGGCAATATCGCGACGCTGG
AAGGTTGCGCCTTCGCCCGCATCGTCACCACGGACCCGCACTCCTTCAACACGCTCAAGAACGAGTATCCGGACCTCGGC
GGCGCCTACACTGTGAGCCACGCCAGCGCCTTCCTGAAGGAGCTGATCGAGGAGGGCCGCATCGCCCCGGCCCGCAAGCT
GGACTTCACCGTCACCTATCACGACCCCTGCCATCTGGGTCGCCTGAACAAGGGCTATGACGCCCCGCGCGAAGTGCTGG
CCGCGACCGGGGTGAAGCTCGTGGAACTGGGCAAGAGCCGCGACAATTCCTTCTGCTGCGGCGGCGGTGGCGGGCGTGTG
TGGGTGCCCGATCCGCCCGGCACCACCAAGGCGGGCGAGATCCGCGCGCGGGAGGCGGCGGAGATCTCCGGCCTCGACGC
CCTGGTGGTCAACTGCCCCAAGTGCATGACCATGCTGGAAGACGCGGTGAAGACCACCGGCAATGAGCGCAACTTCCGTG
TGCTGGAGCTGACCGAGCTGCTCGCCGAGGCGCTCGAACCGGCGGAACCCGTCGCGCTCGCCGCCCCCGCAGCGGTCGTC
TGA

Upstream 100 bases:

>100_bases
GGCCCCAATGCCGCCGGTGGAACGGCGCGGCGCGTCGTGGCGGGCACGATCCCGCACGCGCAGGCACAGCCAACAAGAAG
ATCCAGAGGGCGAGCACCCC

Downstream 100 bases:

>100_bases
GCGATGGACGCGCCCGCCGACATGGCCGAGCTGACGGGTGCGCTTCTCGCCCGTGGGGATGCCTATCTGGCGCTGCCGGC
CTACGGCGCCGACGGCGCGC

Product: hypothetical protein

Products: FADH2; dihydroxy-acetone-phosphate [C]

Alternate protein names: NA

Number of amino acids: Translated: 720; Mature: 720

Protein sequence:

>720_residues
MIPNGIEPSQITRILFQDFSPWMLALFYVYAIGAIFAFCWGVYVQVRKYRSGRNGARLSWANLGRRLADTAKVIASHRTL
RRRDAAAGRLHAFIFYGFTLLFIGTATITLQEDILGPLVGLNFWHGYFYLLFKLAMTIAGTGFICGLAYMMWRRGWLRPP
KLDYTRPDRTPQDADFSRERYRMEDWAFLWTLLLIGITGFLLSGARMVWLQGDPAVWDTRWWAPVGASIAAGLKAVGFTS
AGAGALRMGLWWVHGVLALTFIALIPYTKAKHIFTAATSWLLRDSDAARRLPLGDLDADRIGYRELGDVASRYLVQADAC
TKCGRCHEACPARAAGYPLSPRDVVLTLREQANAHLGEVLPKPRAAGCATPLIGLASGEIRPETLWSCRQCGACTEICPV
GVEHVPLINMLRRTLVDEGEMDPALQRTLGAVNKTGNCFNESRRKRPNWTKDLPFKIKDARKEPVDVLWFVGDYASFDPR
NQKVSRAFARILHAAGIDFGILYEGETTAGNDVRRVGEEGLFQQLAEGNIATLEGCAFARIVTTDPHSFNTLKNEYPDLG
GAYTVSHASAFLKELIEEGRIAPARKLDFTVTYHDPCHLGRLNKGYDAPREVLAATGVKLVELGKSRDNSFCCGGGGGRV
WVPDPPGTTKAGEIRAREAAEISGLDALVVNCPKCMTMLEDAVKTTGNERNFRVLELTELLAEALEPAEPVALAAPAAVV

Sequences:

>Translated_720_residues
MIPNGIEPSQITRILFQDFSPWMLALFYVYAIGAIFAFCWGVYVQVRKYRSGRNGARLSWANLGRRLADTAKVIASHRTL
RRRDAAAGRLHAFIFYGFTLLFIGTATITLQEDILGPLVGLNFWHGYFYLLFKLAMTIAGTGFICGLAYMMWRRGWLRPP
KLDYTRPDRTPQDADFSRERYRMEDWAFLWTLLLIGITGFLLSGARMVWLQGDPAVWDTRWWAPVGASIAAGLKAVGFTS
AGAGALRMGLWWVHGVLALTFIALIPYTKAKHIFTAATSWLLRDSDAARRLPLGDLDADRIGYRELGDVASRYLVQADAC
TKCGRCHEACPARAAGYPLSPRDVVLTLREQANAHLGEVLPKPRAAGCATPLIGLASGEIRPETLWSCRQCGACTEICPV
GVEHVPLINMLRRTLVDEGEMDPALQRTLGAVNKTGNCFNESRRKRPNWTKDLPFKIKDARKEPVDVLWFVGDYASFDPR
NQKVSRAFARILHAAGIDFGILYEGETTAGNDVRRVGEEGLFQQLAEGNIATLEGCAFARIVTTDPHSFNTLKNEYPDLG
GAYTVSHASAFLKELIEEGRIAPARKLDFTVTYHDPCHLGRLNKGYDAPREVLAATGVKLVELGKSRDNSFCCGGGGGRV
WVPDPPGTTKAGEIRAREAAEISGLDALVVNCPKCMTMLEDAVKTTGNERNFRVLELTELLAEALEPAEPVALAAPAAVV
>Mature_720_residues
MIPNGIEPSQITRILFQDFSPWMLALFYVYAIGAIFAFCWGVYVQVRKYRSGRNGARLSWANLGRRLADTAKVIASHRTL
RRRDAAAGRLHAFIFYGFTLLFIGTATITLQEDILGPLVGLNFWHGYFYLLFKLAMTIAGTGFICGLAYMMWRRGWLRPP
KLDYTRPDRTPQDADFSRERYRMEDWAFLWTLLLIGITGFLLSGARMVWLQGDPAVWDTRWWAPVGASIAAGLKAVGFTS
AGAGALRMGLWWVHGVLALTFIALIPYTKAKHIFTAATSWLLRDSDAARRLPLGDLDADRIGYRELGDVASRYLVQADAC
TKCGRCHEACPARAAGYPLSPRDVVLTLREQANAHLGEVLPKPRAAGCATPLIGLASGEIRPETLWSCRQCGACTEICPV
GVEHVPLINMLRRTLVDEGEMDPALQRTLGAVNKTGNCFNESRRKRPNWTKDLPFKIKDARKEPVDVLWFVGDYASFDPR
NQKVSRAFARILHAAGIDFGILYEGETTAGNDVRRVGEEGLFQQLAEGNIATLEGCAFARIVTTDPHSFNTLKNEYPDLG
GAYTVSHASAFLKELIEEGRIAPARKLDFTVTYHDPCHLGRLNKGYDAPREVLAATGVKLVELGKSRDNSFCCGGGGGRV
WVPDPPGTTKAGEIRAREAAEISGLDALVVNCPKCMTMLEDAVKTTGNERNFRVLELTELLAEALEPAEPVALAAPAAVV

Specific function: Electron Transfer Protein; May Also Function As The Membrane Anchor For The Glpab Dimer. [C]

COG id: COG0247

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR004017
- InterPro:   IPR012285
- InterPro:   IPR009051 [H]

Pfam domain/function: PF02754 CCG [H]

EC number: NA

Molecular weight: Translated: 79432; Mature: 79432

Theoretical pI: Translated: 8.43; Mature: 8.43

Prosite motif: PS00687 ALDEHYDE_DEHYDR_GLU ; PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPNGIEPSQITRILFQDFSPWMLALFYVYAIGAIFAFCWGVYVQVRKYRSGRNGARLSW
CCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEH
ANLGRRLADTAKVIASHRTLRRRDAAAGRLHAFIFYGFTLLFIGTATITLQEDILGPLVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHH
LNFWHGYFYLLFKLAMTIAGTGFICGLAYMMWRRGWLRPPKLDYTRPDRTPQDADFSRER
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHH
YRMEDWAFLWTLLLIGITGFLLSGARMVWLQGDPAVWDTRWWAPVGASIAAGLKAVGFTS
HHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCC
AGAGALRMGLWWVHGVLALTFIALIPYTKAKHIFTAATSWLLRDSDAARRLPLGDLDADR
CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCHHH
IGYRELGDVASRYLVQADACTKCGRCHEACPARAAGYPLSPRDVVLTLREQANAHLGEVL
CCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCHHHEEEEHHHHCCHHHHHC
PKPRAAGCATPLIGLASGEIRPETLWSCRQCGACTEICPVGVEHVPLINMLRRTLVDEGE
CCCCCCCCCCCHHCCCCCCCCHHHHHHHHHCCCCHHHCCCCCCHHHHHHHHHHHHHCCCC
MDPALQRTLGAVNKTGNCFNESRRKRPNWTKDLPFKIKDARKEPVDVLWFVGDYASFDPR
CCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCEEECCCCCCCCEEEEEECCCCCCCCC
NQKVSRAFARILHAAGIDFGILYEGETTAGNDVRRVGEEGLFQQLAEGNIATLEGCAFAR
HHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCEEEE
IVTTDPHSFNTLKNEYPDLGGAYTVSHASAFLKELIEEGRIAPARKLDFTVTYHDPCHLG
EEECCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCC
RLNKGYDAPREVLAATGVKLVELGKSRDNSFCCGGGGGRVWVPDPPGTTKAGEIRAREAA
CCCCCCCHHHHHHHHCCCHHHHHCCCCCCCEEECCCCCEEECCCCCCCCCCCCCHHHHHH
EISGLDALVVNCPKCMTMLEDAVKTTGNERNFRVLELTELLAEALEPAEPVALAAPAAVV
HHCCCHHHHHCCHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHCCCCCCEEECCCCCCC
>Mature Secondary Structure
MIPNGIEPSQITRILFQDFSPWMLALFYVYAIGAIFAFCWGVYVQVRKYRSGRNGARLSW
CCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEH
ANLGRRLADTAKVIASHRTLRRRDAAAGRLHAFIFYGFTLLFIGTATITLQEDILGPLVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHH
LNFWHGYFYLLFKLAMTIAGTGFICGLAYMMWRRGWLRPPKLDYTRPDRTPQDADFSRER
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHH
YRMEDWAFLWTLLLIGITGFLLSGARMVWLQGDPAVWDTRWWAPVGASIAAGLKAVGFTS
HHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCC
AGAGALRMGLWWVHGVLALTFIALIPYTKAKHIFTAATSWLLRDSDAARRLPLGDLDADR
CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCHHH
IGYRELGDVASRYLVQADACTKCGRCHEACPARAAGYPLSPRDVVLTLREQANAHLGEVL
CCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCHHHEEEEHHHHCCHHHHHC
PKPRAAGCATPLIGLASGEIRPETLWSCRQCGACTEICPVGVEHVPLINMLRRTLVDEGE
CCCCCCCCCCCHHCCCCCCCCHHHHHHHHHCCCCHHHCCCCCCHHHHHHHHHHHHHCCCC
MDPALQRTLGAVNKTGNCFNESRRKRPNWTKDLPFKIKDARKEPVDVLWFVGDYASFDPR
CCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCEEECCCCCCCCEEEEEECCCCCCCCC
NQKVSRAFARILHAAGIDFGILYEGETTAGNDVRRVGEEGLFQQLAEGNIATLEGCAFAR
HHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCEEEE
IVTTDPHSFNTLKNEYPDLGGAYTVSHASAFLKELIEEGRIAPARKLDFTVTYHDPCHLG
EEECCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCC
RLNKGYDAPREVLAATGVKLVELGKSRDNSFCCGGGGGRVWVPDPPGTTKAGEIRAREAA
CCCCCCCHHHHHHHHCCCHHHHHCCCCCCCEEECCCCCEEECCCCCCCCCCCCCHHHHHH
EISGLDALVVNCPKCMTMLEDAVKTTGNERNFRVLELTELLAEALEPAEPVALAAPAAVV
HHCCCHHHHHCCHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHCCCCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: FAD; glycerol-3-phosphate [C]

Specific reaction: FAD + glycerol-3-phosphate = FADH2 + dihydroxy-acetone-phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]