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The map label for this gene is kstR2 [H]

Identifier: 154244578

GI number: 154244578

Start: 702675

End: 703322

Strand: Direct

Name: kstR2 [H]

Synonym: Xaut_0626

Alternate gene names: 154244578

Gene position: 702675-703322 (Clockwise)

Preceding gene: 154244573

Following gene: 154244580

Centisome position: 13.24

GC content: 62.35

Gene sequence:

>648_bases
ATGCCACGCAAGACCGCCGCCAGGAAGACCGCCGCCAAAGGCGAGGAGAGGCGGCAGAACAGGTTCGCCAGCGAACTGTT
CCAGGGTGAACTCAGTCCCCGCCACCGGGACGTGCTGGAGGCGGCGGCAAGCCTGTTCGCGGAGCGCGGCTACGCGGCCA
CCTCGGTGCGCGAGATCGGCGAACGGGTCGGACTGCTCGGGGGCTCGCTCTACCACTACATCAAGTCGAAGGAAGCGCTG
TTCGTGCGCATCCACGACATCGCGCTGGAAGTGGCGGGTGACCGCATTCGAGCCGCCGTCGAGGTGCAGACCGACCCCTG
GGACCGGCTGGAGGCGGCATGCGTGACCATGCTGGAGATCCAGCTCGACCCCCATTCCATCACGATGCCACTCATGAACG
ACCTTCAGGCGGTCCCCGCCGAGGTGCGCGAGCAGCTTATCGCCCGGCGCGACAGCTTCGAGAAGATCTTCTCGGATCTT
GTCGCTGATCTGCCCTTGAGTCCGCAGATCGATCGCAGCGTATACCGGCTTCTTCTGCTAACGCTGCTCAATAATACCAG
CTCATGGTATCGTGAGGGACGCCTGTCGCCCAAAGAGATCGCTAGGCAGATCGTTTTTATATTCCATCAACGCGCCGAAT
ATAACTAG

Upstream 100 bases:

>100_bases
CGGAGGTCGCACTAAGACAGGACAAAGCGAAATCAGGGGCGCGGACCGGATGCCCCCGGTCGCGACAGGCCGCCAGAATC
GGGACCGCAGGACCAGGTGA

Downstream 100 bases:

>100_bases
GCGAGGACAGGAAGCGTACGGACGGGGCCTCGTACGCATCGATCCCGATGCGCGTTGCGGCGAGCTTGGGGGCTGCGGGG
CGTTTTCTGGGCGGCGGTCG

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 215; Mature: 214

Protein sequence:

>215_residues
MPRKTAARKTAAKGEERRQNRFASELFQGELSPRHRDVLEAAASLFAERGYAATSVREIGERVGLLGGSLYHYIKSKEAL
FVRIHDIALEVAGDRIRAAVEVQTDPWDRLEAACVTMLEIQLDPHSITMPLMNDLQAVPAEVREQLIARRDSFEKIFSDL
VADLPLSPQIDRSVYRLLLLTLLNNTSSWYREGRLSPKEIARQIVFIFHQRAEYN

Sequences:

>Translated_215_residues
MPRKTAARKTAAKGEERRQNRFASELFQGELSPRHRDVLEAAASLFAERGYAATSVREIGERVGLLGGSLYHYIKSKEAL
FVRIHDIALEVAGDRIRAAVEVQTDPWDRLEAACVTMLEIQLDPHSITMPLMNDLQAVPAEVREQLIARRDSFEKIFSDL
VADLPLSPQIDRSVYRLLLLTLLNNTSSWYREGRLSPKEIARQIVFIFHQRAEYN
>Mature_214_residues
PRKTAARKTAAKGEERRQNRFASELFQGELSPRHRDVLEAAASLFAERGYAATSVREIGERVGLLGGSLYHYIKSKEALF
VRIHDIALEVAGDRIRAAVEVQTDPWDRLEAACVTMLEIQLDPHSITMPLMNDLQAVPAEVREQLIARRDSFEKIFSDLV
ADLPLSPQIDRSVYRLLLLTLLNNTSSWYREGRLSPKEIARQIVFIFHQRAEYN

Specific function: Controls the expression of a small regulon that may play a role in the utilization of cholesterol [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR015893
- InterPro:   IPR011075
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 24503; Mature: 24372

Theoretical pI: Translated: 7.72; Mature: 7.72

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRKTAARKTAAKGEERRQNRFASELFQGELSPRHRDVLEAAASLFAERGYAATSVREIG
CCCCHHHHHHHHCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHH
ERVGLLGGSLYHYIKSKEALFVRIHDIALEVAGDRIRAAVEVQTDPWDRLEAACVTMLEI
HHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHCCHHEEEEEECCCCHHHHHHHHHHHHHE
QLDPHSITMPLMNDLQAVPAEVREQLIARRDSFEKIFSDLVADLPLSPQIDRSVYRLLLL
EECCCCEEHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
TLLNNTSSWYREGRLSPKEIARQIVFIFHQRAEYN
HHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PRKTAARKTAAKGEERRQNRFASELFQGELSPRHRDVLEAAASLFAERGYAATSVREIG
CCCHHHHHHHHCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHH
ERVGLLGGSLYHYIKSKEALFVRIHDIALEVAGDRIRAAVEVQTDPWDRLEAACVTMLEI
HHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHCCHHEEEEEECCCCHHHHHHHHHHHHHE
QLDPHSITMPLMNDLQAVPAEVREQLIARRDSFEKIFSDLVADLPLSPQIDRSVYRLLLL
EECCCCEEHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
TLLNNTSSWYREGRLSPKEIARQIVFIFHQRAEYN
HHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]