| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154244554
Identifier: 154244554
GI number: 154244554
Start: 673279
End: 674013
Strand: Direct
Name: 154244554
Synonym: Xaut_0599
Alternate gene names: NA
Gene position: 673279-674013 (Clockwise)
Preceding gene: 154244553
Following gene: 154244555
Centisome position: 12.68
GC content: 66.67
Gene sequence:
>735_bases ATGATCCGCCGTTCATTGCGGGCGGTGCTCGTCGCCGCGCCGCTTCTTTTCTGCCCGTTCGCGCCGGCCGTGGCGCAGTA CGTGGTCTACGACCCCTCCAACTATGCCCAGAACGTCCTTCAAGCTGCTCGGGCGCTACAGCAGGTCACCAACCAGATCA CCTCGCTTCAGAACGAAGCGCAGATGCTGATCAATCAGACCCGCAATCTTGCGAACCTGCCTTATTCCTCTATCAGCGCA TTCCAGCAGGCGGCCCAGCGCACCCAGCAATTGCTCGGTCAGGCCCAGAAGATCGCCTATGACGTCACCGCCATCGACCG GGCGTTTCAGGGCCAGTATGGCTCGGTCTCCCTGAGCAGTTCGGATGCCGCCCTTGTCACCCAGGCGAAGAGCCGCTGGG AGACCACGGTCGCCGGCCTCCAGGATGCGCTGCGGGTGCAGGCGGGCGTCGTCGGCAATCTCGACACCGGCCGCTCGCAG GCCTCGACACTGGTCGGCCAGAGCCAGGCGGCGAGCGGCGCGCTGCAGGCCATGCAGGCGGGCAACCAGCTTCAGGCGCT CCAGGCCCAGCAGCTCTCCGACCTCACCGCCGTGATCACGGCGAACGGCCGCGCACAGGCCCTGTCCGAAGCTGAGCGGG CGACGGCGGTGTCGGAAGGGCAGGAGCGCTACCGGCGCTTCTCCACCCGGTCGAGCTACCAGCCTGCCGCCGTCACCATG TTCCACGGCAAGTGA
Upstream 100 bases:
>100_bases AGCATGGGCGCGACGGCTTCTTCGCCCCCTGGCTGCGGCATCGCGGCCTCGGCTGGGCCGCCGATCTCATCCTCACCCTC GACAATCTGGAGCCACGCTC
Downstream 100 bases:
>100_bases GGCGTGGCCGTGGACCGGGACACCACGCTTCGAACCCTCCTCGTCGCCGGCCTGGTGGGCACGGTGATCGCAGCCCTTGC CGTCTCCTCAGGCCGGGAAA
Product: conjugal transfer protein TrbJ
Products: NA
Alternate protein names: P-Type Conjugative Transfer Protein TrbJ; Conjugal Transfer TrbJ Signal Peptide Protein; Conjugal Transfer Protein Trbj; Conjugal Transfer Protein; P-Type Conjugative Transfer Protein Trbj; Conjugative Transfer Protein TrbJ
Number of amino acids: Translated: 244; Mature: 244
Protein sequence:
>244_residues MIRRSLRAVLVAAPLLFCPFAPAVAQYVVYDPSNYAQNVLQAARALQQVTNQITSLQNEAQMLINQTRNLANLPYSSISA FQQAAQRTQQLLGQAQKIAYDVTAIDRAFQGQYGSVSLSSSDAALVTQAKSRWETTVAGLQDALRVQAGVVGNLDTGRSQ ASTLVGQSQAASGALQAMQAGNQLQALQAQQLSDLTAVITANGRAQALSEAERATAVSEGQERYRRFSTRSSYQPAAVTM FHGK
Sequences:
>Translated_244_residues MIRRSLRAVLVAAPLLFCPFAPAVAQYVVYDPSNYAQNVLQAARALQQVTNQITSLQNEAQMLINQTRNLANLPYSSISA FQQAAQRTQQLLGQAQKIAYDVTAIDRAFQGQYGSVSLSSSDAALVTQAKSRWETTVAGLQDALRVQAGVVGNLDTGRSQ ASTLVGQSQAASGALQAMQAGNQLQALQAQQLSDLTAVITANGRAQALSEAERATAVSEGQERYRRFSTRSSYQPAAVTM FHGK >Mature_244_residues MIRRSLRAVLVAAPLLFCPFAPAVAQYVVYDPSNYAQNVLQAARALQQVTNQITSLQNEAQMLINQTRNLANLPYSSISA FQQAAQRTQQLLGQAQKIAYDVTAIDRAFQGQYGSVSLSSSDAALVTQAKSRWETTVAGLQDALRVQAGVVGNLDTGRSQ ASTLVGQSQAASGALQAMQAGNQLQALQAQQLSDLTAVITANGRAQALSEAERATAVSEGQERYRRFSTRSSYQPAAVTM FHGK
Specific function: Unknown
COG id: COG5314
COG function: function code U; Conjugal transfer/entry exclusion protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26154; Mature: 26154
Theoretical pI: Translated: 10.01; Mature: 10.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRRSLRAVLVAAPLLFCPFAPAVAQYVVYDPSNYAQNVLQAARALQQVTNQITSLQNEA CCHHHHHHHHHHHHHHHHCCHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH QMLINQTRNLANLPYSSISAFQQAAQRTQQLLGQAQKIAYDVTAIDRAFQGQYGSVSLSS HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECC SDAALVTQAKSRWETTVAGLQDALRVQAGVVGNLDTGRSQASTLVGQSQAASGALQAMQA CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC GNQLQALQAQQLSDLTAVITANGRAQALSEAERATAVSEGQERYRRFSTRSSYQPAAVTM CCHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE FHGK ECCC >Mature Secondary Structure MIRRSLRAVLVAAPLLFCPFAPAVAQYVVYDPSNYAQNVLQAARALQQVTNQITSLQNEA CCHHHHHHHHHHHHHHHHCCHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH QMLINQTRNLANLPYSSISAFQQAAQRTQQLLGQAQKIAYDVTAIDRAFQGQYGSVSLSS HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECC SDAALVTQAKSRWETTVAGLQDALRVQAGVVGNLDTGRSQASTLVGQSQAASGALQAMQA CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC GNQLQALQAQQLSDLTAVITANGRAQALSEAERATAVSEGQERYRRFSTRSSYQPAAVTM CCHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE FHGK ECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA