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The map label for this gene is trbE [H]

Identifier: 154244553

GI number: 154244553

Start: 670853

End: 673282

Strand: Direct

Name: trbE [H]

Synonym: Xaut_0598

Alternate gene names: 154244553

Gene position: 670853-673282 (Clockwise)

Preceding gene: 154244552

Following gene: 154244554

Centisome position: 12.64

GC content: 67.28

Gene sequence:

>2430_bases
ATGATGAACCTCGCCGAGTATCGCCGACACGGGAGCCGGCTCGCGGACTATTTGCCGTGGGCGGCCCTGGTCGGTCCTGG
CCTCGTCCTCAACAAGGATGGCAGCTTCCAGCGCACCGCGTGCTTCCGTGGGCCAGACCTCGAATCCGCGGTGCCAGCTG
AGCTGGTGGCGGTGGCGGGTCGCCTCAACAGCACCTTCCGCCGCCTCGGCTCCGGCTGGGCACTGTTCGTGGAAGCCCAG
CGGCACGAGGCGGGAGCCTATCCCGAGAGCCTGTTTCCCGATCCTGCTTCCGCGTTGGTGGATGCCGAGCGGAAGGCCGG
GTTCGCCGAGGCGGGCAGTCATTTCGAGTCGAGCTATTTCCTCACCTTCTGTTGGCTCCCCCCAGCGGAGGATGCCGCAC
GGGCGGAGAGCTGGCTCTATGAGGGGCGTGGGCGCGAGGGTGTCGATCCTCATGAAGCATTGGATGGCTTCGCCGATCGG
ACAGACCGGGTGCTTCGGCTGGTCGAGAGCTTCATGCCGGAGTGCCACTGGCTCGATGACGCCGAGACCCTGACCTATCT
CCACGGCTGCGTCTCGATCCGGCGCCAGCGGGTCCGTGTCCCCGAGACGCCCATGTATCTCGATGCGCTCCTCGCCGACC
AGCCGCTCACCGGCGGGCTGGAGCCGATGCTCGGGGACCAGCACCTGCGCGTGCTGACCATCGTGGGCTTTCCCACGGCA
ACGACGCCGGGGATCCTCGACGATCTCAACCGGCTGGCGTTTCCCTATCGCTGGTCGACCCGCGCCATCCTCCTCGACAA
GACCGACGCCACCCGGCTCCTCACGAAGATCCGCCGGCAGTGGTTCGCCAAGCGCAAGTCCATTGCCGCCATCCTCAAGG
AGGTGATGACCAACGAAGCTTCGGTGCTGGTGGATTCGGATGCCGACAACAAGGCGGAGGACGCCGACCTCGCCTTGCAG
GAGCTCGGCGCCGACCATGCCGGCATCGCCTATATCACCGCCATGGTGACAGTCTGGGACGCCGATCCCCGCGTCGCCGA
CGAGAAGCTCCGGCTGGTGGAGAAGGTGATCCAGGGCCGGGACTTCACCGCCATGGCGGAGACCATCAATGCAGTGGATG
CCTGGCTGGGCAGCCTGCCCGGGCACGTCTACGCCAATGTCCGCCAGCCTCCCGTCTCCACCCTGAACCTCGCGCACATG
ATCCCGCTCTCCGCGGTCTGGGCGGGCGATGCGCAGGACGCGCATTTTGCGGCGCCGCCCTTGTTCTACGGCAAGACGGA
AGGCTCGACCCCGTTCCGCTTCACGCTCCACGTGGGGGATGTGGGGCACACGCTGGTGGTGGGGCCGACCGGTGCTGGCA
AGTCCGTGCTGCTGGCGCTCATGGCCTTGCAGTTCCGGCGCTATGCCGGCTCGCAGGTGTTCGCCTTCGATTTCGGCGGC
AGCATCCGGGCGGCGGCCCTCGCCATGGGTGGCGACTGGCACGATCTGGGCGGAAGCCTCGCCGAGGAGAGCATCGCGCT
CCAGCCGCTTTCCCGTGTGGACGAACTGCCCGAGCGGACATGGGCTGCCGACTGGATCGTAACGATCCTGACCCGCGAAG
GCCTCTCGGTTACGCCGGAGGTGAAGGAGCATGTCTGGTCAGCGCTCACCTCGCTGGCCTCGGCCCCGGTAGACGAGCGC
ACCCTGACCGGTCTCGCTGTCCTCCTCCAGTCTAATGCCCTCAAGCAGGCCCTGCGGCCCTATTGCATCGGTGGCGCCCA
TGGCCAGCTGCTCGACGCCGAGGCCGAGCATCTGGGGCAGGCGTCCGTCCAGGCCTTTGAGACCGAGGGGCTGATCGGCA
CTAGCGCCGCGCCGGCGGTGTTGTCCTATCTGTTCCACCGCATCGAGGACCGGCTCGACGGATCGCCGACCCTCCTCATC
ATCGACGAGGGATGGCTCGCCCTTGATGACCCGGGCTTCGCCGGACAGCTCCGGGAATGGCTCAAGACCCTGCGTAAGAA
GAACGCCAGCGTGGTGTTCGCCACCCAGTCCCTCTCGGACATCGACGGCTCCGCCATCGCCCCCGCCATCATCGAGAGCT
GCCAGACGCGGCTACTGCTCCCCAACGAGCGGGCCATCGAGCCCCAGATCACCGCTATCTACCGGCGCTTCGGCCTCAAC
GACCGGAAGATCGAGATCCTCGCACGGGCCACCCCGAAGCGGGACTATTACTGCCAGTCCCGACGCGGCAACCGCCTGTT
CGAGCTCGGGCTCTCGCAGGTGGCGCTCGCCTTGTGCGCCGCCGGGTCCAAGACCGATCAGGCTGCGCTCTCGCAGATCC
TCGCCGAGCATGGGCGCGACGGCTTCTTCGCCCCCTGGCTGCGGCATCGCGGCCTCGGCTGGGCCGCCGATCTCATCCTC
ACCCTCGACAATCTGGAGCCACGCTCATGA

Upstream 100 bases:

>100_bases
CACCGCCGTCTGGGCGGCCAAGCGCGATCCGCTCTTCGTCGACGTGGTGCGTCGGCATCTGCGCATCTCCTCCCACCTAT
CGGTCTGAGGGGCGCGCAAT

Downstream 100 bases:

>100_bases
TCCGCCGTTCATTGCGGGCGGTGCTCGTCGCCGCGCCGCTTCTTTTCTGCCCGTTCGCGCCGGCCGTGGCGCAGTACGTG
GTCTACGACCCCTCCAACTA

Product: conjugal transfer ATPase TrbE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 809; Mature: 809

Protein sequence:

>809_residues
MMNLAEYRRHGSRLADYLPWAALVGPGLVLNKDGSFQRTACFRGPDLESAVPAELVAVAGRLNSTFRRLGSGWALFVEAQ
RHEAGAYPESLFPDPASALVDAERKAGFAEAGSHFESSYFLTFCWLPPAEDAARAESWLYEGRGREGVDPHEALDGFADR
TDRVLRLVESFMPECHWLDDAETLTYLHGCVSIRRQRVRVPETPMYLDALLADQPLTGGLEPMLGDQHLRVLTIVGFPTA
TTPGILDDLNRLAFPYRWSTRAILLDKTDATRLLTKIRRQWFAKRKSIAAILKEVMTNEASVLVDSDADNKAEDADLALQ
ELGADHAGIAYITAMVTVWDADPRVADEKLRLVEKVIQGRDFTAMAETINAVDAWLGSLPGHVYANVRQPPVSTLNLAHM
IPLSAVWAGDAQDAHFAAPPLFYGKTEGSTPFRFTLHVGDVGHTLVVGPTGAGKSVLLALMALQFRRYAGSQVFAFDFGG
SIRAAALAMGGDWHDLGGSLAEESIALQPLSRVDELPERTWAADWIVTILTREGLSVTPEVKEHVWSALTSLASAPVDER
TLTGLAVLLQSNALKQALRPYCIGGAHGQLLDAEAEHLGQASVQAFETEGLIGTSAAPAVLSYLFHRIEDRLDGSPTLLI
IDEGWLALDDPGFAGQLREWLKTLRKKNASVVFATQSLSDIDGSAIAPAIIESCQTRLLLPNERAIEPQITAIYRRFGLN
DRKIEILARATPKRDYYCQSRRGNRLFELGLSQVALALCAAGSKTDQAALSQILAEHGRDGFFAPWLRHRGLGWAADLIL
TLDNLEPRS

Sequences:

>Translated_809_residues
MMNLAEYRRHGSRLADYLPWAALVGPGLVLNKDGSFQRTACFRGPDLESAVPAELVAVAGRLNSTFRRLGSGWALFVEAQ
RHEAGAYPESLFPDPASALVDAERKAGFAEAGSHFESSYFLTFCWLPPAEDAARAESWLYEGRGREGVDPHEALDGFADR
TDRVLRLVESFMPECHWLDDAETLTYLHGCVSIRRQRVRVPETPMYLDALLADQPLTGGLEPMLGDQHLRVLTIVGFPTA
TTPGILDDLNRLAFPYRWSTRAILLDKTDATRLLTKIRRQWFAKRKSIAAILKEVMTNEASVLVDSDADNKAEDADLALQ
ELGADHAGIAYITAMVTVWDADPRVADEKLRLVEKVIQGRDFTAMAETINAVDAWLGSLPGHVYANVRQPPVSTLNLAHM
IPLSAVWAGDAQDAHFAAPPLFYGKTEGSTPFRFTLHVGDVGHTLVVGPTGAGKSVLLALMALQFRRYAGSQVFAFDFGG
SIRAAALAMGGDWHDLGGSLAEESIALQPLSRVDELPERTWAADWIVTILTREGLSVTPEVKEHVWSALTSLASAPVDER
TLTGLAVLLQSNALKQALRPYCIGGAHGQLLDAEAEHLGQASVQAFETEGLIGTSAAPAVLSYLFHRIEDRLDGSPTLLI
IDEGWLALDDPGFAGQLREWLKTLRKKNASVVFATQSLSDIDGSAIAPAIIESCQTRLLLPNERAIEPQITAIYRRFGLN
DRKIEILARATPKRDYYCQSRRGNRLFELGLSQVALALCAAGSKTDQAALSQILAEHGRDGFFAPWLRHRGLGWAADLIL
TLDNLEPRS
>Mature_809_residues
MMNLAEYRRHGSRLADYLPWAALVGPGLVLNKDGSFQRTACFRGPDLESAVPAELVAVAGRLNSTFRRLGSGWALFVEAQ
RHEAGAYPESLFPDPASALVDAERKAGFAEAGSHFESSYFLTFCWLPPAEDAARAESWLYEGRGREGVDPHEALDGFADR
TDRVLRLVESFMPECHWLDDAETLTYLHGCVSIRRQRVRVPETPMYLDALLADQPLTGGLEPMLGDQHLRVLTIVGFPTA
TTPGILDDLNRLAFPYRWSTRAILLDKTDATRLLTKIRRQWFAKRKSIAAILKEVMTNEASVLVDSDADNKAEDADLALQ
ELGADHAGIAYITAMVTVWDADPRVADEKLRLVEKVIQGRDFTAMAETINAVDAWLGSLPGHVYANVRQPPVSTLNLAHM
IPLSAVWAGDAQDAHFAAPPLFYGKTEGSTPFRFTLHVGDVGHTLVVGPTGAGKSVLLALMALQFRRYAGSQVFAFDFGG
SIRAAALAMGGDWHDLGGSLAEESIALQPLSRVDELPERTWAADWIVTILTREGLSVTPEVKEHVWSALTSLASAPVDER
TLTGLAVLLQSNALKQALRPYCIGGAHGQLLDAEAEHLGQASVQAFETEGLIGTSAAPAVLSYLFHRIEDRLDGSPTLLI
IDEGWLALDDPGFAGQLREWLKTLRKKNASVVFATQSLSDIDGSAIAPAIIESCQTRLLLPNERAIEPQITAIYRRFGLN
DRKIEILARATPKRDYYCQSRRGNRLFELGLSQVALALCAAGSKTDQAALSQILAEHGRDGFFAPWLRHRGLGWAADLIL
TLDNLEPRS

Specific function: Unknown

COG id: COG3451

COG function: function code U; Type IV secretory pathway, VirB4 components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trbE/virB4 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR004346
- InterPro:   IPR018145 [H]

Pfam domain/function: PF03135 CagE_TrbE_VirB [H]

EC number: NA

Molecular weight: Translated: 88537; Mature: 88537

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNLAEYRRHGSRLADYLPWAALVGPGLVLNKDGSFQRTACFRGPDLESAVPAELVAVAG
CCCHHHHHHHHHHHHHHCCHHHHHCCCEEEECCCCCCCCEECCCCCCCCCCHHHHHHHHH
RLNSTFRRLGSGWALFVEAQRHEAGAYPESLFPDPASALVDAERKAGFAEAGSHFESSYF
HHHHHHHHHCCCEEEEEEEECCCCCCCCHHCCCCHHHHHHHHHHHCCHHHHCCCCCCCEE
LTFCWLPPAEDAARAESWLYEGRGREGVDPHEALDGFADRTDRVLRLVESFMPECHWLDD
EEEEECCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
AETLTYLHGCVSIRRQRVRVPETPMYLDALLADQPLTGGLEPMLGDQHLRVLTIVGFPTA
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEECCCC
TTPGILDDLNRLAFPYRWSTRAILLDKTDATRLLTKIRRQWFAKRKSIAAILKEVMTNEA
CCCHHHHHHHHHCCCEEECCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SVLVDSDADNKAEDADLALQELGADHAGIAYITAMVTVWDADPRVADEKLRLVEKVIQGR
EEEEECCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHEECCCCCHHHHHHHHHHHHHCCC
DFTAMAETINAVDAWLGSLPGHVYANVRQPPVSTLNLAHMIPLSAVWAGDAQDAHFAAPP
CHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHCCHHHEECCCCCCCCCCCCC
LFYGKTEGSTPFRFTLHVGDVGHTLVVGPTGAGKSVLLALMALQFRRYAGSQVFAFDFGG
CEECCCCCCCCEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEECCC
SIRAAALAMGGDWHDLGGSLAEESIALQPLSRVDELPERTWAADWIVTILTREGLSVTPE
CHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
VKEHVWSALTSLASAPVDERTLTGLAVLLQSNALKQALRPYCIGGAHGQLLDAEAEHLGQ
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCEECHHHHHCCH
ASVQAFETEGLIGTSAAPAVLSYLFHRIEDRLDGSPTLLIIDEGWLALDDPGFAGQLREW
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEECCCCCHHHHHHH
LKTLRKKNASVVFATQSLSDIDGSAIAPAIIESCQTRLLLPNERAIEPQITAIYRRFGLN
HHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCEEECCCCCCCCHHHHHHHHHHCCC
DRKIEILARATPKRDYYCQSRRGNRLFELGLSQVALALCAAGSKTDQAALSQILAEHGRD
CCEEEEEEECCCCCCCEECCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC
GFFAPWLRHRGLGWAADLILTLDNLEPRS
CCCCHHHHHCCCCHHHHHHEEECCCCCCC
>Mature Secondary Structure
MMNLAEYRRHGSRLADYLPWAALVGPGLVLNKDGSFQRTACFRGPDLESAVPAELVAVAG
CCCHHHHHHHHHHHHHHCCHHHHHCCCEEEECCCCCCCCEECCCCCCCCCCHHHHHHHHH
RLNSTFRRLGSGWALFVEAQRHEAGAYPESLFPDPASALVDAERKAGFAEAGSHFESSYF
HHHHHHHHHCCCEEEEEEEECCCCCCCCHHCCCCHHHHHHHHHHHCCHHHHCCCCCCCEE
LTFCWLPPAEDAARAESWLYEGRGREGVDPHEALDGFADRTDRVLRLVESFMPECHWLDD
EEEEECCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
AETLTYLHGCVSIRRQRVRVPETPMYLDALLADQPLTGGLEPMLGDQHLRVLTIVGFPTA
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEECCCC
TTPGILDDLNRLAFPYRWSTRAILLDKTDATRLLTKIRRQWFAKRKSIAAILKEVMTNEA
CCCHHHHHHHHHCCCEEECCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SVLVDSDADNKAEDADLALQELGADHAGIAYITAMVTVWDADPRVADEKLRLVEKVIQGR
EEEEECCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHEECCCCCHHHHHHHHHHHHHCCC
DFTAMAETINAVDAWLGSLPGHVYANVRQPPVSTLNLAHMIPLSAVWAGDAQDAHFAAPP
CHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHCCHHHEECCCCCCCCCCCCC
LFYGKTEGSTPFRFTLHVGDVGHTLVVGPTGAGKSVLLALMALQFRRYAGSQVFAFDFGG
CEECCCCCCCCEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEECCC
SIRAAALAMGGDWHDLGGSLAEESIALQPLSRVDELPERTWAADWIVTILTREGLSVTPE
CHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
VKEHVWSALTSLASAPVDERTLTGLAVLLQSNALKQALRPYCIGGAHGQLLDAEAEHLGQ
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCEECHHHHHCCH
ASVQAFETEGLIGTSAAPAVLSYLFHRIEDRLDGSPTLLIIDEGWLALDDPGFAGQLREW
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEECCCCCHHHHHHH
LKTLRKKNASVVFATQSLSDIDGSAIAPAIIESCQTRLLLPNERAIEPQITAIYRRFGLN
HHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCEEECCCCCCCCHHHHHHHHHHCCC
DRKIEILARATPKRDYYCQSRRGNRLFELGLSQVALALCAAGSKTDQAALSQILAEHGRD
CCEEEEEEECCCCCCCEECCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC
GFFAPWLRHRGLGWAADLILTLDNLEPRS
CCCCHHHHHCCCCHHHHHHEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8763954 [H]