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The map label for this gene is yubM [H]

Identifier: 154244505

GI number: 154244505

Start: 620312

End: 622159

Strand: Direct

Name: yubM [H]

Synonym: Xaut_0550

Alternate gene names: 154244505

Gene position: 620312-622159 (Clockwise)

Preceding gene: 154244504

Following gene: 154244508

Centisome position: 11.68

GC content: 65.26

Gene sequence:

>1848_bases
ATGACCGAGACGCACAATATCCCTCTGAACAAGCTGATCCAGTGGGACGGCAATGTCCGTCGTACAGGCGCCGATGACGG
CATCGAAGAACTTGCCGCCTCCATAGGGGCGCACGGCCTGTTGCAGGCGCTGATCGTCCGCAAGGCGAAGGGCGGCCAAT
TCGCCGTTGTCGCCGGGCAACGGCGCCTGAAGGCGCTGAAGCTGCTGGCCTCACGGAAGACGTTGACCGCATCCGCACCC
ATCCGGTGCGAACTCGTATCGGAAGAGACCGATGCCGGGGAATTGTCCCTCGCGGAAAACGTCATGCGCGTCGCCATGCA
TCCGGCAGATCAGTTTGAGGCCTTCCGGGACCTGGTCGATCGCGGACTCGATATCGCGGCAGTGGCGCGGCGCTTCGGTA
TAAGCGAGACTTTGGTCGTGAAACGGCTGAAGCTGGGCCGGCTGAGCCCTGTCATTCTCGATGCCTATCGCAACGGCGAC
ATTGACCTCGAAGAGACTCAGGCATTTGCGATCACAGACGACCATGCGGCCCAAGAGCGGGTTCTGGCCGATTTGCCGGA
ATGGAACCGTTCGGCAGCGCTCATCCGCCGCCATCTGACTGAAGATGAAATTTCCGCTACCGACAAGCGGGTGTGCTTCA
TCGGCCTCGATGCCTACGAGCAGGCGGGCGGCGCGGTGCGGCGCGACCTGTTCGACGACGCGCACAGCGGAACTATCCTT
GATCCGGCATTGCTGGACCGGCTGGTTGACGCGAAGCTGACCGCCTTTGCGGAAGGTGTGCGCGCGGAAGGCTGGGCTTG
GGTCGATCTGGCCGGCATGCTGGATCGTTCGGTCATGGCCGGCTACCGCCGCGTTTGCCCGGAACAGGTGCCTCTCACCG
ACGCGCAACAGGCCGAACTTGAAGCGTTGTCCGCAGAGTATGACACGCTTGCTGACTCGCCGGGGGCCGACGCTGGCGAG
GAGGCGGTTCTGGCGCGGCTAGATTTCATCCAGCACCGTCTGGACGAGCTTGACGCCGCACAAGAGCGCTGGAGCGCCGA
AACGCTGTCATCCGCCGGAGCCATAGTCGGCATCGGCTGGGACGGGGCCGCTGTGATCGAGCGTGGGCTCGCCCGGCGCG
ACGCGGTGCCGGACATCGACATCGGTGACGACGAGAAACCTGTCCGGACTGCGGCGGGGATTTCAGCGACGCTCGTCACC
GAGTTGACGGCCCGGAAGACCGTGGCGTTGCGGAAGGTGGCCGCTGACAACGTGCCGGTCATGCTGGCGGCCGTGGTCCA
TGCGCTGGCCCTGCCGTGCTTCTATAGCGGCGCGCAGAGCCGGTCCTGCCTGCAACTCTCGCTCCGGGAAGCATGCCCGG
AGCGGCATTTGCGCGACCAGGAACCGATGGAGACCGCGCAGGCCTTCGGTACAGCAGAAGCGCGCTGGACGGCGCTTCTG
CCCGAAGACCCTTCCGCCCTCTGGACGTGGTGCCTGGCGCAGCCGCAGGACACATTGCTGGCGCTGCTAGCCCATATCGG
CGCGCGTGCCATCGACGCCGTGCGTCTCAAGGCCGACCGGCCCGAAGCCGGGCGGTTCGTTCATGCGGAACAGCTCGCTC
AAACGGTTGGTTTCGACATGGCGGCGCACTTCACGCCCGATTGTGACAGCTATTTCGGGCGCGTTACCGGCACGCAGATC
ATCGCGGCGCTGTGCGAGGCAAAGGGCGTATCGCCCGCCCCCGCATGGACGCGAATGAAGAAATCGGACCTTGCGACCTT
CGCGGCCCGCGAGCTTGCCGGCACCGGCTGGTTGCCGGCGGTCCTGCGCTGTCAAGACGAGGTCGAACCTCTCGCGGACG
CCGCCTGA

Upstream 100 bases:

>100_bases
GGCCGTGTTGACCGTAGCCGCGTGCCGCGGTGACCGCGCGTCTCTCCGCCCGTCCTTTCTCCCTGGCGTCTTGAGCCAAC
CGACAACAAAGGAGAAAGTC

Downstream 100 bases:

>100_bases
GCGGCCGTCTTCGCCGGCCGCGTTCGCAAGGGCGCGGCCGGTTTTCCTTGCTGACCCGGCATGCGGCTTTTGCGAATGGA
TCAACCCGATGCGCCAGCGC

Product: parB-like partition protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 615; Mature: 614

Protein sequence:

>615_residues
MTETHNIPLNKLIQWDGNVRRTGADDGIEELAASIGAHGLLQALIVRKAKGGQFAVVAGQRRLKALKLLASRKTLTASAP
IRCELVSEETDAGELSLAENVMRVAMHPADQFEAFRDLVDRGLDIAAVARRFGISETLVVKRLKLGRLSPVILDAYRNGD
IDLEETQAFAITDDHAAQERVLADLPEWNRSAALIRRHLTEDEISATDKRVCFIGLDAYEQAGGAVRRDLFDDAHSGTIL
DPALLDRLVDAKLTAFAEGVRAEGWAWVDLAGMLDRSVMAGYRRVCPEQVPLTDAQQAELEALSAEYDTLADSPGADAGE
EAVLARLDFIQHRLDELDAAQERWSAETLSSAGAIVGIGWDGAAVIERGLARRDAVPDIDIGDDEKPVRTAAGISATLVT
ELTARKTVALRKVAADNVPVMLAAVVHALALPCFYSGAQSRSCLQLSLREACPERHLRDQEPMETAQAFGTAEARWTALL
PEDPSALWTWCLAQPQDTLLALLAHIGARAIDAVRLKADRPEAGRFVHAEQLAQTVGFDMAAHFTPDCDSYFGRVTGTQI
IAALCEAKGVSPAPAWTRMKKSDLATFAARELAGTGWLPAVLRCQDEVEPLADAA

Sequences:

>Translated_615_residues
MTETHNIPLNKLIQWDGNVRRTGADDGIEELAASIGAHGLLQALIVRKAKGGQFAVVAGQRRLKALKLLASRKTLTASAP
IRCELVSEETDAGELSLAENVMRVAMHPADQFEAFRDLVDRGLDIAAVARRFGISETLVVKRLKLGRLSPVILDAYRNGD
IDLEETQAFAITDDHAAQERVLADLPEWNRSAALIRRHLTEDEISATDKRVCFIGLDAYEQAGGAVRRDLFDDAHSGTIL
DPALLDRLVDAKLTAFAEGVRAEGWAWVDLAGMLDRSVMAGYRRVCPEQVPLTDAQQAELEALSAEYDTLADSPGADAGE
EAVLARLDFIQHRLDELDAAQERWSAETLSSAGAIVGIGWDGAAVIERGLARRDAVPDIDIGDDEKPVRTAAGISATLVT
ELTARKTVALRKVAADNVPVMLAAVVHALALPCFYSGAQSRSCLQLSLREACPERHLRDQEPMETAQAFGTAEARWTALL
PEDPSALWTWCLAQPQDTLLALLAHIGARAIDAVRLKADRPEAGRFVHAEQLAQTVGFDMAAHFTPDCDSYFGRVTGTQI
IAALCEAKGVSPAPAWTRMKKSDLATFAARELAGTGWLPAVLRCQDEVEPLADAA
>Mature_614_residues
TETHNIPLNKLIQWDGNVRRTGADDGIEELAASIGAHGLLQALIVRKAKGGQFAVVAGQRRLKALKLLASRKTLTASAPI
RCELVSEETDAGELSLAENVMRVAMHPADQFEAFRDLVDRGLDIAAVARRFGISETLVVKRLKLGRLSPVILDAYRNGDI
DLEETQAFAITDDHAAQERVLADLPEWNRSAALIRRHLTEDEISATDKRVCFIGLDAYEQAGGAVRRDLFDDAHSGTILD
PALLDRLVDAKLTAFAEGVRAEGWAWVDLAGMLDRSVMAGYRRVCPEQVPLTDAQQAELEALSAEYDTLADSPGADAGEE
AVLARLDFIQHRLDELDAAQERWSAETLSSAGAIVGIGWDGAAVIERGLARRDAVPDIDIGDDEKPVRTAAGISATLVTE
LTARKTVALRKVAADNVPVMLAAVVHALALPCFYSGAQSRSCLQLSLREACPERHLRDQEPMETAQAFGTAEARWTALLP
EDPSALWTWCLAQPQDTLLALLAHIGARAIDAVRLKADRPEAGRFVHAEQLAQTVGFDMAAHFTPDCDSYFGRVTGTQII
AALCEAKGVSPAPAWTRMKKSDLATFAARELAGTGWLPAVLRCQDEVEPLADAA

Specific function: Unknown

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004437
- InterPro:   IPR003115 [H]

Pfam domain/function: PF02195 ParBc [H]

EC number: NA

Molecular weight: Translated: 66532; Mature: 66401

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTETHNIPLNKLIQWDGNVRRTGADDGIEELAASIGAHGLLQALIVRKAKGGQFAVVAGQ
CCCCCCCCHHHHHCCCCCEECCCCCCCHHHHHHHHCHHHHHHHHHHHHCCCCCEEEEECH
RRLKALKLLASRKTLTASAPIRCELVSEETDAGELSLAENVMRVAMHPADQFEAFRDLVD
HHHHHHHHHHHCCCEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHH
RGLDIAAVARRFGISETLVVKRLKLGRLSPVILDAYRNGDIDLEETQAFAITDDHAAQER
CCCCHHHHHHHHCCHHHHHHHHHHHCCCCHHHEEHHCCCCCCHHHCCEEEEECCHHHHHH
VLADLPEWNRSAALIRRHLTEDEISATDKRVCFIGLDAYEQAGGAVRRDLFDDAHSGTIL
HHHCCCCCCHHHHHHHHHCCHHHHCCCCCEEEEEECHHHHHHCCHHHHHHHHCCCCCCEE
DPALLDRLVDAKLTAFAEGVRAEGWAWVDLAGMLDRSVMAGYRRVCPEQVPLTDAQQAEL
CHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
EALSAEYDTLADSPGADAGEEAVLARLDFIQHRLDELDAAQERWSAETLSSAGAIVGIGW
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECC
DGAAVIERGLARRDAVPDIDIGDDEKPVRTAAGISATLVTELTARKTVALRKVAADNVPV
CCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHH
MLAAVVHALALPCFYSGAQSRSCLQLSLREACPERHLRDQEPMETAQAFGTAEARWTALL
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHCCCCCHHHHHHHHCCCCCEEEEEC
PEDPSALWTWCLAQPQDTLLALLAHIGARAIDAVRLKADRPEAGRFVHAEQLAQTVGFDM
CCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCCEECHHHHHHHHCCCH
AAHFTPDCDSYFGRVTGTQIIAALCEAKGVSPAPAWTRMKKSDLATFAARELAGTGWLPA
HCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHH
VLRCQDEVEPLADAA
HHHHHHHHHHHHCCC
>Mature Secondary Structure 
TETHNIPLNKLIQWDGNVRRTGADDGIEELAASIGAHGLLQALIVRKAKGGQFAVVAGQ
CCCCCCCHHHHHCCCCCEECCCCCCCHHHHHHHHCHHHHHHHHHHHHCCCCCEEEEECH
RRLKALKLLASRKTLTASAPIRCELVSEETDAGELSLAENVMRVAMHPADQFEAFRDLVD
HHHHHHHHHHHCCCEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHH
RGLDIAAVARRFGISETLVVKRLKLGRLSPVILDAYRNGDIDLEETQAFAITDDHAAQER
CCCCHHHHHHHHCCHHHHHHHHHHHCCCCHHHEEHHCCCCCCHHHCCEEEEECCHHHHHH
VLADLPEWNRSAALIRRHLTEDEISATDKRVCFIGLDAYEQAGGAVRRDLFDDAHSGTIL
HHHCCCCCCHHHHHHHHHCCHHHHCCCCCEEEEEECHHHHHHCCHHHHHHHHCCCCCCEE
DPALLDRLVDAKLTAFAEGVRAEGWAWVDLAGMLDRSVMAGYRRVCPEQVPLTDAQQAEL
CHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
EALSAEYDTLADSPGADAGEEAVLARLDFIQHRLDELDAAQERWSAETLSSAGAIVGIGW
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECC
DGAAVIERGLARRDAVPDIDIGDDEKPVRTAAGISATLVTELTARKTVALRKVAADNVPV
CCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHH
MLAAVVHALALPCFYSGAQSRSCLQLSLREACPERHLRDQEPMETAQAFGTAEARWTALL
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHCCCCCHHHHHHHHCCCCCEEEEEC
PEDPSALWTWCLAQPQDTLLALLAHIGARAIDAVRLKADRPEAGRFVHAEQLAQTVGFDM
CCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCCEECHHHHHHHHCCCH
AAHFTPDCDSYFGRVTGTQIIAALCEAKGVSPAPAWTRMKKSDLATFAARELAGTGWLPA
HCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHH
VLRCQDEVEPLADAA
HHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9722640; 9628576 [H]