Definition Xanthobacter autotrophicus Py2 chromosome, complete genome.
Accession NC_009720
Length 5,308,934

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The map label for this gene is 154244504

Identifier: 154244504

GI number: 154244504

Start: 617432

End: 620104

Strand: Direct

Name: 154244504

Synonym: Xaut_0549

Alternate gene names: NA

Gene position: 617432-620104 (Clockwise)

Preceding gene: 154244503

Following gene: 154244505

Centisome position: 11.63

GC content: 60.19

Gene sequence:

>2673_bases
GTGGCGCTGCATCCTGATTTTCCGACGGACCCCTATGCGGTGCTGCTCCCGGATGTACGCTGGTATCCCGGCGACGAAAT
GCTTGGCGGCATGGGCTATGAAATGTTGCTGCCGCCCCTCGTGTATAAGGTCCGCAAGGCCGTGGCGGCATGGCGAGCGT
CCGGCTACGAGGGGGCTTCCCCGACCACGGCGGCGTTGCTCAATCACTGGTTCCGCGACGAGCATATGATGCCGCAGGCC
GACGGGACCGTGCGGCCGTTTCAATGGTACTTCGCGCAGCGCGAGGCGGTGGAATCGGCCATCTGGCTTTACGAAATCGA
GCGGGCGCGCGACCCGTATGCGCTAATGAAATTCGATTCCTCCGGGCGGGTGTCCAAGGGCATGTTCGCCGAGGACTGGA
CCCGTTATGTGCTGAAACTCGCGACCGGCGCGGGGAAGACCAAGGTCATGAGTCTTCTCATGACGTGGTGTTATTTCCAC
AAGCTCTATGAGCCGGATTCCGATCTTTCGACGAATTTCCTGCTGATCGCGCCCAACATCATCGTGCTTGATCGGCTGCG
TACCGATTTCGACGGCGCCCGGATTTTCTACGAAGACCCGCTGCTCCCGGACAACGGTTATGAGGGGCAGAACTGGCAGG
ACGATTTCCAGATGACCGTCCACATCCAGGACGAAATCGGGTTGGTCGCACCGCAGGGCAACCTGTTCCTGACCAATATT
CATCGCGTCTATGAATCCGGGTCCGCCCCGGCCTTCGAGGATCAGAATGCGACGGACTATTTCCTCGGAAAAAAGCCGGT
CGGCAAGGCGACGGACAGCCAGGTCGATCTCGGCATGATCGTGCGCGAGGTGCCCGATCTCGTCGTTCTGAACGACGAAG
CGCACCACCTGCATGACGCGCAGAGCGCGTGGTTCAAATCCATCGAGGACATATCGTTGCGCCTGCGCCAGAAGGGGACG
CAGCTCTCGGCGCAATTCGACCTCTCCGCCACGCCCAAGCACAATAACGGCGCGATCTTCGTGCAGACGGTCAGCGATTA
TCCGCTGGTCGAGGCGATCCGTCAGGGCGTGGTCAAGACACCGGTGCTGCCGGACGGGCCGTCGCGCGCCAAGCTCCAGG
AAAAAAAGAGCGCACAGTTTACCGAGCAATATGAAGACTATCTTCATCTCGGCTATCTCGAATGGAAGAAGGTCTATGAC
GAGCTTCTCCCGACAGGGAAGAAGTCCGTGCTGTTCGTCATGACCGACGACACGCGCAATTGCGACGAAGTGGCCGAATA
TCTGGAAAGCCGCTACCCCGAGCTGAAAGGCGGCGTGCTGGTTATCCATACCAAGCGCAACGGCGAGATTTCCGAAGCGT
CCTCCGGCAAGAGCAAGGAGGAACTGGACAAGCTGCGCGAAGCCAGCAAATCCATCGACGATCCTGCCAGCCCCTACAAA
GCCATCGTCTCCGTCATGGTGCTGCGCGAAGGCTGGGATGTGCAGAACGTCGTCTCGATCGTCGGCCTGCGGCCCTACAC
CAGCGCGGCGCGCATCCTGCCGGAACAGACCCTTGGCCGCGGGCTGCGGCGCATGTTCCGCGGCGAAGACGTGCAGGAAA
AGGTCAGCGTCATCGGCACGGACGCCTTCATGGACTTTGTCGAAGGGATCAAGGTCGAGGGCGTCGAACTCGAATACCAG
CCGATGGGCGAGCGAACCGGCCCCAAATCGCCGGTCGTCATCGAGGTCGATCAGGACAACAAGGCCAAGGATATCGACAA
GCTCGACATCGACCTGCCGCTCCTCGCGCCCCGTATCCAGCGCGAGTACAAGAATCTCGCCGATCTTGATGTGGCCGCGC
TGGGCCACAAGCGCGTCGCCTATCGCCTGTTCACGGAGGAAGAGCAGCGCGAGATCGTCTTCCGCGACATGAACACCGAC
CAGCAAAGCCACGTCACGGCGATGGACACGGCCTTCACGCCCAACTACCAGAACATGATCGGGTTCTTTGCGCGCTCCAT
TATGCGCGACCTGCGGCTTGTCGGCGGATTCGATGTCCTCTTCGGCAAGATCAAGGCGTTCGTGGAGTCATATCTCTTCG
ATCGTGCCGTGGACCTGGATGACCTCAACACGCTGCGAAATCTGTCCGAGATCGAGGCCACGCGCACACTGGTCGAAACC
ATAAAAGGTGCCGTCAACGCGCTCACGGTGCAGGATACCGGCACGACCGAGGTGCGCGGCTCCATCCGGCTGGCCAAAAC
CCGGCCGTTCCTCGTGAAGGAGCAGCCTTTCCTCGTACCGAAGAAATCGATCTTCAACAAGGTCGTCGGCGACTCGCATT
TCGAGCTGGAATTCGCGGCGTTTCTTGACGGCTGCCCCGACATCGTCTCGTTTGTGAAGAACAGCCAGAGTACGTCCTTC
CGCATTGAATACCAGAACGCCGACGGCAGTATCGCCAACTACATCCCCGACTTCATCGTAAAGCAGACCGACAGCGATGT
CTGGATCGTCGAAACCAAAGGCCGCGAAGACCTCGACGATCCGCTCAAGTGGGACCGTCTTCAGCAGTGGTGCGCCGATG
CCACCGCGCACGACGAAGCCGGGCGTACCTTCAGCCCTCTGTTCGTCCGGCAAGAGGACTGGGAGCAGTACAAGCCGGCC
CGTTTCCACGATGCGATCGCCGCTCATCGGTAA

Upstream 100 bases:

>100_bases
GACGCGATCATTGCGCGGGGCCGGAACCTGTTCGCGCTGGCAAGAGCAATATGGACGTTGCCCGCGGTGAACGCGGCGGA
AGCCTGACGGGGGGAACGAC

Downstream 100 bases:

>100_bases
AGTCCGCCGGTTCCTGTTCCTTTCCGTCGTCGGCTCAATCCATGACGCCATTGCGGCCGGGCGCGCCGCCCGGTCAACGG
CCTGCCCGCGCCACCCCGGC

Product: type III restriction protein res subunit

Products: NA

Alternate protein names: Type III Restriction Res Subunit; Type III Restriction- Helicase Subunit; Type III Restriction; DNA Restriction- System Restriction; Type III Restriction- System Res Subunit; PstII Restriction- Res Subunit; Type III Restriction Res Subunit Family; Type III Restriction- System; Type III Restriction-; Type III Restriction- System Restriction Subunit; Type III Restriction- R/Helicase Subunit; Type III Restriction- System R Subunit

Number of amino acids: Translated: 890; Mature: 889

Protein sequence:

>890_residues
MALHPDFPTDPYAVLLPDVRWYPGDEMLGGMGYEMLLPPLVYKVRKAVAAWRASGYEGASPTTAALLNHWFRDEHMMPQA
DGTVRPFQWYFAQREAVESAIWLYEIERARDPYALMKFDSSGRVSKGMFAEDWTRYVLKLATGAGKTKVMSLLMTWCYFH
KLYEPDSDLSTNFLLIAPNIIVLDRLRTDFDGARIFYEDPLLPDNGYEGQNWQDDFQMTVHIQDEIGLVAPQGNLFLTNI
HRVYESGSAPAFEDQNATDYFLGKKPVGKATDSQVDLGMIVREVPDLVVLNDEAHHLHDAQSAWFKSIEDISLRLRQKGT
QLSAQFDLSATPKHNNGAIFVQTVSDYPLVEAIRQGVVKTPVLPDGPSRAKLQEKKSAQFTEQYEDYLHLGYLEWKKVYD
ELLPTGKKSVLFVMTDDTRNCDEVAEYLESRYPELKGGVLVIHTKRNGEISEASSGKSKEELDKLREASKSIDDPASPYK
AIVSVMVLREGWDVQNVVSIVGLRPYTSAARILPEQTLGRGLRRMFRGEDVQEKVSVIGTDAFMDFVEGIKVEGVELEYQ
PMGERTGPKSPVVIEVDQDNKAKDIDKLDIDLPLLAPRIQREYKNLADLDVAALGHKRVAYRLFTEEEQREIVFRDMNTD
QQSHVTAMDTAFTPNYQNMIGFFARSIMRDLRLVGGFDVLFGKIKAFVESYLFDRAVDLDDLNTLRNLSEIEATRTLVET
IKGAVNALTVQDTGTTEVRGSIRLAKTRPFLVKEQPFLVPKKSIFNKVVGDSHFELEFAAFLDGCPDIVSFVKNSQSTSF
RIEYQNADGSIANYIPDFIVKQTDSDVWIVETKGREDLDDPLKWDRLQQWCADATAHDEAGRTFSPLFVRQEDWEQYKPA
RFHDAIAAHR

Sequences:

>Translated_890_residues
MALHPDFPTDPYAVLLPDVRWYPGDEMLGGMGYEMLLPPLVYKVRKAVAAWRASGYEGASPTTAALLNHWFRDEHMMPQA
DGTVRPFQWYFAQREAVESAIWLYEIERARDPYALMKFDSSGRVSKGMFAEDWTRYVLKLATGAGKTKVMSLLMTWCYFH
KLYEPDSDLSTNFLLIAPNIIVLDRLRTDFDGARIFYEDPLLPDNGYEGQNWQDDFQMTVHIQDEIGLVAPQGNLFLTNI
HRVYESGSAPAFEDQNATDYFLGKKPVGKATDSQVDLGMIVREVPDLVVLNDEAHHLHDAQSAWFKSIEDISLRLRQKGT
QLSAQFDLSATPKHNNGAIFVQTVSDYPLVEAIRQGVVKTPVLPDGPSRAKLQEKKSAQFTEQYEDYLHLGYLEWKKVYD
ELLPTGKKSVLFVMTDDTRNCDEVAEYLESRYPELKGGVLVIHTKRNGEISEASSGKSKEELDKLREASKSIDDPASPYK
AIVSVMVLREGWDVQNVVSIVGLRPYTSAARILPEQTLGRGLRRMFRGEDVQEKVSVIGTDAFMDFVEGIKVEGVELEYQ
PMGERTGPKSPVVIEVDQDNKAKDIDKLDIDLPLLAPRIQREYKNLADLDVAALGHKRVAYRLFTEEEQREIVFRDMNTD
QQSHVTAMDTAFTPNYQNMIGFFARSIMRDLRLVGGFDVLFGKIKAFVESYLFDRAVDLDDLNTLRNLSEIEATRTLVET
IKGAVNALTVQDTGTTEVRGSIRLAKTRPFLVKEQPFLVPKKSIFNKVVGDSHFELEFAAFLDGCPDIVSFVKNSQSTSF
RIEYQNADGSIANYIPDFIVKQTDSDVWIVETKGREDLDDPLKWDRLQQWCADATAHDEAGRTFSPLFVRQEDWEQYKPA
RFHDAIAAHR
>Mature_889_residues
ALHPDFPTDPYAVLLPDVRWYPGDEMLGGMGYEMLLPPLVYKVRKAVAAWRASGYEGASPTTAALLNHWFRDEHMMPQAD
GTVRPFQWYFAQREAVESAIWLYEIERARDPYALMKFDSSGRVSKGMFAEDWTRYVLKLATGAGKTKVMSLLMTWCYFHK
LYEPDSDLSTNFLLIAPNIIVLDRLRTDFDGARIFYEDPLLPDNGYEGQNWQDDFQMTVHIQDEIGLVAPQGNLFLTNIH
RVYESGSAPAFEDQNATDYFLGKKPVGKATDSQVDLGMIVREVPDLVVLNDEAHHLHDAQSAWFKSIEDISLRLRQKGTQ
LSAQFDLSATPKHNNGAIFVQTVSDYPLVEAIRQGVVKTPVLPDGPSRAKLQEKKSAQFTEQYEDYLHLGYLEWKKVYDE
LLPTGKKSVLFVMTDDTRNCDEVAEYLESRYPELKGGVLVIHTKRNGEISEASSGKSKEELDKLREASKSIDDPASPYKA
IVSVMVLREGWDVQNVVSIVGLRPYTSAARILPEQTLGRGLRRMFRGEDVQEKVSVIGTDAFMDFVEGIKVEGVELEYQP
MGERTGPKSPVVIEVDQDNKAKDIDKLDIDLPLLAPRIQREYKNLADLDVAALGHKRVAYRLFTEEEQREIVFRDMNTDQ
QSHVTAMDTAFTPNYQNMIGFFARSIMRDLRLVGGFDVLFGKIKAFVESYLFDRAVDLDDLNTLRNLSEIEATRTLVETI
KGAVNALTVQDTGTTEVRGSIRLAKTRPFLVKEQPFLVPKKSIFNKVVGDSHFELEFAAFLDGCPDIVSFVKNSQSTSFR
IEYQNADGSIANYIPDFIVKQTDSDVWIVETKGREDLDDPLKWDRLQQWCADATAHDEAGRTFSPLFVRQEDWEQYKPAR
FHDAIAAHR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 101047; Mature: 100916

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALHPDFPTDPYAVLLPDVRWYPGDEMLGGMGYEMLLPPLVYKVRKAVAAWRASGYEGAS
CCCCCCCCCCCCEEEECCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PTTAALLNHWFRDEHMMPQADGTVRPFQWYFAQREAVESAIWLYEIERARDPYALMKFDS
CHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEHHHCCCCEEEEEECC
SGRVSKGMFAEDWTRYVLKLATGAGKTKVMSLLMTWCYFHKLYEPDSDLSTNFLLIAPNI
CCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCE
IVLDRLRTDFDGARIFYEDPLLPDNGYEGQNWQDDFQMTVHIQDEIGLVAPQGNLFLTNI
EEEECHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCEEECCCCCEEEHHH
HRVYESGSAPAFEDQNATDYFLGKKPVGKATDSQVDLGMIVREVPDLVVLNDEAHHLHDA
HHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHCCCEEEECCCHHHHHHH
QSAWFKSIEDISLRLRQKGTQLSAQFDLSATPKHNNGAIFVQTVSDYPLVEAIRQGVVKT
HHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCEEEEEECCCCHHHHHHHCCCEEC
PVLPDGPSRAKLQEKKSAQFTEQYEDYLHLGYLEWKKVYDELLPTGKKSVLFVMTDDTRN
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEEEECCCCC
CDEVAEYLESRYPELKGGVLVIHTKRNGEISEASSGKSKEELDKLREASKSIDDPASPYK
HHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHH
AIVSVMVLREGWDVQNVVSIVGLRPYTSAARILPEQTLGRGLRRMFRGEDVQEKVSVIGT
HHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHH
DAFMDFVEGIKVEGVELEYQPMGERTGPKSPVVIEVDQDNKAKDIDKLDIDLPLLAPRIQ
HHHHHHHCCCEECCEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHCHHHH
REYKNLADLDVAALGHKRVAYRLFTEEEQREIVFRDMNTDQQSHVTAMDTAFTPNYQNMI
HHHHHHHHHHHHHHCCHHEEEEECCCCCCCEEEEECCCCCCHHCEEEECCCCCCCHHHHH
GFFARSIMRDLRLVGGFDVLFGKIKAFVESYLFDRAVDLDDLNTLRNLSEIEATRTLVET
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
IKGAVNALTVQDTGTTEVRGSIRLAKTRPFLVKEQPFLVPKKSIFNKVVGDSHFELEFAA
HHHHHHEEEEECCCCCEECCCEEEECCCCEEECCCCCCCCHHHHHHHHHCCCCCEEEHHH
FLDGCPDIVSFVKNSQSTSFRIEYQNADGSIANYIPDFIVKQTDSDVWIVETKGREDLDD
HHCCCHHHHHHHHCCCCCEEEEEEECCCCCHHHHCCHHHEECCCCCEEEEECCCCCCCCC
PLKWDRLQQWCADATAHDEAGRTFSPLFVRQEDWEQYKPARFHDAIAAHR
CHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCHHHHCCCCHHHHHHHCCC
>Mature Secondary Structure 
ALHPDFPTDPYAVLLPDVRWYPGDEMLGGMGYEMLLPPLVYKVRKAVAAWRASGYEGAS
CCCCCCCCCCCEEEECCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PTTAALLNHWFRDEHMMPQADGTVRPFQWYFAQREAVESAIWLYEIERARDPYALMKFDS
CHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEHHHCCCCEEEEEECC
SGRVSKGMFAEDWTRYVLKLATGAGKTKVMSLLMTWCYFHKLYEPDSDLSTNFLLIAPNI
CCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCE
IVLDRLRTDFDGARIFYEDPLLPDNGYEGQNWQDDFQMTVHIQDEIGLVAPQGNLFLTNI
EEEECHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCEEECCCCCEEEHHH
HRVYESGSAPAFEDQNATDYFLGKKPVGKATDSQVDLGMIVREVPDLVVLNDEAHHLHDA
HHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHCCCEEEECCCHHHHHHH
QSAWFKSIEDISLRLRQKGTQLSAQFDLSATPKHNNGAIFVQTVSDYPLVEAIRQGVVKT
HHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCEEEEEECCCCHHHHHHHCCCEEC
PVLPDGPSRAKLQEKKSAQFTEQYEDYLHLGYLEWKKVYDELLPTGKKSVLFVMTDDTRN
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEEEECCCCC
CDEVAEYLESRYPELKGGVLVIHTKRNGEISEASSGKSKEELDKLREASKSIDDPASPYK
HHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHH
AIVSVMVLREGWDVQNVVSIVGLRPYTSAARILPEQTLGRGLRRMFRGEDVQEKVSVIGT
HHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHH
DAFMDFVEGIKVEGVELEYQPMGERTGPKSPVVIEVDQDNKAKDIDKLDIDLPLLAPRIQ
HHHHHHHCCCEECCEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHCHHHH
REYKNLADLDVAALGHKRVAYRLFTEEEQREIVFRDMNTDQQSHVTAMDTAFTPNYQNMI
HHHHHHHHHHHHHHCCHHEEEEECCCCCCCEEEEECCCCCCHHCEEEECCCCCCCHHHHH
GFFARSIMRDLRLVGGFDVLFGKIKAFVESYLFDRAVDLDDLNTLRNLSEIEATRTLVET
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
IKGAVNALTVQDTGTTEVRGSIRLAKTRPFLVKEQPFLVPKKSIFNKVVGDSHFELEFAA
HHHHHHEEEEECCCCCEECCCEEEECCCCEEECCCCCCCCHHHHHHHHHCCCCCEEEHHH
FLDGCPDIVSFVKNSQSTSFRIEYQNADGSIANYIPDFIVKQTDSDVWIVETKGREDLDD
HHCCCHHHHHHHHCCCCCEEEEEEECCCCCHHHHCCHHHEECCCCCEEEEECCCCCCCCC
PLKWDRLQQWCADATAHDEAGRTFSPLFVRQEDWEQYKPARFHDAIAAHR
CHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCHHHHCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA