| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154244504
Identifier: 154244504
GI number: 154244504
Start: 617432
End: 620104
Strand: Direct
Name: 154244504
Synonym: Xaut_0549
Alternate gene names: NA
Gene position: 617432-620104 (Clockwise)
Preceding gene: 154244503
Following gene: 154244505
Centisome position: 11.63
GC content: 60.19
Gene sequence:
>2673_bases GTGGCGCTGCATCCTGATTTTCCGACGGACCCCTATGCGGTGCTGCTCCCGGATGTACGCTGGTATCCCGGCGACGAAAT GCTTGGCGGCATGGGCTATGAAATGTTGCTGCCGCCCCTCGTGTATAAGGTCCGCAAGGCCGTGGCGGCATGGCGAGCGT CCGGCTACGAGGGGGCTTCCCCGACCACGGCGGCGTTGCTCAATCACTGGTTCCGCGACGAGCATATGATGCCGCAGGCC GACGGGACCGTGCGGCCGTTTCAATGGTACTTCGCGCAGCGCGAGGCGGTGGAATCGGCCATCTGGCTTTACGAAATCGA GCGGGCGCGCGACCCGTATGCGCTAATGAAATTCGATTCCTCCGGGCGGGTGTCCAAGGGCATGTTCGCCGAGGACTGGA CCCGTTATGTGCTGAAACTCGCGACCGGCGCGGGGAAGACCAAGGTCATGAGTCTTCTCATGACGTGGTGTTATTTCCAC AAGCTCTATGAGCCGGATTCCGATCTTTCGACGAATTTCCTGCTGATCGCGCCCAACATCATCGTGCTTGATCGGCTGCG TACCGATTTCGACGGCGCCCGGATTTTCTACGAAGACCCGCTGCTCCCGGACAACGGTTATGAGGGGCAGAACTGGCAGG ACGATTTCCAGATGACCGTCCACATCCAGGACGAAATCGGGTTGGTCGCACCGCAGGGCAACCTGTTCCTGACCAATATT CATCGCGTCTATGAATCCGGGTCCGCCCCGGCCTTCGAGGATCAGAATGCGACGGACTATTTCCTCGGAAAAAAGCCGGT CGGCAAGGCGACGGACAGCCAGGTCGATCTCGGCATGATCGTGCGCGAGGTGCCCGATCTCGTCGTTCTGAACGACGAAG CGCACCACCTGCATGACGCGCAGAGCGCGTGGTTCAAATCCATCGAGGACATATCGTTGCGCCTGCGCCAGAAGGGGACG CAGCTCTCGGCGCAATTCGACCTCTCCGCCACGCCCAAGCACAATAACGGCGCGATCTTCGTGCAGACGGTCAGCGATTA TCCGCTGGTCGAGGCGATCCGTCAGGGCGTGGTCAAGACACCGGTGCTGCCGGACGGGCCGTCGCGCGCCAAGCTCCAGG AAAAAAAGAGCGCACAGTTTACCGAGCAATATGAAGACTATCTTCATCTCGGCTATCTCGAATGGAAGAAGGTCTATGAC GAGCTTCTCCCGACAGGGAAGAAGTCCGTGCTGTTCGTCATGACCGACGACACGCGCAATTGCGACGAAGTGGCCGAATA TCTGGAAAGCCGCTACCCCGAGCTGAAAGGCGGCGTGCTGGTTATCCATACCAAGCGCAACGGCGAGATTTCCGAAGCGT CCTCCGGCAAGAGCAAGGAGGAACTGGACAAGCTGCGCGAAGCCAGCAAATCCATCGACGATCCTGCCAGCCCCTACAAA GCCATCGTCTCCGTCATGGTGCTGCGCGAAGGCTGGGATGTGCAGAACGTCGTCTCGATCGTCGGCCTGCGGCCCTACAC CAGCGCGGCGCGCATCCTGCCGGAACAGACCCTTGGCCGCGGGCTGCGGCGCATGTTCCGCGGCGAAGACGTGCAGGAAA AGGTCAGCGTCATCGGCACGGACGCCTTCATGGACTTTGTCGAAGGGATCAAGGTCGAGGGCGTCGAACTCGAATACCAG CCGATGGGCGAGCGAACCGGCCCCAAATCGCCGGTCGTCATCGAGGTCGATCAGGACAACAAGGCCAAGGATATCGACAA GCTCGACATCGACCTGCCGCTCCTCGCGCCCCGTATCCAGCGCGAGTACAAGAATCTCGCCGATCTTGATGTGGCCGCGC TGGGCCACAAGCGCGTCGCCTATCGCCTGTTCACGGAGGAAGAGCAGCGCGAGATCGTCTTCCGCGACATGAACACCGAC CAGCAAAGCCACGTCACGGCGATGGACACGGCCTTCACGCCCAACTACCAGAACATGATCGGGTTCTTTGCGCGCTCCAT TATGCGCGACCTGCGGCTTGTCGGCGGATTCGATGTCCTCTTCGGCAAGATCAAGGCGTTCGTGGAGTCATATCTCTTCG ATCGTGCCGTGGACCTGGATGACCTCAACACGCTGCGAAATCTGTCCGAGATCGAGGCCACGCGCACACTGGTCGAAACC ATAAAAGGTGCCGTCAACGCGCTCACGGTGCAGGATACCGGCACGACCGAGGTGCGCGGCTCCATCCGGCTGGCCAAAAC CCGGCCGTTCCTCGTGAAGGAGCAGCCTTTCCTCGTACCGAAGAAATCGATCTTCAACAAGGTCGTCGGCGACTCGCATT TCGAGCTGGAATTCGCGGCGTTTCTTGACGGCTGCCCCGACATCGTCTCGTTTGTGAAGAACAGCCAGAGTACGTCCTTC CGCATTGAATACCAGAACGCCGACGGCAGTATCGCCAACTACATCCCCGACTTCATCGTAAAGCAGACCGACAGCGATGT CTGGATCGTCGAAACCAAAGGCCGCGAAGACCTCGACGATCCGCTCAAGTGGGACCGTCTTCAGCAGTGGTGCGCCGATG CCACCGCGCACGACGAAGCCGGGCGTACCTTCAGCCCTCTGTTCGTCCGGCAAGAGGACTGGGAGCAGTACAAGCCGGCC CGTTTCCACGATGCGATCGCCGCTCATCGGTAA
Upstream 100 bases:
>100_bases GACGCGATCATTGCGCGGGGCCGGAACCTGTTCGCGCTGGCAAGAGCAATATGGACGTTGCCCGCGGTGAACGCGGCGGA AGCCTGACGGGGGGAACGAC
Downstream 100 bases:
>100_bases AGTCCGCCGGTTCCTGTTCCTTTCCGTCGTCGGCTCAATCCATGACGCCATTGCGGCCGGGCGCGCCGCCCGGTCAACGG CCTGCCCGCGCCACCCCGGC
Product: type III restriction protein res subunit
Products: NA
Alternate protein names: Type III Restriction Res Subunit; Type III Restriction- Helicase Subunit; Type III Restriction; DNA Restriction- System Restriction; Type III Restriction- System Res Subunit; PstII Restriction- Res Subunit; Type III Restriction Res Subunit Family; Type III Restriction- System; Type III Restriction-; Type III Restriction- System Restriction Subunit; Type III Restriction- R/Helicase Subunit; Type III Restriction- System R Subunit
Number of amino acids: Translated: 890; Mature: 889
Protein sequence:
>890_residues MALHPDFPTDPYAVLLPDVRWYPGDEMLGGMGYEMLLPPLVYKVRKAVAAWRASGYEGASPTTAALLNHWFRDEHMMPQA DGTVRPFQWYFAQREAVESAIWLYEIERARDPYALMKFDSSGRVSKGMFAEDWTRYVLKLATGAGKTKVMSLLMTWCYFH KLYEPDSDLSTNFLLIAPNIIVLDRLRTDFDGARIFYEDPLLPDNGYEGQNWQDDFQMTVHIQDEIGLVAPQGNLFLTNI HRVYESGSAPAFEDQNATDYFLGKKPVGKATDSQVDLGMIVREVPDLVVLNDEAHHLHDAQSAWFKSIEDISLRLRQKGT QLSAQFDLSATPKHNNGAIFVQTVSDYPLVEAIRQGVVKTPVLPDGPSRAKLQEKKSAQFTEQYEDYLHLGYLEWKKVYD ELLPTGKKSVLFVMTDDTRNCDEVAEYLESRYPELKGGVLVIHTKRNGEISEASSGKSKEELDKLREASKSIDDPASPYK AIVSVMVLREGWDVQNVVSIVGLRPYTSAARILPEQTLGRGLRRMFRGEDVQEKVSVIGTDAFMDFVEGIKVEGVELEYQ PMGERTGPKSPVVIEVDQDNKAKDIDKLDIDLPLLAPRIQREYKNLADLDVAALGHKRVAYRLFTEEEQREIVFRDMNTD QQSHVTAMDTAFTPNYQNMIGFFARSIMRDLRLVGGFDVLFGKIKAFVESYLFDRAVDLDDLNTLRNLSEIEATRTLVET IKGAVNALTVQDTGTTEVRGSIRLAKTRPFLVKEQPFLVPKKSIFNKVVGDSHFELEFAAFLDGCPDIVSFVKNSQSTSF RIEYQNADGSIANYIPDFIVKQTDSDVWIVETKGREDLDDPLKWDRLQQWCADATAHDEAGRTFSPLFVRQEDWEQYKPA RFHDAIAAHR
Sequences:
>Translated_890_residues MALHPDFPTDPYAVLLPDVRWYPGDEMLGGMGYEMLLPPLVYKVRKAVAAWRASGYEGASPTTAALLNHWFRDEHMMPQA DGTVRPFQWYFAQREAVESAIWLYEIERARDPYALMKFDSSGRVSKGMFAEDWTRYVLKLATGAGKTKVMSLLMTWCYFH KLYEPDSDLSTNFLLIAPNIIVLDRLRTDFDGARIFYEDPLLPDNGYEGQNWQDDFQMTVHIQDEIGLVAPQGNLFLTNI HRVYESGSAPAFEDQNATDYFLGKKPVGKATDSQVDLGMIVREVPDLVVLNDEAHHLHDAQSAWFKSIEDISLRLRQKGT QLSAQFDLSATPKHNNGAIFVQTVSDYPLVEAIRQGVVKTPVLPDGPSRAKLQEKKSAQFTEQYEDYLHLGYLEWKKVYD ELLPTGKKSVLFVMTDDTRNCDEVAEYLESRYPELKGGVLVIHTKRNGEISEASSGKSKEELDKLREASKSIDDPASPYK AIVSVMVLREGWDVQNVVSIVGLRPYTSAARILPEQTLGRGLRRMFRGEDVQEKVSVIGTDAFMDFVEGIKVEGVELEYQ PMGERTGPKSPVVIEVDQDNKAKDIDKLDIDLPLLAPRIQREYKNLADLDVAALGHKRVAYRLFTEEEQREIVFRDMNTD QQSHVTAMDTAFTPNYQNMIGFFARSIMRDLRLVGGFDVLFGKIKAFVESYLFDRAVDLDDLNTLRNLSEIEATRTLVET IKGAVNALTVQDTGTTEVRGSIRLAKTRPFLVKEQPFLVPKKSIFNKVVGDSHFELEFAAFLDGCPDIVSFVKNSQSTSF RIEYQNADGSIANYIPDFIVKQTDSDVWIVETKGREDLDDPLKWDRLQQWCADATAHDEAGRTFSPLFVRQEDWEQYKPA RFHDAIAAHR >Mature_889_residues ALHPDFPTDPYAVLLPDVRWYPGDEMLGGMGYEMLLPPLVYKVRKAVAAWRASGYEGASPTTAALLNHWFRDEHMMPQAD GTVRPFQWYFAQREAVESAIWLYEIERARDPYALMKFDSSGRVSKGMFAEDWTRYVLKLATGAGKTKVMSLLMTWCYFHK LYEPDSDLSTNFLLIAPNIIVLDRLRTDFDGARIFYEDPLLPDNGYEGQNWQDDFQMTVHIQDEIGLVAPQGNLFLTNIH RVYESGSAPAFEDQNATDYFLGKKPVGKATDSQVDLGMIVREVPDLVVLNDEAHHLHDAQSAWFKSIEDISLRLRQKGTQ LSAQFDLSATPKHNNGAIFVQTVSDYPLVEAIRQGVVKTPVLPDGPSRAKLQEKKSAQFTEQYEDYLHLGYLEWKKVYDE LLPTGKKSVLFVMTDDTRNCDEVAEYLESRYPELKGGVLVIHTKRNGEISEASSGKSKEELDKLREASKSIDDPASPYKA IVSVMVLREGWDVQNVVSIVGLRPYTSAARILPEQTLGRGLRRMFRGEDVQEKVSVIGTDAFMDFVEGIKVEGVELEYQP MGERTGPKSPVVIEVDQDNKAKDIDKLDIDLPLLAPRIQREYKNLADLDVAALGHKRVAYRLFTEEEQREIVFRDMNTDQ QSHVTAMDTAFTPNYQNMIGFFARSIMRDLRLVGGFDVLFGKIKAFVESYLFDRAVDLDDLNTLRNLSEIEATRTLVETI KGAVNALTVQDTGTTEVRGSIRLAKTRPFLVKEQPFLVPKKSIFNKVVGDSHFELEFAAFLDGCPDIVSFVKNSQSTSFR IEYQNADGSIANYIPDFIVKQTDSDVWIVETKGREDLDDPLKWDRLQQWCADATAHDEAGRTFSPLFVRQEDWEQYKPAR FHDAIAAHR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 101047; Mature: 100916
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALHPDFPTDPYAVLLPDVRWYPGDEMLGGMGYEMLLPPLVYKVRKAVAAWRASGYEGAS CCCCCCCCCCCCEEEECCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC PTTAALLNHWFRDEHMMPQADGTVRPFQWYFAQREAVESAIWLYEIERARDPYALMKFDS CHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEHHHCCCCEEEEEECC SGRVSKGMFAEDWTRYVLKLATGAGKTKVMSLLMTWCYFHKLYEPDSDLSTNFLLIAPNI CCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCE IVLDRLRTDFDGARIFYEDPLLPDNGYEGQNWQDDFQMTVHIQDEIGLVAPQGNLFLTNI EEEECHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCEEECCCCCEEEHHH HRVYESGSAPAFEDQNATDYFLGKKPVGKATDSQVDLGMIVREVPDLVVLNDEAHHLHDA HHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHCCCEEEECCCHHHHHHH QSAWFKSIEDISLRLRQKGTQLSAQFDLSATPKHNNGAIFVQTVSDYPLVEAIRQGVVKT HHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCEEEEEECCCCHHHHHHHCCCEEC PVLPDGPSRAKLQEKKSAQFTEQYEDYLHLGYLEWKKVYDELLPTGKKSVLFVMTDDTRN CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEEEECCCCC CDEVAEYLESRYPELKGGVLVIHTKRNGEISEASSGKSKEELDKLREASKSIDDPASPYK HHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHH AIVSVMVLREGWDVQNVVSIVGLRPYTSAARILPEQTLGRGLRRMFRGEDVQEKVSVIGT HHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHH DAFMDFVEGIKVEGVELEYQPMGERTGPKSPVVIEVDQDNKAKDIDKLDIDLPLLAPRIQ HHHHHHHCCCEECCEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHCHHHH REYKNLADLDVAALGHKRVAYRLFTEEEQREIVFRDMNTDQQSHVTAMDTAFTPNYQNMI HHHHHHHHHHHHHHCCHHEEEEECCCCCCCEEEEECCCCCCHHCEEEECCCCCCCHHHHH GFFARSIMRDLRLVGGFDVLFGKIKAFVESYLFDRAVDLDDLNTLRNLSEIEATRTLVET HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH IKGAVNALTVQDTGTTEVRGSIRLAKTRPFLVKEQPFLVPKKSIFNKVVGDSHFELEFAA HHHHHHEEEEECCCCCEECCCEEEECCCCEEECCCCCCCCHHHHHHHHHCCCCCEEEHHH FLDGCPDIVSFVKNSQSTSFRIEYQNADGSIANYIPDFIVKQTDSDVWIVETKGREDLDD HHCCCHHHHHHHHCCCCCEEEEEEECCCCCHHHHCCHHHEECCCCCEEEEECCCCCCCCC PLKWDRLQQWCADATAHDEAGRTFSPLFVRQEDWEQYKPARFHDAIAAHR CHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCHHHHCCCCHHHHHHHCCC >Mature Secondary Structure ALHPDFPTDPYAVLLPDVRWYPGDEMLGGMGYEMLLPPLVYKVRKAVAAWRASGYEGAS CCCCCCCCCCCEEEECCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC PTTAALLNHWFRDEHMMPQADGTVRPFQWYFAQREAVESAIWLYEIERARDPYALMKFDS CHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEHHHCCCCEEEEEECC SGRVSKGMFAEDWTRYVLKLATGAGKTKVMSLLMTWCYFHKLYEPDSDLSTNFLLIAPNI CCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCE IVLDRLRTDFDGARIFYEDPLLPDNGYEGQNWQDDFQMTVHIQDEIGLVAPQGNLFLTNI EEEECHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCEEECCCCCEEEHHH HRVYESGSAPAFEDQNATDYFLGKKPVGKATDSQVDLGMIVREVPDLVVLNDEAHHLHDA HHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHCCCEEEECCCHHHHHHH QSAWFKSIEDISLRLRQKGTQLSAQFDLSATPKHNNGAIFVQTVSDYPLVEAIRQGVVKT HHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCEEEEEECCCCHHHHHHHCCCEEC PVLPDGPSRAKLQEKKSAQFTEQYEDYLHLGYLEWKKVYDELLPTGKKSVLFVMTDDTRN CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEEEECCCCC CDEVAEYLESRYPELKGGVLVIHTKRNGEISEASSGKSKEELDKLREASKSIDDPASPYK HHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHH AIVSVMVLREGWDVQNVVSIVGLRPYTSAARILPEQTLGRGLRRMFRGEDVQEKVSVIGT HHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHH DAFMDFVEGIKVEGVELEYQPMGERTGPKSPVVIEVDQDNKAKDIDKLDIDLPLLAPRIQ HHHHHHHCCCEECCEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHCHHHH REYKNLADLDVAALGHKRVAYRLFTEEEQREIVFRDMNTDQQSHVTAMDTAFTPNYQNMI HHHHHHHHHHHHHHCCHHEEEEECCCCCCCEEEEECCCCCCHHCEEEECCCCCCCHHHHH GFFARSIMRDLRLVGGFDVLFGKIKAFVESYLFDRAVDLDDLNTLRNLSEIEATRTLVET HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH IKGAVNALTVQDTGTTEVRGSIRLAKTRPFLVKEQPFLVPKKSIFNKVVGDSHFELEFAA HHHHHHEEEEECCCCCEECCCEEEECCCCEEECCCCCCCCHHHHHHHHHCCCCCEEEHHH FLDGCPDIVSFVKNSQSTSFRIEYQNADGSIANYIPDFIVKQTDSDVWIVETKGREDLDD HHCCCHHHHHHHHCCCCCEEEEEEECCCCCHHHHCCHHHEECCCCCEEEEECCCCCCCCC PLKWDRLQQWCADATAHDEAGRTFSPLFVRQEDWEQYKPARFHDAIAAHR CHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCHHHHCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA