| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154244483
Identifier: 154244483
GI number: 154244483
Start: 593720
End: 594448
Strand: Direct
Name: 154244483
Synonym: Xaut_0527
Alternate gene names: NA
Gene position: 593720-594448 (Clockwise)
Preceding gene: 154244481
Following gene: 154244484
Centisome position: 11.18
GC content: 66.53
Gene sequence:
>729_bases ATGCCGGCCCACAACGAAACCCCGCGGCAGGACATCTACAGCCGCATCACCAACCAGATCATCGAAGCCCTGGAACAGGG CGTGAAACCCTGGACCCAACCCTGGAACGCCGCTCACGCCGCCGGTCACGTCTCCCGGCCCCTGCGCCATAACGGCGAGC CCTATGCGGGCATCAACGTCCTGACGCTCTGGGCGTCCGCCATGTCCGGCCACTACACCGCGCCGATCTGGATGACCTTC CGGCAGGCCATCGAACTGGGCGGCTGCGTCCGCAAGGGCGAGAAGGGCTCCCCGGTCGTCTACGCCAACGCCATCCGCCG TACCGAAACCGACGAGGCGACCGGCGACGATGTGGAGCGCAGCATCCCCTTTCTGAAGGCCTACACCGTCTTCAACGTCG AGCAGATTGACGGCCTGCCGGAGCGCGTTCACGCCTCGGCGCAACCCGCCGACAATCCCGCGCAGCGTATCGCCCATGCC GAAACCTTCTTCGCCGCCACGGGCGCTGATATCCGCCATGGCGGGGACAGCGCCTATTACAGCCCGGCCCTGGACTATAT CCAGATGCCGCCCTTCGAAGCCTTCCGCGATGCGGAGGGTTACTACGCAACGCTCGCCCATGAGGCGACGCACTGGACCC GGCACGCAACGCGCCTTGACCGCGACCTCGGGCGCAAGCGCTTCGGCGATGCGGGCTACGCCCGCGAGGAACTGGTCGCC TTATCTTGA
Upstream 100 bases:
>100_bases CCTTGGCCGGGACCGTGTTAGGGCCTGACCCGCCGGCTCAATCGCCCGGCCTTTCCTGCCCGCGTCTTGAGGAAAACCCC CAGCGCAAAGGAGCAGGATC
Downstream 100 bases:
>100_bases CAGTCTGCACCGATTGCCAGTGTGCTGCTGATGTCGATGCAACAGGACTGACGGAGGCGTTATCCAGGCCGGCCGCAGCG CTCCCACATAGCTGGCGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 242; Mature: 241
Protein sequence:
>242_residues MPAHNETPRQDIYSRITNQIIEALEQGVKPWTQPWNAAHAAGHVSRPLRHNGEPYAGINVLTLWASAMSGHYTAPIWMTF RQAIELGGCVRKGEKGSPVVYANAIRRTETDEATGDDVERSIPFLKAYTVFNVEQIDGLPERVHASAQPADNPAQRIAHA ETFFAATGADIRHGGDSAYYSPALDYIQMPPFEAFRDAEGYYATLAHEATHWTRHATRLDRDLGRKRFGDAGYAREELVA LS
Sequences:
>Translated_242_residues MPAHNETPRQDIYSRITNQIIEALEQGVKPWTQPWNAAHAAGHVSRPLRHNGEPYAGINVLTLWASAMSGHYTAPIWMTF RQAIELGGCVRKGEKGSPVVYANAIRRTETDEATGDDVERSIPFLKAYTVFNVEQIDGLPERVHASAQPADNPAQRIAHA ETFFAATGADIRHGGDSAYYSPALDYIQMPPFEAFRDAEGYYATLAHEATHWTRHATRLDRDLGRKRFGDAGYAREELVA LS >Mature_241_residues PAHNETPRQDIYSRITNQIIEALEQGVKPWTQPWNAAHAAGHVSRPLRHNGEPYAGINVLTLWASAMSGHYTAPIWMTFR QAIELGGCVRKGEKGSPVVYANAIRRTETDEATGDDVERSIPFLKAYTVFNVEQIDGLPERVHASAQPADNPAQRIAHAE TFFAATGADIRHGGDSAYYSPALDYIQMPPFEAFRDAEGYYATLAHEATHWTRHATRLDRDLGRKRFGDAGYAREELVAL S
Specific function: Unknown
COG id: COG4227
COG function: function code L; Antirestriction protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017113 - InterPro: IPR013610 [H]
Pfam domain/function: PF08401 DUF1738 [H]
EC number: NA
Molecular weight: Translated: 26916; Mature: 26785
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAHNETPRQDIYSRITNQIIEALEQGVKPWTQPWNAAHAAGHVSRPLRHNGEPYAGINV CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCHHHCCCCCCCCHHH LTLWASAMSGHYTAPIWMTFRQAIELGGCVRKGEKGSPVVYANAIRRTETDEATGDDVER HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHCCCCCCCCCHHHH SIPFLKAYTVFNVEQIDGLPERVHASAQPADNPAQRIAHAETFFAATGADIRHGGDSAYY HCCHHHHHHEECHHHHCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC SPALDYIQMPPFEAFRDAEGYYATLAHEATHWTRHATRLDRDLGRKRFGDAGYAREELVA CHHHHHHCCCCHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHC LS CC >Mature Secondary Structure PAHNETPRQDIYSRITNQIIEALEQGVKPWTQPWNAAHAAGHVSRPLRHNGEPYAGINV CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCHHHCCCCCCCCHHH LTLWASAMSGHYTAPIWMTFRQAIELGGCVRKGEKGSPVVYANAIRRTETDEATGDDVER HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHCCCCCCCCCHHHH SIPFLKAYTVFNVEQIDGLPERVHASAQPADNPAQRIAHAETFFAATGADIRHGGDSAYY HCCHHHHHHEECHHHHCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC SPALDYIQMPPFEAFRDAEGYYATLAHEATHWTRHATRLDRDLGRKRFGDAGYAREELVA CHHHHHHCCCCHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHC LS CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]