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The map label for this gene is yafK [H]

Identifier: 154244467

GI number: 154244467

Start: 565319

End: 566671

Strand: Direct

Name: yafK [H]

Synonym: Xaut_0510

Alternate gene names: 154244467

Gene position: 565319-566671 (Clockwise)

Preceding gene: 154244466

Following gene: 154244468

Centisome position: 10.65

GC content: 68.44

Gene sequence:

>1353_bases
GTGAACCGTTTCGCGTCGAACCGTCCGTGGACGATGGTGTCGTCCCGCATCCGCATGGTGGCCCTGGCCGCCACCGCAGC
GCTCGCGCTCGCCGCCTGCAACCAGACCGATTCCGAAGCCTCCCGCAGGGCCAACAAGCCGTTGACACCCGAGATGGTGT
CCCTGATCGCGCAGAAGGACATGTCGCCGGCGAGCCCGATCCTCGTGCGCATCTTCAAGCAGGAGGCCGAGCTTGAGGTG
TGGAAGGCCACCTCCGACGGCTCGTTCGCCCTGCTCAAGACCTATCCCATCTGCCGCTGGTCGGGTGAGCTGGGCCCCAA
GGTGAGCATGGGTGACCGGCAGGCGCCGGAGGGCTTCTACACCATCACCCCGGGGCAGATGAACCCGAACTCCAGCTACT
ATCTGTCCTTCAACCTCGGATTCCCCAACGCCTTCGACCGCTCCTACGGGCGGACCGGTGAATTCCTCATGGTGCACGGC
GACTGTTCGTCGGCTGGCTGCTACGCCATGACGGACGAGCAGATTTCCGAGATCTTCTCGCTGGCGCGGGAGAGCTTTGC
CGGCGGCCAGCGCGCCTTCCAGGTGCAGGCCTATCCCTTCCGCATGACGCCGAAGAACCTCGCTCGGCACCGCAACAACC
CGAACATGGCATTCTGGCGTAACCTGAAGCAGGGCTACGACCATTTCGAGGTCACCAAACAGGTGCCCAAGGTCAATGTC
TGCGGGCGCTCCTATGTGTTCGACGCCGAGCCCGTGCCGGGCCGGACCTTCGACGCCAACGTGTCCTGCCCGCCCTACCA
GGTGCCGCCCCAGGTGGCCTCGGCGGTGGCCGAGAAGCAGCGCAGCGACGATGCCCAGGTGGCGGCGCTCGCCCCGTCCG
CACCGCTGGCGCCGGTGCGCACCAATGCGGACGGCGGCATGCACCCGGTGTTCCTCGCCAAGCTCAAGGAGCGCGAGAGC
GGCCAGATGTCCTTCGCGGCCGCGCCCGGGTCCCTGCCCGAATATGTGAACCCGCCCAAGATGACCCCGGAGAAGGTGGC
ACTGGACACCGAGACGCCGGTGGCCCCCGCCGCGGCGGCGGCAGGAGCCGCGGCCGCGCCGGCTCCGCTACCGACCGCCA
AGCCTGCCCCGGCGGCGCGGGTGGTGACGCCGGCGGCCAAGCCGGTGGCGGCTTCCGCAACGGCCAAGCCTGCTACCACG
GCGTCTGCGGCGAAGCCGGCGAATTCCAGCTCGGACAAGCCGGTTGCGCAGGCCTACAAGCCCGCCACGGTCGCCTCTGT
CGGCACGCTGACGCCGCCGGCCTCGGTGTCGGGTGGCTCGGCCATCATGTCCACCGGGACGTTCTCGCAATAA

Upstream 100 bases:

>100_bases
CCAACGCTCCGCACGGCTGGCGATGACGCTAACGCATCGTCAAGGGGAAGGGGCTAACCCTGTCGGTCCATGTGGCCGAT
ACGGACCCAGGAGTTGCGCG

Downstream 100 bases:

>100_bases
GCCTCCTGCCTCCAGCATCAGCCTGGTTGTGGCCATGGCCCTTGTGGCGGCCGCCTGGCCGCAGCTAGGCTTGCGCATGG
GGCGCGTCTGCCCAGTCCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 450; Mature: 450

Protein sequence:

>450_residues
MNRFASNRPWTMVSSRIRMVALAATAALALAACNQTDSEASRRANKPLTPEMVSLIAQKDMSPASPILVRIFKQEAELEV
WKATSDGSFALLKTYPICRWSGELGPKVSMGDRQAPEGFYTITPGQMNPNSSYYLSFNLGFPNAFDRSYGRTGEFLMVHG
DCSSAGCYAMTDEQISEIFSLARESFAGGQRAFQVQAYPFRMTPKNLARHRNNPNMAFWRNLKQGYDHFEVTKQVPKVNV
CGRSYVFDAEPVPGRTFDANVSCPPYQVPPQVASAVAEKQRSDDAQVAALAPSAPLAPVRTNADGGMHPVFLAKLKERES
GQMSFAAAPGSLPEYVNPPKMTPEKVALDTETPVAPAAAAAGAAAAPAPLPTAKPAPAARVVTPAAKPVAASATAKPATT
ASAAKPANSSSDKPVAQAYKPATVASVGTLTPPASVSGGSAIMSTGTFSQ

Sequences:

>Translated_450_residues
MNRFASNRPWTMVSSRIRMVALAATAALALAACNQTDSEASRRANKPLTPEMVSLIAQKDMSPASPILVRIFKQEAELEV
WKATSDGSFALLKTYPICRWSGELGPKVSMGDRQAPEGFYTITPGQMNPNSSYYLSFNLGFPNAFDRSYGRTGEFLMVHG
DCSSAGCYAMTDEQISEIFSLARESFAGGQRAFQVQAYPFRMTPKNLARHRNNPNMAFWRNLKQGYDHFEVTKQVPKVNV
CGRSYVFDAEPVPGRTFDANVSCPPYQVPPQVASAVAEKQRSDDAQVAALAPSAPLAPVRTNADGGMHPVFLAKLKERES
GQMSFAAAPGSLPEYVNPPKMTPEKVALDTETPVAPAAAAAGAAAAPAPLPTAKPAPAARVVTPAAKPVAASATAKPATT
ASAAKPANSSSDKPVAQAYKPATVASVGTLTPPASVSGGSAIMSTGTFSQ
>Mature_450_residues
MNRFASNRPWTMVSSRIRMVALAATAALALAACNQTDSEASRRANKPLTPEMVSLIAQKDMSPASPILVRIFKQEAELEV
WKATSDGSFALLKTYPICRWSGELGPKVSMGDRQAPEGFYTITPGQMNPNSSYYLSFNLGFPNAFDRSYGRTGEFLMVHG
DCSSAGCYAMTDEQISEIFSLARESFAGGQRAFQVQAYPFRMTPKNLARHRNNPNMAFWRNLKQGYDHFEVTKQVPKVNV
CGRSYVFDAEPVPGRTFDANVSCPPYQVPPQVASAVAEKQRSDDAQVAALAPSAPLAPVRTNADGGMHPVFLAKLKERES
GQMSFAAAPGSLPEYVNPPKMTPEKVALDTETPVAPAAAAAGAAAAPAPLPTAKPAPAARVVTPAAKPVAASATAKPATT
ASAAKPANSSSDKPVAQAYKPATVASVGTLTPPASVSGGSAIMSTGTFSQ

Specific function: Unknown

COG id: COG3034

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the YkuD family [H]

Homologues:

Organism=Escherichia coli, GI1786418, Length=183, Percent_Identity=46.448087431694, Blast_Score=195, Evalue=4e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005490 [H]

Pfam domain/function: PF03734 YkuD [H]

EC number: NA

Molecular weight: Translated: 47624; Mature: 47624

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRFASNRPWTMVSSRIRMVALAATAALALAACNQTDSEASRRANKPLTPEMVSLIAQKD
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHC
MSPASPILVRIFKQEAELEVWKATSDGSFALLKTYPICRWSGELGPKVSMGDRQAPEGFY
CCCCCHHHHHHHHHCCCEEEEEECCCCCEEEEEECCEEEECCCCCCCCCCCCCCCCCCEE
TITPGQMNPNSSYYLSFNLGFPNAFDRSYGRTGEFLMVHGDCSSAGCYAMTDEQISEIFS
EECCCCCCCCCCEEEEEECCCCCHHHHCCCCCCCEEEEECCCCCCCEEEECHHHHHHHHH
LARESFAGGQRAFQVQAYPFRMTPKNLARHRNNPNMAFWRNLKQGYDHFEVTKQVPKVNV
HHHHHHCCCCEEEEEEEEEEECCHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHCCCEEE
CGRSYVFDAEPVPGRTFDANVSCPPYQVPPQVASAVAEKQRSDDAQVAALAPSAPLAPVR
CCCEEEECCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCEE
TNADGGMHPVFLAKLKERESGQMSFAAAPGSLPEYVNPPKMTPEKVALDTETPVAPAAAA
ECCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCHHHEEECCCCCCCCHHHH
AGAAAAPAPLPTAKPAPAARVVTPAAKPVAASATAKPATTASAAKPANSSSDKPVAQAYK
CCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCC
PATVASVGTLTPPASVSGGSAIMSTGTFSQ
CCHHHCCCCCCCCCCCCCCCEEECCCCCCC
>Mature Secondary Structure
MNRFASNRPWTMVSSRIRMVALAATAALALAACNQTDSEASRRANKPLTPEMVSLIAQKD
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHC
MSPASPILVRIFKQEAELEVWKATSDGSFALLKTYPICRWSGELGPKVSMGDRQAPEGFY
CCCCCHHHHHHHHHCCCEEEEEECCCCCEEEEEECCEEEECCCCCCCCCCCCCCCCCCEE
TITPGQMNPNSSYYLSFNLGFPNAFDRSYGRTGEFLMVHGDCSSAGCYAMTDEQISEIFS
EECCCCCCCCCCEEEEEECCCCCHHHHCCCCCCCEEEEECCCCCCCEEEECHHHHHHHHH
LARESFAGGQRAFQVQAYPFRMTPKNLARHRNNPNMAFWRNLKQGYDHFEVTKQVPKVNV
HHHHHHCCCCEEEEEEEEEEECCHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHCCCEEE
CGRSYVFDAEPVPGRTFDANVSCPPYQVPPQVASAVAEKQRSDDAQVAALAPSAPLAPVR
CCCEEEECCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCEE
TNADGGMHPVFLAKLKERESGQMSFAAAPGSLPEYVNPPKMTPEKVALDTETPVAPAAAA
ECCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCHHHEEECCCCCCCCHHHH
AGAAAAPAPLPTAKPAPAARVVTPAAKPVAASATAKPATTASAAKPANSSSDKPVAQAYK
CCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCC
PATVASVGTLTPPASVSGGSAIMSTGTFSQ
CCHHHCCCCCCCCCCCCCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]