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The map label for this gene is dapB [H]

Identifier: 154244316

GI number: 154244316

Start: 372227

End: 373129

Strand: Direct

Name: dapB [H]

Synonym: Xaut_0359

Alternate gene names: 154244316

Gene position: 372227-373129 (Clockwise)

Preceding gene: 154244315

Following gene: 154244317

Centisome position: 7.01

GC content: 69.88

Gene sequence:

>903_bases
TTGGGGCCGTTCTCGCCAGGGCAGTGCCACCGTCTTTGCCGCGGCGCCGTGAAGCGCCGCCCGGCCACGCGAAGGACCAG
AAAAATCGTGTCTCAGCTGCGCATCGTCATCTCCGGAGCCGGCGGCCGCATGGGCCGCGCCCTCATCAAGGCCATCTCGG
AAACCGAGGGCCTCGCCCTGGTGGGGGCGCTGGAATATTCCGGCTCGTCCTTTCTCGGCGAGGATGCCGGGGCCATGAGC
GGCCTGAAGCCCAACGGCGTCACGGTGGAAAGCGATGCGGCCCCGACCCTCAACGGCGCCGACGTGGTGGTGGATTTCTC
CACCCCCTCCGCCTCGGTGCGGCTGGCGGAGACCCTGGCGGGGGCGGGCATCGCCCATGTCATCGGCACCACGGGCTTCT
CCAACGAGGACAACGCGGCCATTGCCGCCGCCGCCCGTCGCACGCCCATCATGAAGTCCGGCAACATGAGCCTCGGGGTC
AACCTGCTGGCCGCCCTCACCCGCCGGGTGGCGGCGACGCTGGACGACAGCTTCGACATCGAGATCGTGGAGATGCACCA
CAACAAGAAGGTGGATGCGCCCTCCGGCACGGCGCTGCTTTTGGGCGAGGCCGCCGCCCAGGGCCGCGGGCGCCATCTCG
ACGAATGCTCCGAGCGCGGCCGCGACGGGGTCACCGGCGCGCGCAAGCCTGGCGCCATCGGCTTTGCCAGCCTGCGTGGC
GGCTCGGTGGTGGGCGAGCATATGGTGATCTTCGCCGGCCAGGCCGAGCGTATCGAGCTGGTGCACAAGGCCGAGGACCG
CATGATCTTCGCCCGCGGCGCGTTGACGGCGGCGCGTTGGCTGAAGGGCCGCGAGCCGGGCCTTTATTCCATGGCCGACG
TGCTCGGCCTCGGCGATTTCTGA

Upstream 100 bases:

>100_bases
GCGCCATCCGCCAGTCGGCGTCGGTGGCAGACCTTGTCCTCATCTCCGGCTATACCGGGCGCGAGGCGCCCCCCTCCTGA
CGGACCCCCGCCCCCGGCCC

Downstream 100 bases:

>100_bases
GCGCCGAATTCTGACCGCCGATTCCTTGTCCGCAGATTTTCGAGCCGGGAGCCACGCCCGGAGACTACCCAGGAGCTTTC
CATGTCCGACCGCATCCTCG

Product: dihydrodipicolinate reductase

Products: NA

Alternate protein names: DHPR [H]

Number of amino acids: Translated: 300; Mature: 299

Protein sequence:

>300_residues
MGPFSPGQCHRLCRGAVKRRPATRRTRKIVSQLRIVISGAGGRMGRALIKAISETEGLALVGALEYSGSSFLGEDAGAMS
GLKPNGVTVESDAAPTLNGADVVVDFSTPSASVRLAETLAGAGIAHVIGTTGFSNEDNAAIAAAARRTPIMKSGNMSLGV
NLLAALTRRVAATLDDSFDIEIVEMHHNKKVDAPSGTALLLGEAAAQGRGRHLDECSERGRDGVTGARKPGAIGFASLRG
GSVVGEHMVIFAGQAERIELVHKAEDRMIFARGALTAARWLKGREPGLYSMADVLGLGDF

Sequences:

>Translated_300_residues
MGPFSPGQCHRLCRGAVKRRPATRRTRKIVSQLRIVISGAGGRMGRALIKAISETEGLALVGALEYSGSSFLGEDAGAMS
GLKPNGVTVESDAAPTLNGADVVVDFSTPSASVRLAETLAGAGIAHVIGTTGFSNEDNAAIAAAARRTPIMKSGNMSLGV
NLLAALTRRVAATLDDSFDIEIVEMHHNKKVDAPSGTALLLGEAAAQGRGRHLDECSERGRDGVTGARKPGAIGFASLRG
GSVVGEHMVIFAGQAERIELVHKAEDRMIFARGALTAARWLKGREPGLYSMADVLGLGDF
>Mature_299_residues
GPFSPGQCHRLCRGAVKRRPATRRTRKIVSQLRIVISGAGGRMGRALIKAISETEGLALVGALEYSGSSFLGEDAGAMSG
LKPNGVTVESDAAPTLNGADVVVDFSTPSASVRLAETLAGAGIAHVIGTTGFSNEDNAAIAAAARRTPIMKSGNMSLGVN
LLAALTRRVAATLDDSFDIEIVEMHHNKKVDAPSGTALLLGEAAAQGRGRHLDECSERGRDGVTGARKPGAIGFASLRGG
SVVGEHMVIFAGQAERIELVHKAEDRMIFARGALTAARWLKGREPGLYSMADVLGLGDF

Specific function: Biosynthesis of diaminopimelate and lysine from aspartate semialdehyde; second step. [C]

COG id: COG0289

COG function: function code E; Dihydrodipicolinate reductase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dihydrodipicolinate reductase family [H]

Homologues:

Organism=Escherichia coli, GI1786214, Length=270, Percent_Identity=46.2962962962963, Blast_Score=224, Evalue=5e-60,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022663
- InterPro:   IPR000846
- InterPro:   IPR022664
- InterPro:   IPR011770
- InterPro:   IPR016040 [H]

Pfam domain/function: PF05173 DapB_C; PF01113 DapB_N [H]

EC number: =1.3.1.26 [H]

Molecular weight: Translated: 31198; Mature: 31067

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: PS01298 DAPB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGPFSPGQCHRLCRGAVKRRPATRRTRKIVSQLRIVISGAGGRMGRALIKAISETEGLAL
CCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHCCCCEEE
VGALEYSGSSFLGEDAGAMSGLKPNGVTVESDAAPTLNGADVVVDFSTPSASVRLAETLA
EEEEEECCCCCCCCCCHHCCCCCCCCEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHH
GAGIAHVIGTTGFSNEDNAAIAAAARRTPIMKSGNMSLGVNLLAALTRRVAATLDDSFDI
CCCHHHHHCCCCCCCCCCCCEEHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHCCCCCCE
EIVEMHHNKKVDAPSGTALLLGEAAAQGRGRHLDECSERGRDGVTGARKPGAIGFASLRG
EEEEECCCCCCCCCCCCEEEEECHHHCCCCCCHHHHHHCCCCCCCCCCCCCCEEEEECCC
GSVVGEHMVIFAGQAERIELVHKAEDRMIFARGALTAARWLKGREPGLYSMADVLGLGDF
CCEECCEEEEEECCHHHHHHHHHCCCCEEEEHHHHHHHHHHCCCCCCHHHHHHHHCCCCC
>Mature Secondary Structure 
GPFSPGQCHRLCRGAVKRRPATRRTRKIVSQLRIVISGAGGRMGRALIKAISETEGLAL
CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHCCCCEEE
VGALEYSGSSFLGEDAGAMSGLKPNGVTVESDAAPTLNGADVVVDFSTPSASVRLAETLA
EEEEEECCCCCCCCCCHHCCCCCCCCEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHH
GAGIAHVIGTTGFSNEDNAAIAAAARRTPIMKSGNMSLGVNLLAALTRRVAATLDDSFDI
CCCHHHHHCCCCCCCCCCCCEEHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHCCCCCCE
EIVEMHHNKKVDAPSGTALLLGEAAAQGRGRHLDECSERGRDGVTGARKPGAIGFASLRG
EEEEECCCCCCCCCCCCEEEEECHHHCCCCCCHHHHHHCCCCCCCCCCCCCCEEEEECCC
GSVVGEHMVIFAGQAERIELVHKAEDRMIFARGALTAARWLKGREPGLYSMADVLGLGDF
CCEECCEEEEEECCHHHHHHHHHCCCCEEEEHHHHHHHHHHCCCCCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA