The gene/protein map for NC_009720 is currently unavailable.
Definition Xanthobacter autotrophicus Py2 chromosome, complete genome.
Accession NC_009720
Length 5,308,934

Click here to switch to the map view.

The map label for this gene is uidR [C]

Identifier: 154244311

GI number: 154244311

Start: 368620

End: 369264

Strand: Direct

Name: uidR [C]

Synonym: Xaut_0354

Alternate gene names: 154244311

Gene position: 368620-369264 (Clockwise)

Preceding gene: 154244309

Following gene: 154244312

Centisome position: 6.94

GC content: 69.3

Gene sequence:

>645_bases
TTGCCGTCCGCGCCCCGTGCCCGCCGCAAGGAAGACGCCCGCGCCCGCATCCTCGACGAGGCACGGCGCATCGTGCTGGA
GCACGGCTTCGAGGCCCTCACGATGCGCCGCATCGCCGAAGCGGCAGGCTATTCACCCGCCGCCCTCTATCTCCATTTCG
CGAATCGGGATGCCATCGCCCGCGAGCTCGGGGAGAGCGGCATGCGCAGCCTGCTTGTCGCCTTGACCCAGGCTGCCGCG
GATCCCGATCCGGTGGCGCGCCTCGGGGCGCTGGCTTTGGCCTATGTCGCTTTTGCTCGGAGTGATCCGGAGACCTACCG
CCTGATCTTCATGGAACCCGGCTTCGCCGCCAGCGCCCTTGGCGGCAAGGACGAGGCGGGGGCTGCGGCATTTCAACTTC
TCGCCGGCAGCTTCGAGGACCTCCACAGGGCCGGCCGGCTCAGGCCGGGGCAGGATCCGGCCGCGCTCGCGCTCACCTTC
TGGATCCTGGTCCACGGGACGGCGAGCCTGAAACTCACCTGCTCTGCCTTTCTTTCGCCATCGGAAGAGGACCTTCTCGC
CGCCGCCCTCGCCGCCCTTCTCAACGGGGTGCTGGAGCCGGATCCGACCGGGCAGAACCCGCCTGGGCGGTCAATCCGTC
GCTGA

Upstream 100 bases:

>100_bases
GCGAGGCGAAGGGGACGGGCATTAGAGTGCTCCTGAACAATGTTCACTGAACATCGTTCATAAACTGAACGACGTTCTTG
TCAACTCCGGAGACGATGGT

Downstream 100 bases:

>100_bases
AACCCCTGGGGCGGGGAGCGCCCTGTCCCATCGGTTGGCATCGCAAGCTGATCGGACGACGCCTCCCCTGGCCGAGTGGC
ACGAACCTTGACCCCGCCTG

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Regulatory Protein TetR; Transcriptional Regulator TetR Family Protein; Transcriptional Regulator Tetr Family; TetR-Family Transcriptional Regulator; Transcriptional Repressor

Number of amino acids: Translated: 214; Mature: 213

Protein sequence:

>214_residues
MPSAPRARRKEDARARILDEARRIVLEHGFEALTMRRIAEAAGYSPAALYLHFANRDAIARELGESGMRSLLVALTQAAA
DPDPVARLGALALAYVAFARSDPETYRLIFMEPGFAASALGGKDEAGAAAFQLLAGSFEDLHRAGRLRPGQDPAALALTF
WILVHGTASLKLTCSAFLSPSEEDLLAAALAALLNGVLEPDPTGQNPPGRSIRR

Sequences:

>Translated_214_residues
MPSAPRARRKEDARARILDEARRIVLEHGFEALTMRRIAEAAGYSPAALYLHFANRDAIARELGESGMRSLLVALTQAAA
DPDPVARLGALALAYVAFARSDPETYRLIFMEPGFAASALGGKDEAGAAAFQLLAGSFEDLHRAGRLRPGQDPAALALTF
WILVHGTASLKLTCSAFLSPSEEDLLAAALAALLNGVLEPDPTGQNPPGRSIRR
>Mature_213_residues
PSAPRARRKEDARARILDEARRIVLEHGFEALTMRRIAEAAGYSPAALYLHFANRDAIARELGESGMRSLLVALTQAAAD
PDPVARLGALALAYVAFARSDPETYRLIFMEPGFAASALGGKDEAGAAAFQLLAGSFEDLHRAGRLRPGQDPAALALTFW
ILVHGTASLKLTCSAFLSPSEEDLLAAALAALLNGVLEPDPTGQNPPGRSIRR

Specific function: Repressor For The Uidrabc (Gusrabc) Operon. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22814; Mature: 22683

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSAPRARRKEDARARILDEARRIVLEHGFEALTMRRIAEAAGYSPAALYLHFANRDAIA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCEEEEEECCHHHHH
RELGESGMRSLLVALTQAAADPDPVARLGALALAYVAFARSDPETYRLIFMEPGFAASAL
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHC
GGKDEAGAAAFQLLAGSFEDLHRAGRLRPGQDPAALALTFWILVHGTASLKLTCSAFLSP
CCCCHHHHHHHHHHHCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEEHHHHCCC
SEEDLLAAALAALLNGVLEPDPTGQNPPGRSIRR
CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PSAPRARRKEDARARILDEARRIVLEHGFEALTMRRIAEAAGYSPAALYLHFANRDAIA
CCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCEEEEEECCHHHHH
RELGESGMRSLLVALTQAAADPDPVARLGALALAYVAFARSDPETYRLIFMEPGFAASAL
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHC
GGKDEAGAAAFQLLAGSFEDLHRAGRLRPGQDPAALALTFWILVHGTASLKLTCSAFLSP
CCCCHHHHHHHHHHHCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEEHHHHCCC
SEEDLLAAALAALLNGVLEPDPTGQNPPGRSIRR
CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA