| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is dnaJ
Identifier: 154244309
GI number: 154244309
Start: 366333
End: 367472
Strand: Direct
Name: dnaJ
Synonym: Xaut_0352
Alternate gene names: 154244309
Gene position: 366333-367472 (Clockwise)
Preceding gene: 154244308
Following gene: 154244311
Centisome position: 6.9
GC content: 67.02
Gene sequence:
>1140_bases ATGGCCAAGCGCGATTATTACGAAACCCTCGGCTGCGACCGCGGCGCCGATGACACGGTGCTCAAGGCTTCCTATCGCAA GCTCGCCATGAAGTGGCATCCCGACCGCAGCCAGGGCAATGGCGAAGCGGAGGTGATGTTCAAGGAGGTCAACGAGGCCT ACGAGGTCTTGAAGGACCCCCAGAAGCGCGCCGCCTATGACCGCTTCGGCCATGCCGCCTTCGAGAATGGTGGCGGCGGC GGTCCCGGCTTCGGCAATGATTTCGCCTCCTCCTTCGCCGATATCTTCGACGATCTGTTTGGCGGCGCCATGAACCGCGG CCGCGGCGGTGGCCAGCAGCGCGGGCGCGGGGCGGACCTGCGCTACAACATGGAAATCACGCTGGAGGAGGCCTTCTCCG GCAAGACCGCGCAGATCAAGATCCCCACCTCGGTGTCGTGCGAGACCTGCTCGGGCACCGGCGCCAAGCCCGGCACCCAG CCCAAGGCGTGCCGTATGTGCGGCGGCGCCGGCAAGATCCGCCACGCCCAGGGCTTCTTCACCCTGGAGCGAACCTGCCC GAACTGCCAGGGCCGCGGCAGTGTCATCGAGGACCCCTGCAGCGACTGCGGCGGTGCCGGACGGGTGACGCGCGAGCGCA ACCTGTCGGTGCAGATCCCCGCCGGCGTCGAGGACGGCACCCGCATCCGCCTCGGCGGCGAGGGCGAGGCGGGTGTGCGT GGCGGGGCGGCGGGCGACCTCTACATCTTCCTCTCCATCGAGCCCCACACCTTCTTCCAGCGCGAAGGCGCGGACCTCTA CTGCCGGGTGCCCATCTCCATGGTGACGGCGGCGCTGGGGGGCACCGTGGAAGTGCCGACCATCGATGGTGACAAGAGCA AGGTGAAGATCCCCGAGGGCACCCAGTCGCAGAAGCGTTTCCGCCTCTCCGGCAAGGGCATGCCCATCATGCGGGCGCGC AACCACGGCGACATGTATGTGCAGGTGGTGGTGGAAACGCCGCAGAAGCTGACCAAGCGGCAGAAGGAATTGCTCGCCGA ATTCGAAAAGGACAGCTCCGGCGAGACCCATCCCGAATCCACCGGCTTCTTCGCCAAGGTGAAGGAGTTCTTCCAGGGTG CCGCCGGCGAGGGGGCCTGA
Upstream 100 bases:
>100_bases ACCAAATATCGAGAGGTCGTGTCCAGGTGCGAGAGGCAGCCGGGCGTGGTGGTCTTTGACCGGAAGCTGCCGGAAAATTT GAGTGAGGTCTTTTGAGGCG
Downstream 100 bases:
>100_bases GGGGCCTCCCCGCATCTGATCGGCGGGACTGCCTTCACGCGGCCTGCCGGGGCTGCGCCGCTAGCGCTGCCGCAGTCGCG GCCGCCATGGTTCGGGCGAT
Product: chaperone protein DnaJ
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 379; Mature: 378
Protein sequence:
>379_residues MAKRDYYETLGCDRGADDTVLKASYRKLAMKWHPDRSQGNGEAEVMFKEVNEAYEVLKDPQKRAAYDRFGHAAFENGGGG GPGFGNDFASSFADIFDDLFGGAMNRGRGGGQQRGRGADLRYNMEITLEEAFSGKTAQIKIPTSVSCETCSGTGAKPGTQ PKACRMCGGAGKIRHAQGFFTLERTCPNCQGRGSVIEDPCSDCGGAGRVTRERNLSVQIPAGVEDGTRIRLGGEGEAGVR GGAAGDLYIFLSIEPHTFFQREGADLYCRVPISMVTAALGGTVEVPTIDGDKSKVKIPEGTQSQKRFRLSGKGMPIMRAR NHGDMYVQVVVETPQKLTKRQKELLAEFEKDSSGETHPESTGFFAKVKEFFQGAAGEGA
Sequences:
>Translated_379_residues MAKRDYYETLGCDRGADDTVLKASYRKLAMKWHPDRSQGNGEAEVMFKEVNEAYEVLKDPQKRAAYDRFGHAAFENGGGG GPGFGNDFASSFADIFDDLFGGAMNRGRGGGQQRGRGADLRYNMEITLEEAFSGKTAQIKIPTSVSCETCSGTGAKPGTQ PKACRMCGGAGKIRHAQGFFTLERTCPNCQGRGSVIEDPCSDCGGAGRVTRERNLSVQIPAGVEDGTRIRLGGEGEAGVR GGAAGDLYIFLSIEPHTFFQREGADLYCRVPISMVTAALGGTVEVPTIDGDKSKVKIPEGTQSQKRFRLSGKGMPIMRAR NHGDMYVQVVVETPQKLTKRQKELLAEFEKDSSGETHPESTGFFAKVKEFFQGAAGEGA >Mature_378_residues AKRDYYETLGCDRGADDTVLKASYRKLAMKWHPDRSQGNGEAEVMFKEVNEAYEVLKDPQKRAAYDRFGHAAFENGGGGG PGFGNDFASSFADIFDDLFGGAMNRGRGGGQQRGRGADLRYNMEITLEEAFSGKTAQIKIPTSVSCETCSGTGAKPGTQP KACRMCGGAGKIRHAQGFFTLERTCPNCQGRGSVIEDPCSDCGGAGRVTRERNLSVQIPAGVEDGTRIRLGGEGEAGVRG GAAGDLYIFLSIEPHTFFQREGADLYCRVPISMVTAALGGTVEVPTIDGDKSKVKIPEGTQSQKRFRLSGKGMPIMRARN HGDMYVQVVVETPQKLTKRQKELLAEFEKDSSGETHPESTGFFAKVKEFFQGAAGEGA
Specific function: Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion. Unfolded proteins bind initially to dnaJ; upon
COG id: COG0484
COG function: function code O; DnaJ-class molecular chaperone with C-terminal Zn finger domain
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 J domain
Homologues:
Organism=Homo sapiens, GI205360838, Length=361, Percent_Identity=33.5180055401662, Blast_Score=216, Evalue=3e-56, Organism=Homo sapiens, GI205360840, Length=361, Percent_Identity=33.5180055401662, Blast_Score=215, Evalue=4e-56, Organism=Homo sapiens, GI194328760, Length=341, Percent_Identity=33.4310850439883, Blast_Score=160, Evalue=1e-39, Organism=Homo sapiens, GI194328758, Length=341, Percent_Identity=33.4310850439883, Blast_Score=160, Evalue=2e-39, Organism=Homo sapiens, GI4504511, Length=341, Percent_Identity=34.0175953079179, Blast_Score=155, Evalue=6e-38, Organism=Homo sapiens, GI5031741, Length=345, Percent_Identity=33.9130434782609, Blast_Score=152, Evalue=7e-37, Organism=Homo sapiens, GI7706495, Length=362, Percent_Identity=30.1104972375691, Blast_Score=142, Evalue=5e-34, Organism=Homo sapiens, GI194328762, Length=308, Percent_Identity=32.1428571428571, Blast_Score=130, Evalue=2e-30, Organism=Homo sapiens, GI5453690, Length=353, Percent_Identity=27.4787535410765, Blast_Score=121, Evalue=9e-28, Organism=Homo sapiens, GI6631085, Length=352, Percent_Identity=28.4090909090909, Blast_Score=115, Evalue=6e-26, Organism=Homo sapiens, GI39204547, Length=367, Percent_Identity=26.4305177111717, Blast_Score=113, Evalue=3e-25, Organism=Homo sapiens, GI201862587, Length=398, Percent_Identity=26.1306532663317, Blast_Score=112, Evalue=6e-25, Organism=Homo sapiens, GI56549115, Length=398, Percent_Identity=26.1306532663317, Blast_Score=112, Evalue=7e-25, Organism=Homo sapiens, GI201862518, Length=398, Percent_Identity=26.1306532663317, Blast_Score=112, Evalue=8e-25, Organism=Homo sapiens, GI47777312, Length=104, Percent_Identity=50, Blast_Score=94, Evalue=2e-19, Organism=Homo sapiens, GI9558755, Length=100, Percent_Identity=44, Blast_Score=88, Evalue=1e-17, Organism=Homo sapiens, GI27151736, Length=127, Percent_Identity=41.7322834645669, Blast_Score=87, Evalue=3e-17, Organism=Homo sapiens, GI88501736, Length=127, Percent_Identity=41.7322834645669, Blast_Score=86, Evalue=5e-17, Organism=Homo sapiens, GI23503241, Length=104, Percent_Identity=44.2307692307692, Blast_Score=86, Evalue=7e-17, Organism=Homo sapiens, GI194306642, Length=105, Percent_Identity=44.7619047619048, Blast_Score=83, Evalue=5e-16, Organism=Homo sapiens, GI194306640, Length=105, Percent_Identity=44.7619047619048, Blast_Score=83, Evalue=5e-16, Organism=Homo sapiens, GI17388799, Length=104, Percent_Identity=49.0384615384615, Blast_Score=82, Evalue=7e-16, Organism=Homo sapiens, GI4885495, Length=104, Percent_Identity=49.0384615384615, Blast_Score=82, Evalue=1e-15, Organism=Homo sapiens, GI21553335, Length=102, Percent_Identity=44.1176470588235, Blast_Score=78, Evalue=2e-14, Organism=Homo sapiens, GI68077168, Length=76, Percent_Identity=48.6842105263158, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI68077166, Length=76, Percent_Identity=48.6842105263158, Blast_Score=73, Evalue=4e-13, Organism=Homo sapiens, GI45504382, Length=64, Percent_Identity=48.4375, Blast_Score=71, Evalue=2e-12, Organism=Homo sapiens, GI217035105, Length=77, Percent_Identity=45.4545454545455, Blast_Score=71, Evalue=2e-12, Organism=Homo sapiens, GI22749377, Length=108, Percent_Identity=37.037037037037, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI24308127, Length=95, Percent_Identity=36.8421052631579, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI72534740, Length=118, Percent_Identity=35.5932203389831, Blast_Score=69, Evalue=6e-12, Organism=Homo sapiens, GI29126218, Length=64, Percent_Identity=45.3125, Blast_Score=67, Evalue=4e-11, Organism=Escherichia coli, GI1786197, Length=377, Percent_Identity=55.4376657824934, Blast_Score=404, Evalue=1e-114, Organism=Escherichia coli, GI1787235, Length=349, Percent_Identity=31.2320916905444, Blast_Score=147, Evalue=9e-37, Organism=Caenorhabditis elegans, GI17553096, Length=352, Percent_Identity=35.2272727272727, Blast_Score=201, Evalue=5e-52, Organism=Caenorhabditis elegans, GI17553098, Length=352, Percent_Identity=35.2272727272727, Blast_Score=201, Evalue=5e-52, Organism=Caenorhabditis elegans, GI17507263, Length=352, Percent_Identity=32.3863636363636, Blast_Score=140, Evalue=1e-33, Organism=Caenorhabditis elegans, GI212645553, Length=348, Percent_Identity=33.6206896551724, Blast_Score=130, Evalue=1e-30, Organism=Caenorhabditis elegans, GI115532378, Length=95, Percent_Identity=43.1578947368421, Blast_Score=82, Evalue=6e-16, Organism=Caenorhabditis elegans, GI17534355, Length=188, Percent_Identity=31.9148936170213, Blast_Score=78, Evalue=8e-15, Organism=Caenorhabditis elegans, GI17563890, Length=228, Percent_Identity=27.1929824561404, Blast_Score=77, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17538236, Length=113, Percent_Identity=38.9380530973451, Blast_Score=73, Evalue=2e-13, Organism=Caenorhabditis elegans, GI86563276, Length=103, Percent_Identity=40.7766990291262, Blast_Score=73, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17554644, Length=70, Percent_Identity=44.2857142857143, Blast_Score=72, Evalue=5e-13, Organism=Caenorhabditis elegans, GI17554874, Length=92, Percent_Identity=38.0434782608696, Blast_Score=68, Evalue=8e-12, Organism=Saccharomyces cerevisiae, GI6324265, Length=339, Percent_Identity=34.2182890855457, Blast_Score=164, Evalue=2e-41, Organism=Saccharomyces cerevisiae, GI6321094, Length=395, Percent_Identity=33.4177215189873, Blast_Score=149, Evalue=7e-37, Organism=Saccharomyces cerevisiae, GI6323870, Length=360, Percent_Identity=30.5555555555556, Blast_Score=130, Evalue=4e-31, Organism=Saccharomyces cerevisiae, GI6323119, Length=382, Percent_Identity=26.9633507853403, Blast_Score=124, Evalue=2e-29, Organism=Saccharomyces cerevisiae, GI6324321, Length=67, Percent_Identity=47.7611940298507, Blast_Score=70, Evalue=4e-13, Organism=Saccharomyces cerevisiae, GI6323813, Length=123, Percent_Identity=37.3983739837398, Blast_Score=70, Evalue=7e-13, Organism=Saccharomyces cerevisiae, GI6324252, Length=257, Percent_Identity=28.0155642023346, Blast_Score=69, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6324103, Length=63, Percent_Identity=50.7936507936508, Blast_Score=64, Evalue=5e-11, Organism=Drosophila melanogaster, GI45552813, Length=383, Percent_Identity=33.6814621409922, Blast_Score=199, Evalue=2e-51, Organism=Drosophila melanogaster, GI45549272, Length=383, Percent_Identity=33.6814621409922, Blast_Score=199, Evalue=2e-51, Organism=Drosophila melanogaster, GI45552811, Length=383, Percent_Identity=33.6814621409922, Blast_Score=199, Evalue=4e-51, Organism=Drosophila melanogaster, GI20129487, Length=343, Percent_Identity=31.7784256559767, Blast_Score=150, Evalue=1e-36, Organism=Drosophila melanogaster, GI24584014, Length=343, Percent_Identity=31.7784256559767, Blast_Score=150, Evalue=1e-36, Organism=Drosophila melanogaster, GI24646562, Length=343, Percent_Identity=32.6530612244898, Blast_Score=148, Evalue=5e-36, Organism=Drosophila melanogaster, GI24646560, Length=343, Percent_Identity=32.6530612244898, Blast_Score=148, Evalue=5e-36, Organism=Drosophila melanogaster, GI24646558, Length=343, Percent_Identity=32.6530612244898, Blast_Score=148, Evalue=5e-36, Organism=Drosophila melanogaster, GI24646556, Length=343, Percent_Identity=32.6530612244898, Blast_Score=148, Evalue=5e-36, Organism=Drosophila melanogaster, GI21357547, Length=343, Percent_Identity=32.6530612244898, Blast_Score=148, Evalue=5e-36, Organism=Drosophila melanogaster, GI19920464, Length=359, Percent_Identity=30.9192200557103, Blast_Score=142, Evalue=4e-34, Organism=Drosophila melanogaster, GI85726398, Length=364, Percent_Identity=28.2967032967033, Blast_Score=129, Evalue=2e-30, Organism=Drosophila melanogaster, GI28574949, Length=353, Percent_Identity=25.2124645892351, Blast_Score=119, Evalue=5e-27, Organism=Drosophila melanogaster, GI24658562, Length=368, Percent_Identity=27.7173913043478, Blast_Score=111, Evalue=7e-25, Organism=Drosophila melanogaster, GI24658555, Length=368, Percent_Identity=27.7173913043478, Blast_Score=111, Evalue=7e-25, Organism=Drosophila melanogaster, GI18858081, Length=341, Percent_Identity=29.0322580645161, Blast_Score=102, Evalue=5e-22, Organism=Drosophila melanogaster, GI24654066, Length=67, Percent_Identity=52.2388059701493, Blast_Score=78, Evalue=1e-14, Organism=Drosophila melanogaster, GI24654070, Length=67, Percent_Identity=52.2388059701493, Blast_Score=78, Evalue=1e-14, Organism=Drosophila melanogaster, GI24654068, Length=67, Percent_Identity=52.2388059701493, Blast_Score=78, Evalue=1e-14, Organism=Drosophila melanogaster, GI24654072, Length=67, Percent_Identity=52.2388059701493, Blast_Score=78, Evalue=1e-14, Organism=Drosophila melanogaster, GI161077138, Length=64, Percent_Identity=53.125, Blast_Score=75, Evalue=8e-14, Organism=Drosophila melanogaster, GI24762799, Length=109, Percent_Identity=34.8623853211009, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI24651436, Length=65, Percent_Identity=43.0769230769231, Blast_Score=68, Evalue=1e-11, Organism=Drosophila melanogaster, GI21358311, Length=65, Percent_Identity=43.0769230769231, Blast_Score=68, Evalue=1e-11, Organism=Drosophila melanogaster, GI24651439, Length=65, Percent_Identity=43.0769230769231, Blast_Score=68, Evalue=1e-11, Organism=Drosophila melanogaster, GI17737735, Length=64, Percent_Identity=46.875, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI24668523, Length=64, Percent_Identity=46.875, Blast_Score=67, Evalue=3e-11, Organism=Drosophila melanogaster, GI28574723, Length=64, Percent_Identity=46.875, Blast_Score=67, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): DNAJ_XANP2 (A7IC67)
Other databases:
- EMBL: CP000781 - RefSeq: YP_001415267.1 - ProteinModelPortal: A7IC67 - STRING: A7IC67 - GeneID: 5422076 - GenomeReviews: CP000781_GR - KEGG: xau:Xaut_0352 - eggNOG: COG0484 - HOGENOM: HBG635315 - OMA: ETHPEST - ProtClustDB: PRK10767 - BioCyc: XAUT78245:XAUT_0352-MONOMER - GO: GO:0005737 - HAMAP: MF_01152 - InterPro: IPR012724 - InterPro: IPR002939 - InterPro: IPR001623 - InterPro: IPR018253 - InterPro: IPR008971 - InterPro: IPR015609 - InterPro: IPR003095 - InterPro: IPR001305 - Gene3D: G3DSA:1.10.287.110 - Gene3D: G3DSA:2.10.230.10 - PANTHER: PTHR11821 - PRINTS: PR00625 - SMART: SM00271 - TIGRFAMs: TIGR02349
Pfam domain/function: PF00226 DnaJ; PF01556 DnaJ_C; PF00684 DnaJ_CXXCXGXG; SSF46565 DnaJ_N; SSF49493 HSP40_DnaJ_pep; SSF57938 HSP_DnaJ_cys-rich
EC number: NA
Molecular weight: Translated: 40832; Mature: 40701
Theoretical pI: Translated: 7.66; Mature: 7.66
Prosite motif: PS00636 DNAJ_1; PS50076 DNAJ_2; PS51188 ZF_CR; PS00637 DNAJ_CXXCXGXG
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKRDYYETLGCDRGADDTVLKASYRKLAMKWHPDRSQGNGEAEVMFKEVNEAYEVLKDP CCCCHHHHHHCCCCCCCCHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHCH QKRAAYDRFGHAAFENGGGGGPGFGNDFASSFADIFDDLFGGAMNRGRGGGQQRGRGADL HHHHHHHHHCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCE RYNMEITLEEAFSGKTAQIKIPTSVSCETCSGTGAKPGTQPKACRMCGGAGKIRHAQGFF EEEEEEEEEHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCEECCCEE TLERTCPNCQGRGSVIEDPCSDCGGAGRVTRERNLSVQIPAGVEDGTRIRLGGEGEAGVR EEECCCCCCCCCCCCCCCHHHHCCCCCCCEECCCCEEEECCCCCCCCEEEECCCCCCCCC GGAAGDLYIFLSIEPHTFFQREGADLYCRVPISMVTAALGGTVEVPTIDGDKSKVKIPEG CCCCCCEEEEEEECCCHHHHCCCCCEEEECCHHHHHHHHCCEEEEEEECCCCCEEECCCC TQSQKRFRLSGKGMPIMRARNHGDMYVQVVVETPQKLTKRQKELLAEFEKDSSGETHPES CCHHHEEEECCCCCEEEEECCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCC TGFFAKVKEFFQGAAGEGA CCHHHHHHHHHCCCCCCCC >Mature Secondary Structure AKRDYYETLGCDRGADDTVLKASYRKLAMKWHPDRSQGNGEAEVMFKEVNEAYEVLKDP CCCHHHHHHCCCCCCCCHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHCH QKRAAYDRFGHAAFENGGGGGPGFGNDFASSFADIFDDLFGGAMNRGRGGGQQRGRGADL HHHHHHHHHCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCE RYNMEITLEEAFSGKTAQIKIPTSVSCETCSGTGAKPGTQPKACRMCGGAGKIRHAQGFF EEEEEEEEEHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCEECCCEE TLERTCPNCQGRGSVIEDPCSDCGGAGRVTRERNLSVQIPAGVEDGTRIRLGGEGEAGVR EEECCCCCCCCCCCCCCCHHHHCCCCCCCEECCCCEEEECCCCCCCCEEEECCCCCCCCC GGAAGDLYIFLSIEPHTFFQREGADLYCRVPISMVTAALGGTVEVPTIDGDKSKVKIPEG CCCCCCEEEEEEECCCHHHHCCCCCEEEECCHHHHHHHHCCEEEEEEECCCCCEEECCCC TQSQKRFRLSGKGMPIMRARNHGDMYVQVVVETPQKLTKRQKELLAEFEKDSSGETHPES CCHHHEEEECCCCCEEEEECCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCC TGFFAKVKEFFQGAAGEGA CCHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA