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The map label for this gene is yraN [C]

Identifier: 154244296

GI number: 154244296

Start: 352227

End: 352610

Strand: Reverse

Name: yraN [C]

Synonym: Xaut_0339

Alternate gene names: 154244296

Gene position: 352610-352227 (Counterclockwise)

Preceding gene: 154244297

Following gene: 154244295

Centisome position: 6.64

GC content: 72.66

Gene sequence:

>384_bases
ATGACTGACGTTCCCGCCGCGACGCGCCGCCGCCGTGCCGCCCACGACCGGGGTCTCGCCGCCGAGGAGCGCGCGGCGAC
CCTGCTTGGAGCCCATGGCTTCGAGATCCTGGCCCGCCGGGTCCGCACCAAGGCCGGCGAGATCGACCTGATCGCCCGCC
AGGGCGACCTGCTGGTCTTCTGCGAAGTGAAGCTGCGGAGCACCCTTTCGGATGCGGCCTTCTCGCTGCTGCCGCGCCAG
CGGCGGCGCATCGCCGCGGCGGCCGAGGCGTTCCTCGCGGGCCATCCGGAGCTGGCGCGCCTCAACATGCGCTTCGATGC
CGTGCTCCTCGCCCGCTCGGGCGCCGCCGAGCATTTGCCCGGAGCATTCGAGGCCGAATTCTGA

Upstream 100 bases:

>100_bases
GCCGTCGCCGCCGTCGCCGCCATGACCGGGCGACCGAAGCGGGAGGTCTATGCCCGCGCCCTTGCCTTGGCCGAAGGACG
GGCCGGGGACAAGGCAGCCG

Downstream 100 bases:

>100_bases
ACGGGGCGCGGGTGGCAGGTTGCCGTGCGCGCCTATAGATAAGGCGAAGCCCCAGCCGGGCGTCCGGAGATTGCCATGGC
CCTCAAGGTCGCGGTCCAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 126

Protein sequence:

>127_residues
MTDVPAATRRRRAAHDRGLAAEERAATLLGAHGFEILARRVRTKAGEIDLIARQGDLLVFCEVKLRSTLSDAAFSLLPRQ
RRRIAAAAEAFLAGHPELARLNMRFDAVLLARSGAAEHLPGAFEAEF

Sequences:

>Translated_127_residues
MTDVPAATRRRRAAHDRGLAAEERAATLLGAHGFEILARRVRTKAGEIDLIARQGDLLVFCEVKLRSTLSDAAFSLLPRQ
RRRIAAAAEAFLAGHPELARLNMRFDAVLLARSGAAEHLPGAFEAEF
>Mature_126_residues
TDVPAATRRRRAAHDRGLAAEERAATLLGAHGFEILARRVRTKAGEIDLIARQGDLLVFCEVKLRSTLSDAAFSLLPRQR
RRIAAAAEAFLAGHPELARLNMRFDAVLLARSGAAEHLPGAFEAEF

Specific function: Unknown

COG id: COG0792

COG function: function code L; Predicted endonuclease distantly related to archaeal Holliday junction resolvase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0102 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011856
- InterPro:   IPR011335
- InterPro:   IPR003509 [H]

Pfam domain/function: PF02021 UPF0102 [H]

EC number: NA

Molecular weight: Translated: 13872; Mature: 13741

Theoretical pI: Translated: 11.09; Mature: 11.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDVPAATRRRRAAHDRGLAAEERAATLLGAHGFEILARRVRTKAGEIDLIARQGDLLVF
CCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEECCCEEEE
CEVKLRSTLSDAAFSLLPRQRRRIAAAAEAFLAGHPELARLNMRFDAVLLARSGAAEHLP
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHEEEEECCCCHHHCC
GAFEAEF
CCCCCCC
>Mature Secondary Structure 
TDVPAATRRRRAAHDRGLAAEERAATLLGAHGFEILARRVRTKAGEIDLIARQGDLLVF
CCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEECCCEEEE
CEVKLRSTLSDAAFSLLPRQRRRIAAAAEAFLAGHPELARLNMRFDAVLLARSGAAEHLP
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHEEEEECCCCHHHCC
GAFEAEF
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA