Click here to switch to the map view.

The map label for this gene is rsmI [H]

Identifier: 154244297

GI number: 154244297

Start: 352603

End: 353565

Strand: Reverse

Name: rsmI [H]

Synonym: Xaut_0340

Alternate gene names: 154244297

Gene position: 353565-352603 (Counterclockwise)

Preceding gene: 154244298

Following gene: 154244296

Centisome position: 6.66

GC content: 72.9

Gene sequence:

>963_bases
ATGACCAGCCCGCACCGCTCGCCTGCCCCTACCCGCCCGGAGCCCTCCGCCGCAGGGGCGGACGCGAACACCTTCCTCCT
CGCCGGCACCCGCGTCTCGGCCCCGGCGCTAGCCCCCGGCCTGCACGTGGTTGCGACACCGATCGGCAACCTCGGCGACG
TAACCGTTCGCGCGCTGGAAACCTTGGCGGGCGCGGACGTCATCGCCTGCGAGGATACCCGCATGTCCCGCCGGCTCACA
GAACGCTACGGCATCACCACGCCGCTCGTGCCCTATCACGACCACAACGGCGCCAGTGCCCGGCCCAAGCTGCTGGCGCG
GCTTGCCGCCGGCCACCGCGTCGCGCTCATCTCGGATGCCGGCACGCCGCTGGTCTCGGACCCCGGCTTCAAGCTGGTGG
TGGAAGCGGCCGAGGCCGGCCACACGGTGCATCCCGTGCCCGGCGCCTCGGCCCTGCTCGCCGCCCTGGTGGCGGCCGGC
CTGCCCACGGACTGCTTTCTGTTCGATGGCTTCCTGCCGCCGAAATCCGGCCAGCGCCGCAACCGCATTACAGCCCTTGC
GAGCGTACCGGCCACGCTGGTGTTCTACGAGACCGGCCCGCGCCTCGCCGAAAGCCTCGCCGACCTCGCCGACCGCCTCG
GCCCGCGCAAGGCCGCGGTCTGCCGCGAGCTCACCAAGGCCTTCGAGGAAGTGCGCCGCGGCGACCTCGCCACCCTCGCC
GCACATTATGGGGCGGCGGAGGCGCCGAGGGGCGAGATCGTGCTGGTGGTAGGACCTCCGCTGGAGGAAGCCGCCGGCGA
CGCCGACGTGGATGAGGCCCTCGCCCGCGCCCTCAAGGACGCCACCTTGAAGGACGCCGTCGCCGCCGTCGCCGCCATGA
CCGGGCGACCGAAGCGGGAGGTCTATGCCCGCGCCCTTGCCTTGGCCGAAGGACGGGCCGGGGACAAGGCAGCCGATGAC
TGA

Upstream 100 bases:

>100_bases
CCGCCCGTCGGATGGGGTGAGGGCGGGCGCCCGGTCTCTTCAGTCACACCCGCCCCGCGTCCCGGTTTTCGTCCCGCGCG
AGCGGGGCTATGGTGGCGCC

Downstream 100 bases:

>100_bases
CGTTCCCGCCGCGACGCGCCGCCGCCGTGCCGCCCACGACCGGGGTCTCGCCGCCGAGGAGCGCGCGGCGACCCTGCTTG
GAGCCCATGGCTTCGAGATC

Product: uroporphyrin-III C/tetrapyrrole methyltransferase

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 320; Mature: 319

Protein sequence:

>320_residues
MTSPHRSPAPTRPEPSAAGADANTFLLAGTRVSAPALAPGLHVVATPIGNLGDVTVRALETLAGADVIACEDTRMSRRLT
ERYGITTPLVPYHDHNGASARPKLLARLAAGHRVALISDAGTPLVSDPGFKLVVEAAEAGHTVHPVPGASALLAALVAAG
LPTDCFLFDGFLPPKSGQRRNRITALASVPATLVFYETGPRLAESLADLADRLGPRKAAVCRELTKAFEEVRRGDLATLA
AHYGAAEAPRGEIVLVVGPPLEEAAGDADVDEALARALKDATLKDAVAAVAAMTGRPKREVYARALALAEGRAGDKAADD

Sequences:

>Translated_320_residues
MTSPHRSPAPTRPEPSAAGADANTFLLAGTRVSAPALAPGLHVVATPIGNLGDVTVRALETLAGADVIACEDTRMSRRLT
ERYGITTPLVPYHDHNGASARPKLLARLAAGHRVALISDAGTPLVSDPGFKLVVEAAEAGHTVHPVPGASALLAALVAAG
LPTDCFLFDGFLPPKSGQRRNRITALASVPATLVFYETGPRLAESLADLADRLGPRKAAVCRELTKAFEEVRRGDLATLA
AHYGAAEAPRGEIVLVVGPPLEEAAGDADVDEALARALKDATLKDAVAAVAAMTGRPKREVYARALALAEGRAGDKAADD
>Mature_319_residues
TSPHRSPAPTRPEPSAAGADANTFLLAGTRVSAPALAPGLHVVATPIGNLGDVTVRALETLAGADVIACEDTRMSRRLTE
RYGITTPLVPYHDHNGASARPKLLARLAAGHRVALISDAGTPLVSDPGFKLVVEAAEAGHTVHPVPGASALLAALVAAGL
PTDCFLFDGFLPPKSGQRRNRITALASVPATLVFYETGPRLAESLADLADRLGPRKAAVCRELTKAFEEVRRGDLATLAA
HYGAAEAPRGEIVLVVGPPLEEAAGDADVDEALARALKDATLKDAVAAVAAMTGRPKREVYARALALAEGRAGDKAADD

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=219, Percent_Identity=47.4885844748858, Blast_Score=190, Evalue=1e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR014776
- InterPro:   IPR008189
- InterPro:   IPR018063 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 33062; Mature: 32931

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: PS01296 UPF0011

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSPHRSPAPTRPEPSAAGADANTFLLAGTRVSAPALAPGLHVVATPIGNLGDVTVRALE
CCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEECCCCCCHHHHHHHHH
TLAGADVIACEDTRMSRRLTERYGITTPLVPYHDHNGASARPKLLARLAAGHRVALISDA
HHCCCCEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECC
GTPLVSDPGFKLVVEAAEAGHTVHPVPGASALLAALVAAGLPTDCFLFDGFLPPKSGQRR
CCCCCCCCCCEEEEEEHHCCCEECCCCCHHHHHHHHHHCCCCCHHEEECCCCCCCCCCCH
NRITALASVPATLVFYETGPRLAESLADLADRLGPRKAAVCRELTKAFEEVRRGDLATLA
HHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHH
AHYGAAEAPRGEIVLVVGPPLEEAAGDADVDEALARALKDATLKDAVAAVAAMTGRPKRE
HHCCCCCCCCCCEEEEECCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
VYARALALAEGRAGDKAADD
HHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
TSPHRSPAPTRPEPSAAGADANTFLLAGTRVSAPALAPGLHVVATPIGNLGDVTVRALE
CCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEECCCCCCHHHHHHHHH
TLAGADVIACEDTRMSRRLTERYGITTPLVPYHDHNGASARPKLLARLAAGHRVALISDA
HHCCCCEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECC
GTPLVSDPGFKLVVEAAEAGHTVHPVPGASALLAALVAAGLPTDCFLFDGFLPPKSGQRR
CCCCCCCCCCEEEEEEHHCCCEECCCCCHHHHHHHHHHCCCCCHHEEECCCCCCCCCCCH
NRITALASVPATLVFYETGPRLAESLADLADRLGPRKAAVCRELTKAFEEVRRGDLATLA
HHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHH
AHYGAAEAPRGEIVLVVGPPLEEAAGDADVDEALARALKDATLKDAVAAVAAMTGRPKRE
HHCCCCCCCCCCEEEEECCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
VYARALALAEGRAGDKAADD
HHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11214968 [H]