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The map label for this gene is regA [H]

Identifier: 154244263

GI number: 154244263

Start: 314430

End: 314984

Strand: Direct

Name: regA [H]

Synonym: Xaut_0306

Alternate gene names: 154244263

Gene position: 314430-314984 (Clockwise)

Preceding gene: 154244262

Following gene: 154244266

Centisome position: 5.92

GC content: 71.35

Gene sequence:

>555_bases
ATGAATGAGACGACGCCGCCCGACGTAGGGGAAGACCGGTCGGTTCTGATCGTGGACGACGACCGTTCCTTCCTGCAGCG
CCTCGCGCGGGCCATGGAAGCGCGCGGCTTCGAGGTGGCCACGGCGGAGACGGTGGCCGACGGCCTCGCCCGCGTGGAGG
CCTCGGCTCCCGCCTATGCGGTGGTGGACATGCGCCTCGGCGACGGCACCGGGCTCGACGTGATCTCGGCGCTCAAGCGG
CACCGGCCCGGCGCGCGGGCCATCGTGCTCACCGGCTACGGCAACATCGCCACCGCCGTGACGGCGGTGAAGCTCGGCGC
GGTGGACTATCTGGCCAAGCCCGCCGATGCCGACGACGTGGTGGCCGCGCTGCTCGCCAACGCCGACCACAAGCCGATCC
CGCCGGAAAATCCCATGTCCGCCGACCGGGTGCGGTGGGAGCATATCCAGCGCGTCTACGAATTGTGCGGCCGCAACGTC
TCCGAGACCGCCCGCCGCCTCTCCATGCACCGCCGCACGCTCCAGCGCATCCTGGCCAAGCGCGCGCCGCGTTAG

Upstream 100 bases:

>100_bases
GGACGCGGATCAGATTAATCTACCGGGCAGGCGGCGTAGAAAGCCGCAGCCAGTTCTGTTCGTAACCGGCCCTGCCGGAA
CTGGATTTGAGGAAGACGTT

Downstream 100 bases:

>100_bases
GGCAGGGTGGGGGCTGGGACCCCTCCGCTAAACCGGCGCTGGTGTTCATGCCCCGGCGCTTTGCCCCCTCCCCAATCCTC
CCCGCAGGCGGGCGAGGGGG

Product: two component Fis family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MNETTPPDVGEDRSVLIVDDDRSFLQRLARAMEARGFEVATAETVADGLARVEASAPAYAVVDMRLGDGTGLDVISALKR
HRPGARAIVLTGYGNIATAVTAVKLGAVDYLAKPADADDVVAALLANADHKPIPPENPMSADRVRWEHIQRVYELCGRNV
SETARRLSMHRRTLQRILAKRAPR

Sequences:

>Translated_184_residues
MNETTPPDVGEDRSVLIVDDDRSFLQRLARAMEARGFEVATAETVADGLARVEASAPAYAVVDMRLGDGTGLDVISALKR
HRPGARAIVLTGYGNIATAVTAVKLGAVDYLAKPADADDVVAALLANADHKPIPPENPMSADRVRWEHIQRVYELCGRNV
SETARRLSMHRRTLQRILAKRAPR
>Mature_184_residues
MNETTPPDVGEDRSVLIVDDDRSFLQRLARAMEARGFEVATAETVADGLARVEASAPAYAVVDMRLGDGTGLDVISALKR
HRPGARAIVLTGYGNIATAVTAVKLGAVDYLAKPADADDVVAALLANADHKPIPPENPMSADRVRWEHIQRVYELCGRNV
SETARRLSMHRRTLQRILAKRAPR

Specific function: Member of the two-component regulatory system regB/regA. Involved in transactivating anaerobic expression of the photosynthetic apparatus. It is a transcriptional regulator that is responsible for activating expression of the puf, puh, and puc operons in

COG id: COG4567

COG function: function code TK; Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1790437, Length=110, Percent_Identity=32.7272727272727, Blast_Score=67, Evalue=7e-13,
Organism=Escherichia coli, GI1790299, Length=108, Percent_Identity=34.2592592592593, Blast_Score=66, Evalue=1e-12,
Organism=Escherichia coli, GI1788905, Length=110, Percent_Identity=31.8181818181818, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI1788550, Length=139, Percent_Identity=28.7769784172662, Blast_Score=64, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 20020; Mature: 20020

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNETTPPDVGEDRSVLIVDDDRSFLQRLARAMEARGFEVATAETVADGLARVEASAPAYA
CCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEE
VVDMRLGDGTGLDVISALKRHRPGARAIVLTGYGNIATAVTAVKLGAVDYLAKPADADDV
EEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHH
VAALLANADHKPIPPENPMSADRVRWEHIQRVYELCGRNVSETARRLSMHRRTLQRILAK
HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
RAPR
CCCC
>Mature Secondary Structure
MNETTPPDVGEDRSVLIVDDDRSFLQRLARAMEARGFEVATAETVADGLARVEASAPAYA
CCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEE
VVDMRLGDGTGLDVISALKRHRPGARAIVLTGYGNIATAVTAVKLGAVDYLAKPADADDV
EEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHH
VAALLANADHKPIPPENPMSADRVRWEHIQRVYELCGRNVSETARRLSMHRRTLQRILAK
HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
RAPR
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1547494 [H]