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The map label for this gene is rimP

Identifier: 154244253

GI number: 154244253

Start: 303992

End: 304852

Strand: Reverse

Name: rimP

Synonym: Xaut_0296

Alternate gene names: 154244253

Gene position: 304852-303992 (Counterclockwise)

Preceding gene: 154244254

Following gene: 154244252

Centisome position: 5.74

GC content: 70.96

Gene sequence:

>861_bases
ATGACCGAGATCCAAGCCGTGCTCGACGATCCCAACGAGCCGCGCCTCATCACCGAAACCGGGGTGGCCGCCCGCGTGGC
CGCCATCGCCTCCGGCGTGCTCGGCGCGCTCGGCTACCGGCTTGTCCGCGTGAAGGTGACGAACCGCGACGGCGGCACGC
TGCAGATCATGGCCGAGCGTCCCGACGGCACCATGAGCATCGACGATTGCGAGGCCGCCTCGCGCGCCCTGTCTCCGGTG
CTCGACGTGGAAGACCCCATCTCCAGCGCCTACCGCCTTGAGATGTCCTCCCCCGGCATCGACCGCCCGCTGGTGCGCCA
GTCGGACTTCGTCCGCTGGGCCGGCCATGAGGTGAAGGTGGAGATGGCCCGTCCCGTGGACGGCCGCAAGCGCTTCCGCG
GCATCCTGATCGGCGCCGAAGACGGCATCGCCGTGGTCCGCCGCCTCGATGCGCCGGCGACCGAGGAGCCCACCGTGCGC
CTGCCGGTGGCCGACATCCACGACGCCAAGCTCATGCTCACCGACGCCCTCATCCGCGAGGCCCTGCGCGCCGCCAAGGC
TGCCGGCCAGGCCATCGACGAGGAGGCGGAAGCCTTCCTCGACGGCGAGGACGGGGACGACACCGGCGTGGACGCCGGTG
ATCCGGACCAGGATGACGCCGACGACGCCCTCGCCGAGGCCACCGCCCAGCCGGCGGCGCCCTACAAGGGCCCCTCGCGC
AAGGACGGCGGCAACAAGCTCGTGGGCCGCAAGGCCAAGGGCAAGAAGGCTTCGCCCAAGAAATCCAACGCCAAGAAGAA
GGCCGGCCTGGAAACGGCCGCGTCCTCGGCCAACGCCAGCACCGTGAAGGAGACGCACTGA

Upstream 100 bases:

>100_bases
CGGGTCGGCTTCGCCTCTCGCGCACTATCCGGGCGCCGGTGCCGAACCGCCGCGTGCCCACCGGCCGAGACCGGCCGCAG
TTCAGCTGTCCTGGAGGGAC

Downstream 100 bases:

>100_bases
TGGTTGCCGTCAGCGCAAACCGGCTGGAACTGCTGCAGATCGCCGATGCGGTCGCGCGGGAAAAGTCCATCGACCGCAGC
ATCGTGATTGCCGCCATGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 285

Protein sequence:

>286_residues
MTEIQAVLDDPNEPRLITETGVAARVAAIASGVLGALGYRLVRVKVTNRDGGTLQIMAERPDGTMSIDDCEAASRALSPV
LDVEDPISSAYRLEMSSPGIDRPLVRQSDFVRWAGHEVKVEMARPVDGRKRFRGILIGAEDGIAVVRRLDAPATEEPTVR
LPVADIHDAKLMLTDALIREALRAAKAAGQAIDEEAEAFLDGEDGDDTGVDAGDPDQDDADDALAEATAQPAAPYKGPSR
KDGGNKLVGRKAKGKKASPKKSNAKKKAGLETAASSANASTVKETH

Sequences:

>Translated_286_residues
MTEIQAVLDDPNEPRLITETGVAARVAAIASGVLGALGYRLVRVKVTNRDGGTLQIMAERPDGTMSIDDCEAASRALSPV
LDVEDPISSAYRLEMSSPGIDRPLVRQSDFVRWAGHEVKVEMARPVDGRKRFRGILIGAEDGIAVVRRLDAPATEEPTVR
LPVADIHDAKLMLTDALIREALRAAKAAGQAIDEEAEAFLDGEDGDDTGVDAGDPDQDDADDALAEATAQPAAPYKGPSR
KDGGNKLVGRKAKGKKASPKKSNAKKKAGLETAASSANASTVKETH
>Mature_285_residues
TEIQAVLDDPNEPRLITETGVAARVAAIASGVLGALGYRLVRVKVTNRDGGTLQIMAERPDGTMSIDDCEAASRALSPVL
DVEDPISSAYRLEMSSPGIDRPLVRQSDFVRWAGHEVKVEMARPVDGRKRFRGILIGAEDGIAVVRRLDAPATEEPTVRL
PVADIHDAKLMLTDALIREALRAAKAAGQAIDEEAEAFLDGEDGDDTGVDAGDPDQDDADDALAEATAQPAAPYKGPSRK
DGGNKLVGRKAKGKKASPKKSNAKKKAGLETAASSANASTVKETH

Specific function: Required for maturation of 30S ribosomal subunits

COG id: COG0779

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rimP family

Homologues:

Organism=Escherichia coli, GI226510978, Length=107, Percent_Identity=42.9906542056075, Blast_Score=89, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RIMP_XANP2 (A7IC11)

Other databases:

- EMBL:   CP000781
- RefSeq:   YP_001415211.1
- ProteinModelPortal:   A7IC11
- SMR:   A7IC11
- STRING:   A7IC11
- GeneID:   5424182
- GenomeReviews:   CP000781_GR
- KEGG:   xau:Xaut_0296
- eggNOG:   COG0779
- HOGENOM:   HBG668072
- OMA:   NPISARA
- ProtClustDB:   CLSK979196
- BioCyc:   XAUT78245:XAUT_0296-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01077
- InterPro:   IPR003728

Pfam domain/function: PF02576 DUF150

EC number: NA

Molecular weight: Translated: 30212; Mature: 30081

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEIQAVLDDPNEPRLITETGVAARVAAIASGVLGALGYRLVRVKVTNRDGGTLQIMAER
CCCCEEECCCCCCCEEEECCCHHHHHHHHHHHHHHHHCEEEEEEEEECCCCCEEEEEEEC
PDGTMSIDDCEAASRALSPVLDVEDPISSAYRLEMSSPGIDRPLVRQSDFVRWAGHEVKV
CCCCCCCHHHHHHHHHHCCCCCCCCHHCCEEEEECCCCCCCCCCCCCCCCEEECCCEEEE
EMARPVDGRKRFRGILIGAEDGIAVVRRLDAPATEEPTVRLPVADIHDAKLMLTDALIRE
EECCCCCHHHHHCEEEEECCCCHHHHHHCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHH
ALRAAKAAGQAIDEEAEAFLDGEDGDDTGVDAGDPDQDDADDALAEATAQPAAPYKGPSR
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCC
KDGGNKLVGRKAKGKKASPKKSNAKKKAGLETAASSANASTVKETH
CCCCCCCCCCCCCCCCCCCCCCCHHHHHCHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
TEIQAVLDDPNEPRLITETGVAARVAAIASGVLGALGYRLVRVKVTNRDGGTLQIMAER
CCCEEECCCCCCCEEEECCCHHHHHHHHHHHHHHHHCEEEEEEEEECCCCCEEEEEEEC
PDGTMSIDDCEAASRALSPVLDVEDPISSAYRLEMSSPGIDRPLVRQSDFVRWAGHEVKV
CCCCCCCHHHHHHHHHHCCCCCCCCHHCCEEEEECCCCCCCCCCCCCCCCEEECCCEEEE
EMARPVDGRKRFRGILIGAEDGIAVVRRLDAPATEEPTVRLPVADIHDAKLMLTDALIRE
EECCCCCHHHHHCEEEEECCCCHHHHHHCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHH
ALRAAKAAGQAIDEEAEAFLDGEDGDDTGVDAGDPDQDDADDALAEATAQPAAPYKGPSR
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCC
KDGGNKLVGRKAKGKKASPKKSNAKKKAGLETAASSANASTVKETH
CCCCCCCCCCCCCCCCCCCCCCCHHHHHCHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA