| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153950738
Identifier: 153950738
GI number: 153950738
Start: 686324
End: 686872
Strand: Reverse
Name: 153950738
Synonym: YpsIP31758_0584
Alternate gene names: NA
Gene position: 686872-686324 (Counterclockwise)
Preceding gene: 153949934
Following gene: 153949393
Centisome position: 14.54
GC content: 29.14
Gene sequence:
>549_bases ATGAAACCATTAAAAAACACATTTATCTTCTGTGCCATTCTTATTTTTTCTTTGAATAATAGCCTTGCCAATCAAAATAT TATAAACGAAGCAAACATCCTAATGAAAAAAGCCGTAATGGCTGATAACAAAGAAGAGTTAAATTTATACTTACATGAGA TTAAAGAGTTAACGATAAAAAACCAAGACAATGAAACTCTCAACAATATGTATGCCAATATACTCACATCAACAGGAAAA TATAAAGAAGCTTACATTGAATACAAGAAAATTAACGAGAAAAAAGAAAATCCAAGTGTAAAATCATTAGAATGCATGTT GCAAGAAAAAATAGATAGAAAGTATTTACCTTGTTATCAGGATGCTATTTCGCTTTATGAGAAAAATAACATCACGGACA TAAACTATGTTATAGCCTTGATCTTGGGTGAAGATAAAAGAGCAAATGATAAAAAAGTATCTTATCTAAAAGAAAATAAA GTTGATGAACTGGAAGAGTATACCCTCTCTATCAGCAGAGATGCATATATTCGTTTAATTCTCCCATAA
Upstream 100 bases:
>100_bases ATAAGTAACCATATGAAGACTATTCTAGTGGTGCGACCCCTATGCCTAAGAGCACTAAAAAAGAAATAAAGCTGACCCCA TTCAGACCAGAGATTAAAAA
Downstream 100 bases:
>100_bases GTTAATTTTATTTTTTTGTTAACGGCGATTAGATACCGCCCCAAATAGAGATGATAGCAGGTTGATTATCAGGCGAAAGC CAAAAAGGATGGCTTTGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 182; Mature: 182
Protein sequence:
>182_residues MKPLKNTFIFCAILIFSLNNSLANQNIINEANILMKKAVMADNKEELNLYLHEIKELTIKNQDNETLNNMYANILTSTGK YKEAYIEYKKINEKKENPSVKSLECMLQEKIDRKYLPCYQDAISLYEKNNITDINYVIALILGEDKRANDKKVSYLKENK VDELEEYTLSISRDAYIRLILP
Sequences:
>Translated_182_residues MKPLKNTFIFCAILIFSLNNSLANQNIINEANILMKKAVMADNKEELNLYLHEIKELTIKNQDNETLNNMYANILTSTGK YKEAYIEYKKINEKKENPSVKSLECMLQEKIDRKYLPCYQDAISLYEKNNITDINYVIALILGEDKRANDKKVSYLKENK VDELEEYTLSISRDAYIRLILP >Mature_182_residues MKPLKNTFIFCAILIFSLNNSLANQNIINEANILMKKAVMADNKEELNLYLHEIKELTIKNQDNETLNNMYANILTSTGK YKEAYIEYKKINEKKENPSVKSLECMLQEKIDRKYLPCYQDAISLYEKNNITDINYVIALILGEDKRANDKKVSYLKENK VDELEEYTLSISRDAYIRLILP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21258; Mature: 21258
Theoretical pI: Translated: 6.04; Mature: 6.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPLKNTFIFCAILIFSLNNSLANQNIINEANILMKKAVMADNKEELNLYLHEIKELTIK CCCHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC NQDNETLNNMYANILTSTGKYKEAYIEYKKINEKKENPSVKSLECMLQEKIDRKYLPCYQ CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCHHH DAISLYEKNNITDINYVIALILGEDKRANDKKVSYLKENKVDELEEYTLSISRDAYIRLI HHHHHHHCCCCCHHHHEEEEEECCCCCCCCHHHHHHHHCCHHHHHHHHHEECCCEEEEEE LP CC >Mature Secondary Structure MKPLKNTFIFCAILIFSLNNSLANQNIINEANILMKKAVMADNKEELNLYLHEIKELTIK CCCHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC NQDNETLNNMYANILTSTGKYKEAYIEYKKINEKKENPSVKSLECMLQEKIDRKYLPCYQ CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCHHH DAISLYEKNNITDINYVIALILGEDKRANDKKVSYLKENKVDELEEYTLSISRDAYIRLI HHHHHHHCCCCCHHHHEEEEEECCCCCCCCHHHHHHHHCCHHHHHHHHHEECCCEEEEEE LP CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA