| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153950625
Identifier: 153950625
GI number: 153950625
Start: 4170053
End: 4170577
Strand: Direct
Name: 153950625
Synonym: YpsIP31758_3696
Alternate gene names: NA
Gene position: 4170053-4170577 (Clockwise)
Preceding gene: 153948105
Following gene: 153949915
Centisome position: 88.29
GC content: 38.86
Gene sequence:
>525_bases ATGCGTTTTTATGATATTTCTAGCAGTAATGGCATATGGAAAAACATAAATCTGAATGAGGTGAATTCACTTTTTAGAGT TTTTGTTGCCAGTCGGGTAGTTTTACCTAATCTTGTAGCCGAGAAGATAAAAGACGACACTGTAATTCCTAAAATTACAC CTTATGAGCGATACTGGATCAAATCGTATACACTTACTATGGATAGGGAACATTACCAAGGAGATAGATTTAGTTTCCCT TTTCTTGGTGGAAAAATAATAGATCTTGGCCCTGATGGGAATGTTAGTGTAACTCAGGCTCCGATAATAAAAGAAGATTT AGCTCTTCCCCAAGATCGTGAGTTAATCGAAAAATATGAACTCACTAATATGTGGGGGCATGAAGATCTCAGCGACCGTT TGTGCCGCTATTTTGATACCGGTATTAATCGAGATGATCTTAAATTCGAAGTATTTCCCGGTCTATGGGATGATCGCGAG AAACTGCGTCCGTTGACGCGTCGATTGCCTGTTCCATTACGATAA
Upstream 100 bases:
>100_bases ATAAATGACTAAACGAATTGTTTGGAAAGAGAACGACTTAGTTAGCATAAAGCTACGTGATGATCTTTATACCATAGCTC AAATGTTAAACCGACCAGAA
Downstream 100 bases:
>100_bases AAAAATCGGAAAGGTTATATATAATCTTTCCGACTTTTGTTGTTATAGACCCGTAATCATTGAAGATTGAATGTCTCCAC GGAGAACGCTTTATCAACCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 174; Mature: 174
Protein sequence:
>174_residues MRFYDISSSNGIWKNINLNEVNSLFRVFVASRVVLPNLVAEKIKDDTVIPKITPYERYWIKSYTLTMDREHYQGDRFSFP FLGGKIIDLGPDGNVSVTQAPIIKEDLALPQDRELIEKYELTNMWGHEDLSDRLCRYFDTGINRDDLKFEVFPGLWDDRE KLRPLTRRLPVPLR
Sequences:
>Translated_174_residues MRFYDISSSNGIWKNINLNEVNSLFRVFVASRVVLPNLVAEKIKDDTVIPKITPYERYWIKSYTLTMDREHYQGDRFSFP FLGGKIIDLGPDGNVSVTQAPIIKEDLALPQDRELIEKYELTNMWGHEDLSDRLCRYFDTGINRDDLKFEVFPGLWDDRE KLRPLTRRLPVPLR >Mature_174_residues MRFYDISSSNGIWKNINLNEVNSLFRVFVASRVVLPNLVAEKIKDDTVIPKITPYERYWIKSYTLTMDREHYQGDRFSFP FLGGKIIDLGPDGNVSVTQAPIIKEDLALPQDRELIEKYELTNMWGHEDLSDRLCRYFDTGINRDDLKFEVFPGLWDDRE KLRPLTRRLPVPLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20469; Mature: 20469
Theoretical pI: Translated: 5.85; Mature: 5.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFYDISSSNGIWKNINLNEVNSLFRVFVASRVVLPNLVAEKIKDDTVIPKITPYERYWI CEEEECCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHEEE KSYTLTMDREHYQGDRFSFPFLGGKIIDLGPDGNVSVTQAPIIKEDLALPQDRELIEKYE EEEEEEECHHHCCCCCEECCCCCCEEEEECCCCCEEEEECCCHHHHHCCCCCHHHHHHHH LTNMWGHEDLSDRLCRYFDTGINRDDLKFEVFPGLWDDREKLRPLTRRLPVPLR HHCCCCCCCHHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCCC >Mature Secondary Structure MRFYDISSSNGIWKNINLNEVNSLFRVFVASRVVLPNLVAEKIKDDTVIPKITPYERYWI CEEEECCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHEEE KSYTLTMDREHYQGDRFSFPFLGGKIIDLGPDGNVSVTQAPIIKEDLALPQDRELIEKYE EEEEEEECHHHCCCCCEECCCCCCEEEEECCCCCEEEEECCCHHHHHCCCCCHHHHHHHH LTNMWGHEDLSDRLCRYFDTGINRDDLKFEVFPGLWDDREKLRPLTRRLPVPLR HHCCCCCCCHHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA