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The map label for this gene is rhsE [H]

Identifier: 153948105

GI number: 153948105

Start: 4169387

End: 4169941

Strand: Direct

Name: rhsE [H]

Synonym: YpsIP31758_3695

Alternate gene names: 153948105

Gene position: 4169387-4169941 (Clockwise)

Preceding gene: 153948822

Following gene: 153950625

Centisome position: 88.27

GC content: 47.39

Gene sequence:

>555_bases
ATGCAGCCATTGCGTTATGCCGGGCAATATCTGGATGACGAAACGGGGTTGCACTACACTACCTACCGGTATTACGCGCC
GGAGGTGGGAAGGTTTATCACACCCGATCCGATTGGCTTGGCGGGGGGACTGAATCTTTATCAGTATGCGCCAAATCCAT
TGGGGTGGATTGATCCATTAGGATTAGCGGGTAATCCTGCAACGGCCACACATATTACCTATCAAGGAATTGATGCTGCT
ACAGGTAAGCCTTATGTTGGGTATGCCAGCATGCAGGGTAATCAAACCGCACAAAGTGTTCTTGATTACCGCTATGGTAA
TGACTATAGCCGTTTTGGTGGAACTCCTCCTGATATTTTATTTGATGGCTATGGGCAAGCAGGTAAGGATACAGCTCGAG
GCTTAGAGCAAAGAGTATTTGAAAATTCAGGTGGTCTTGATGGTACGGCAAATGCGCAAAATCCAGTTGGCAAGGGAAAT
GCCAGACGGGCAGAATATCTAAACGCGGCTGATGAACATCTCAATAATAAAGGACGTGGAGGCGGTAAATGTTAG

Upstream 100 bases:

>100_bases
ATATCCAAAATAATTCGAGTTGCGGGAAGGCGGCAAGCGAGAGAGTCCCGATGAGATTACTGTAGTAAGTGATTCGGGTG
ATTGAGTGTAGCCAACACGC

Downstream 100 bases:

>100_bases
TGACCGTTTATATAAATGACTAAACGAATTGTTTGGAAAGAGAACGACTTAGTTAGCATAAAGCTACGTGATGATCTTTA
TACCATAGCTCAAATGTTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MQPLRYAGQYLDDETGLHYTTYRYYAPEVGRFITPDPIGLAGGLNLYQYAPNPLGWIDPLGLAGNPATATHITYQGIDAA
TGKPYVGYASMQGNQTAQSVLDYRYGNDYSRFGGTPPDILFDGYGQAGKDTARGLEQRVFENSGGLDGTANAQNPVGKGN
ARRAEYLNAADEHLNNKGRGGGKC

Sequences:

>Translated_184_residues
MQPLRYAGQYLDDETGLHYTTYRYYAPEVGRFITPDPIGLAGGLNLYQYAPNPLGWIDPLGLAGNPATATHITYQGIDAA
TGKPYVGYASMQGNQTAQSVLDYRYGNDYSRFGGTPPDILFDGYGQAGKDTARGLEQRVFENSGGLDGTANAQNPVGKGN
ARRAEYLNAADEHLNNKGRGGGKC
>Mature_184_residues
MQPLRYAGQYLDDETGLHYTTYRYYAPEVGRFITPDPIGLAGGLNLYQYAPNPLGWIDPLGLAGNPATATHITYQGIDAA
TGKPYVGYASMQGNQTAQSVLDYRYGNDYSRFGGTPPDILFDGYGQAGKDTARGLEQRVFENSGGLDGTANAQNPVGKGN
ARRAEYLNAADEHLNNKGRGGGKC

Specific function: Rhs elements have a nonessential function. They may play an important role in the natural ecology of the cell [H]

COG id: COG3209

COG function: function code M; Rhs family protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RHS family [H]

Homologues:

Organism=Escherichia coli, GI1786706, Length=61, Percent_Identity=60.655737704918, Blast_Score=77, Evalue=8e-16,
Organism=Escherichia coli, GI1786917, Length=61, Percent_Identity=59.0163934426229, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI48994942, Length=62, Percent_Identity=58.0645161290323, Blast_Score=74, Evalue=7e-15,
Organism=Escherichia coli, GI1790020, Length=65, Percent_Identity=55.3846153846154, Blast_Score=72, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001826
- InterPro:   IPR022385
- InterPro:   IPR006530 [H]

Pfam domain/function: PF03527 RHS; PF05593 RHS_repeat [H]

EC number: NA

Molecular weight: Translated: 19794; Mature: 19794

Theoretical pI: Translated: 5.66; Mature: 5.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPLRYAGQYLDDETGLHYTTYRYYAPEVGRFITPDPIGLAGGLNLYQYAPNPLGWIDPL
CCCHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCC
GLAGNPATATHITYQGIDAATGKPYVGYASMQGNQTAQSVLDYRYGNDYSRFGGTPPDIL
CCCCCCCCEEEEEECCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCHHHCCCCCCCEE
FDGYGQAGKDTARGLEQRVFENSGGLDGTANAQNPVGKGNARRAEYLNAADEHLNNKGRG
ECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCC
GGKC
CCCC
>Mature Secondary Structure
MQPLRYAGQYLDDETGLHYTTYRYYAPEVGRFITPDPIGLAGGLNLYQYAPNPLGWIDPL
CCCHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCC
GLAGNPATATHITYQGIDAATGKPYVGYASMQGNQTAQSVLDYRYGNDYSRFGGTPPDIL
CCCCCCCCEEEEEECCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCHHHCCCCCCCEE
FDGYGQAGKDTARGLEQRVFENSGGLDGTANAQNPVGKGNARRAEYLNAADEHLNNKGRG
ECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCC
GGKC
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503; 1766878; 7934896 [H]