Click here to switch to the map view.

The map label for this gene is 153950598

Identifier: 153950598

GI number: 153950598

Start: 701852

End: 702727

Strand: Reverse

Name: 153950598

Synonym: YpsIP31758_0598

Alternate gene names: NA

Gene position: 702727-701852 (Counterclockwise)

Preceding gene: 153947398

Following gene: 153950588

Centisome position: 14.88

GC content: 33.22

Gene sequence:

>876_bases
ATGATTTATTACGTCGTCGCGTTATCCGGTATTTTATTACTGGTGCTGAATAACCTTAAGTGGATGAAAATAAAGCGCTC
AATAAGCAACACTAAAAAGAGCAAAGCCAAAAGTACATCTTCTATTACTATACTGATAAAAAAAATATTTTTCGAATGGA
TTGATTACGTATCAACCCACAGTAAAAGTACACCTCATATATTATTACCAATATGTTCATTGGTGATAGTCTATTATATA
AACAGCACTTGGATTAATGTTAATTACTCTTTTGTTTTTATTATCAACATCATTTTTATTATCGTTTTACAACTAAAATA
TGCTCGTTCAAAACATTATTTATTATTTAAGCAAGATTTCCCTGAAGTACTATTAATGATTAATATGGCAGCAAGCAGCG
GTGCCAGTATCAATCAAGTATTGGAACGCTGTGGGAAAGAGATTAGAGGCCCCTTGGGACAAGAATTAGGGTTGATCTGT
CGGCGATTAAATCTTGGCGAAACCCCTGAAACCGTTTTTTATGATGCGTATGAGCGGTTCCATTATCCAGAATTTTATTT
CTTAGTGACAATCATACTGCTTAATATTCAGCAAGGAGGCCAATTAAAAGAACTGATTACCCGATTAAGCCAGATAATAA
CAAAGAAAAAAACAACCGAACAAAAGAAGGCCGTCATGACGGCTCAAATAAGAATGTCGGTTAATATTATTTCTATCATG
CCAATATTATTTTCTTTTTTACTTTATCTACTCGACCCCACGACGATAGAGTTTGTATGGCAACATCCCACAGGTAGATT
TATTATCTATTATATTATTATCAGTGAGGTTATTGGCATATTTATTATCAGAAAAATGCTAGGTAAATCCCTATGA

Upstream 100 bases:

>100_bases
TTATCAACCATGGGCTATTTAATCGGTCATCAGTCAGAATAAACGCCGATATCCACAATCTGGCCAATGAGTTAAACAGT
GTTTTCTCTACGGTGAGCAA

Downstream 100 bases:

>100_bases
GAATTATTTTCTTCACGTTATTAATACTATTGGGTTTGATTATCATATTAAAAGTCAACTCACGCTCAAGAAGAATATCA
GTTTATAATAAAATAAATTC

Product: type II secretion system protein F domain

Products: NA

Alternate protein names: Type II Secretion System Protein; Tight Adherence Protein B; Bacterial Type II Secretion System Protein F; MaoC Protein; Flp Pilus Assembly Protein Tadb; Type II Secretion System F Domain Protein; TadB Protein; Tight Adherance Operon Protein B; Tight Adherence TadB-Related Transmembrane Protein; Tight Adherance Operon Protein

Number of amino acids: Translated: 291; Mature: 291

Protein sequence:

>291_residues
MIYYVVALSGILLLVLNNLKWMKIKRSISNTKKSKAKSTSSITILIKKIFFEWIDYVSTHSKSTPHILLPICSLVIVYYI
NSTWINVNYSFVFIINIIFIIVLQLKYARSKHYLLFKQDFPEVLLMINMAASSGASINQVLERCGKEIRGPLGQELGLIC
RRLNLGETPETVFYDAYERFHYPEFYFLVTIILLNIQQGGQLKELITRLSQIITKKKTTEQKKAVMTAQIRMSVNIISIM
PILFSFLLYLLDPTTIEFVWQHPTGRFIIYYIIISEVIGIFIIRKMLGKSL

Sequences:

>Translated_291_residues
MIYYVVALSGILLLVLNNLKWMKIKRSISNTKKSKAKSTSSITILIKKIFFEWIDYVSTHSKSTPHILLPICSLVIVYYI
NSTWINVNYSFVFIINIIFIIVLQLKYARSKHYLLFKQDFPEVLLMINMAASSGASINQVLERCGKEIRGPLGQELGLIC
RRLNLGETPETVFYDAYERFHYPEFYFLVTIILLNIQQGGQLKELITRLSQIITKKKTTEQKKAVMTAQIRMSVNIISIM
PILFSFLLYLLDPTTIEFVWQHPTGRFIIYYIIISEVIGIFIIRKMLGKSL
>Mature_291_residues
MIYYVVALSGILLLVLNNLKWMKIKRSISNTKKSKAKSTSSITILIKKIFFEWIDYVSTHSKSTPHILLPICSLVIVYYI
NSTWINVNYSFVFIINIIFIIVLQLKYARSKHYLLFKQDFPEVLLMINMAASSGASINQVLERCGKEIRGPLGQELGLIC
RRLNLGETPETVFYDAYERFHYPEFYFLVTIILLNIQQGGQLKELITRLSQIITKKKTTEQKKAVMTAQIRMSVNIISIM
PILFSFLLYLLDPTTIEFVWQHPTGRFIIYYIIISEVIGIFIIRKMLGKSL

Specific function: Unknown

COG id: COG4965

COG function: function code U; Flp pilus assembly protein TadB

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33724; Mature: 33724

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIYYVVALSGILLLVLNNLKWMKIKRSISNTKKSKAKSTSSITILIKKIFFEWIDYVSTH
CEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC
SKSTPHILLPICSLVIVYYINSTWINVNYSFVFIINIIFIIVLQLKYARSKHYLLFKQDF
CCCCCCHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCH
PEVLLMINMAASSGASINQVLERCGKEIRGPLGQELGLICRRLNLGETPETVFYDAYERF
HHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHC
HYPEFYFLVTIILLNIQQGGQLKELITRLSQIITKKKTTEQKKAVMTAQIRMSVNIISIM
CCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PILFSFLLYLLDPTTIEFVWQHPTGRFIIYYIIISEVIGIFIIRKMLGKSL
HHHHHHHHHHHCCCEEEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MIYYVVALSGILLLVLNNLKWMKIKRSISNTKKSKAKSTSSITILIKKIFFEWIDYVSTH
CEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC
SKSTPHILLPICSLVIVYYINSTWINVNYSFVFIINIIFIIVLQLKYARSKHYLLFKQDF
CCCCCCHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCH
PEVLLMINMAASSGASINQVLERCGKEIRGPLGQELGLICRRLNLGETPETVFYDAYERF
HHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHC
HYPEFYFLVTIILLNIQQGGQLKELITRLSQIITKKKTTEQKKAVMTAQIRMSVNIISIM
CCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PILFSFLLYLLDPTTIEFVWQHPTGRFIIYYIIISEVIGIFIIRKMLGKSL
HHHHHHHHHHHCCCEEEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA