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The map label for this gene is 153950588

Identifier: 153950588

GI number: 153950588

Start: 701022

End: 701855

Strand: Reverse

Name: 153950588

Synonym: YpsIP31758_0597

Alternate gene names: NA

Gene position: 701855-701022 (Counterclockwise)

Preceding gene: 153950598

Following gene: 153948137

Centisome position: 14.86

GC content: 31.06

Gene sequence:

>834_bases
ATGAGAATTATTTTCTTCACGTTATTAATACTATTGGGTTTGATTATCATATTAAAAGTCAACTCACGCTCAAGAAGAAT
ATCAGTTTATAATAAAATAAATTCGCGTGAAAACAAAAGCAAAGAGGCAAATAATGATACAAAAGATAAACCGACTGTAC
TGTCTGATTTTATAAATCTCCCTGTTGTTTTATCTAACATTTTGTATCTAAAGGTTTTGATTGTTATTTTTATATTATCC
ATCCTTGCAATATTGGCTATTTTTAATGTAGTGAATATCAATCAAAAAACACTACTCACTATTGGGCTACTCTCTATTAT
CTCCACCTTATATTTGCCAAGAATGATAATTAAAAATGCACTCACTAAAAGAACAAATACTTTATTGAAATCTTTACCTT
TCTTTATTGATATTACAGCGGCATGCGTTCAATCTGGCATGACAATAGAGAATTCATTAAATTATACCACACAAAAATTC
CAAACAATAAATACCGACCTATGCTTGATTATGTCAAAAGTGACCAAGCGTGCTGAAATAAATGGTTTAGAAAATGCGAT
TAAAGAACTTCAATATTACTCACCAGCAATAGAAATGAAAATGTTTTGCAGCACACTGCAATACAGTCTTAGTTTTGGCT
CAACGGTGTACGAACAACTGACTCACTTATCACAAGATATGAGAGAAATGCAGCTGCTGATGACAGAAGAGAGCATCAGT
AAATTATCCACAAAACTGACACTGCCATTATTTTTATTTATTTTGATCCCTTTCGTCTTATTGGTTATCTCACCGAGTAT
TCTGGAGCTACTTAACTATGTTAAAAATATTTAA

Upstream 100 bases:

>100_bases
TTGTATGGCAACATCCCACAGGTAGATTTATTATCTATTATATTATTATCAGTGAGGTTATTGGCATATTTATTATCAGA
AAAATGCTAGGTAAATCCCT

Downstream 100 bases:

>100_bases
TACTATTATTATCATCCCAGTGATGCTTTTTCTGTTAAGCGGTTGTTTGAGCCAACAGGGTTTAAGCTCACAAGGTTTAA
GCACAAAAGAATTTTCTTAT

Product: type II secretion system protein

Products: NA

Alternate protein names: Flp Pilus Assembly Protein TadC; Tight Adherence Protein C; TadC Protein; Bacterial Type II Secretion System Protein; Type II Secretion System Protein; Bacterial Type II Secretion System Protein F; Tight Adherance Operon Protein C; Tight Adherance Operon Protein

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MRIIFFTLLILLGLIIILKVNSRSRRISVYNKINSRENKSKEANNDTKDKPTVLSDFINLPVVLSNILYLKVLIVIFILS
ILAILAIFNVVNINQKTLLTIGLLSIISTLYLPRMIIKNALTKRTNTLLKSLPFFIDITAACVQSGMTIENSLNYTTQKF
QTINTDLCLIMSKVTKRAEINGLENAIKELQYYSPAIEMKMFCSTLQYSLSFGSTVYEQLTHLSQDMREMQLLMTEESIS
KLSTKLTLPLFLFILIPFVLLVISPSILELLNYVKNI

Sequences:

>Translated_277_residues
MRIIFFTLLILLGLIIILKVNSRSRRISVYNKINSRENKSKEANNDTKDKPTVLSDFINLPVVLSNILYLKVLIVIFILS
ILAILAIFNVVNINQKTLLTIGLLSIISTLYLPRMIIKNALTKRTNTLLKSLPFFIDITAACVQSGMTIENSLNYTTQKF
QTINTDLCLIMSKVTKRAEINGLENAIKELQYYSPAIEMKMFCSTLQYSLSFGSTVYEQLTHLSQDMREMQLLMTEESIS
KLSTKLTLPLFLFILIPFVLLVISPSILELLNYVKNI
>Mature_277_residues
MRIIFFTLLILLGLIIILKVNSRSRRISVYNKINSRENKSKEANNDTKDKPTVLSDFINLPVVLSNILYLKVLIVIFILS
ILAILAIFNVVNINQKTLLTIGLLSIISTLYLPRMIIKNALTKRTNTLLKSLPFFIDITAACVQSGMTIENSLNYTTQKF
QTINTDLCLIMSKVTKRAEINGLENAIKELQYYSPAIEMKMFCSTLQYSLSFGSTVYEQLTHLSQDMREMQLLMTEESIS
KLSTKLTLPLFLFILIPFVLLVISPSILELLNYVKNI

Specific function: Unknown

COG id: COG2064

COG function: function code NU; Flp pilus assembly protein TadC

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31526; Mature: 31526

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIIFFTLLILLGLIIILKVNSRSRRISVYNKINSRENKSKEANNDTKDKPTVLSDFINL
CHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCHHCCCCCCCCCCCCCHHHHHHHHHH
PVVLSNILYLKVLIVIFILSILAILAIFNVVNINQKTLLTIGLLSIISTLYLPRMIIKNA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LTKRTNTLLKSLPFFIDITAACVQSGMTIENSLNYTTQKFQTINTDLCLIMSKVTKRAEI
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHCHHHHHHHHHHHHHHHH
NGLENAIKELQYYSPAIEMKMFCSTLQYSLSFGSTVYEQLTHLSQDMREMQLLMTEESIS
HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLSTKLTLPLFLFILIPFVLLVISPSILELLNYVKNI
HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCC
>Mature Secondary Structure
MRIIFFTLLILLGLIIILKVNSRSRRISVYNKINSRENKSKEANNDTKDKPTVLSDFINL
CHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCHHCCCCCCCCCCCCCHHHHHHHHHH
PVVLSNILYLKVLIVIFILSILAILAIFNVVNINQKTLLTIGLLSIISTLYLPRMIIKNA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LTKRTNTLLKSLPFFIDITAACVQSGMTIENSLNYTTQKFQTINTDLCLIMSKVTKRAEI
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHCHHHHHHHHHHHHHHHH
NGLENAIKELQYYSPAIEMKMFCSTLQYSLSFGSTVYEQLTHLSQDMREMQLLMTEESIS
HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLSTKLTLPLFLFILIPFVLLVISPSILELLNYVKNI
HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA