| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
Click here to switch to the map view.
The map label for this gene is 153950477
Identifier: 153950477
GI number: 153950477
Start: 3308807
End: 3309634
Strand: Reverse
Name: 153950477
Synonym: YpsIP31758_2932
Alternate gene names: NA
Gene position: 3309634-3308807 (Counterclockwise)
Preceding gene: 153949011
Following gene: 153949901
Centisome position: 70.07
GC content: 36.35
Gene sequence:
>828_bases ATGAGAATTAATTTAACATTTCTATATACATTAATCTTAATTAATAGCGGCGTCGTCGCAGCAGCACAATCCTCACCAAC GTCAGGATCGCCCTACTCTTCACTGGTGGTTTTGATAGCCTTAATTGCTTTGGTGATTTATGTTTTTAGAAAAATAAAAA CAAATAAAAATAAAGATGTTGATTCAAATAAAAAAGGAAAGTTAACAACTGTATTGTTATGGATTCTTTTTGTATTCATG CTTATATTCTCGTTTTCTACCTTCGCAATAGAATCTTATGGCAGAGGCATGATATTCGGGGGTATAGCAGTCGGTCTATT TGTTATTTTAAGAAGAAGTCGTCGAAGAGATAAGGAAGCGCAAGAAAAAAGAGCTAGGCAAGATATCATAACAAAAGAGC AAGTTAATAAAGTTCATGACGGTGAATTACCTACAGCTAATCCAAGAAAAGCCATATTGCGTAATGATGAAATCGCTTAC TTTGCAGAGTTTGCGAAACTCAGAGAGAATAAAACAGTAGGATATTCATCAGGTGGTTCGAGCGTCCGCGTTAGGGTTGC AAAAGGCGTTTCAATTGGTAGCGGGGGCGGACGCTCCAGAGCAATGAAAGAAGATATAATAACTTCCGAAGGTGAGCTTG TTATAACAAACAGAAGGGTTATTTTTGCAGGTAACAACAAAAGTTTTGAGACGCCACTTACTAAGCTAACTAACTACGAA AGTTATTTGGACGGAATTAAATTCCACATGGATTCTAAATCGTATCTTCTTTTAATGGATGAATCTAACGCGGCATTAGC AGACGCAATATTAGATAACATTACTTAA
Upstream 100 bases:
>100_bases GTCGCCACACTGTCAGAAGAAAACATATCAGTTGTGATTAATTTATGATTTACACGCAAAGCAATGTTAAAATTCCCACA CTAATCATGGAGGCATTAGA
Downstream 100 bases:
>100_bases TAAAATAAATGCAATTACTGGCCCACCTTTTTTGGTGGGTTTTTTTATGGACGCAATATATGTCAAAACAAATACCTGAA ATAAATAGCAGTATGGATTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 275; Mature: 275
Protein sequence:
>275_residues MRINLTFLYTLILINSGVVAAAQSSPTSGSPYSSLVVLIALIALVIYVFRKIKTNKNKDVDSNKKGKLTTVLLWILFVFM LIFSFSTFAIESYGRGMIFGGIAVGLFVILRRSRRRDKEAQEKRARQDIITKEQVNKVHDGELPTANPRKAILRNDEIAY FAEFAKLRENKTVGYSSGGSSVRVRVAKGVSIGSGGGRSRAMKEDIITSEGELVITNRRVIFAGNNKSFETPLTKLTNYE SYLDGIKFHMDSKSYLLLMDESNAALADAILDNIT
Sequences:
>Translated_275_residues MRINLTFLYTLILINSGVVAAAQSSPTSGSPYSSLVVLIALIALVIYVFRKIKTNKNKDVDSNKKGKLTTVLLWILFVFM LIFSFSTFAIESYGRGMIFGGIAVGLFVILRRSRRRDKEAQEKRARQDIITKEQVNKVHDGELPTANPRKAILRNDEIAY FAEFAKLRENKTVGYSSGGSSVRVRVAKGVSIGSGGGRSRAMKEDIITSEGELVITNRRVIFAGNNKSFETPLTKLTNYE SYLDGIKFHMDSKSYLLLMDESNAALADAILDNIT >Mature_275_residues MRINLTFLYTLILINSGVVAAAQSSPTSGSPYSSLVVLIALIALVIYVFRKIKTNKNKDVDSNKKGKLTTVLLWILFVFM LIFSFSTFAIESYGRGMIFGGIAVGLFVILRRSRRRDKEAQEKRARQDIITKEQVNKVHDGELPTANPRKAILRNDEIAY FAEFAKLRENKTVGYSSGGSSVRVRVAKGVSIGSGGGRSRAMKEDIITSEGELVITNRRVIFAGNNKSFETPLTKLTNYE SYLDGIKFHMDSKSYLLLMDESNAALADAILDNIT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30520; Mature: 30520
Theoretical pI: Translated: 10.41; Mature: 10.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRINLTFLYTLILINSGVVAAAQSSPTSGSPYSSLVVLIALIALVIYVFRKIKTNKNKDV CEEEHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC DSNKKGKLTTVLLWILFVFMLIFSFSTFAIESYGRGMIFGGIAVGLFVILRRSRRRDKEA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHCCCHHH QEKRARQDIITKEQVNKVHDGELPTANPRKAILRNDEIAYFAEFAKLRENKTVGYSSGGS HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCC SVRVRVAKGVSIGSGGGRSRAMKEDIITSEGELVITNRRVIFAGNNKSFETPLTKLTNYE EEEEEEECCEEECCCCCCCHHHHHHHCCCCCCEEEECCEEEEECCCCCCCCHHHHHHCHH SYLDGIKFHMDSKSYLLLMDESNAALADAILDNIT HHHCCHHEEECCCCEEEEEECCCCHHHHHHHHCCC >Mature Secondary Structure MRINLTFLYTLILINSGVVAAAQSSPTSGSPYSSLVVLIALIALVIYVFRKIKTNKNKDV CEEEHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC DSNKKGKLTTVLLWILFVFMLIFSFSTFAIESYGRGMIFGGIAVGLFVILRRSRRRDKEA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHCCCHHH QEKRARQDIITKEQVNKVHDGELPTANPRKAILRNDEIAYFAEFAKLRENKTVGYSSGGS HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCC SVRVRVAKGVSIGSGGGRSRAMKEDIITSEGELVITNRRVIFAGNNKSFETPLTKLTNYE EEEEEEECCEEECCCCCCCHHHHHHHCCCCCCEEEECCEEEEECCCCCCCCHHHHHHCHH SYLDGIKFHMDSKSYLLLMDESNAALADAILDNIT HHHCCHHEEECCCCEEEEEECCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA