| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153949901
Identifier: 153949901
GI number: 153949901
Start: 3306939
End: 3308798
Strand: Reverse
Name: 153949901
Synonym: YpsIP31758_2931
Alternate gene names: NA
Gene position: 3308798-3306939 (Counterclockwise)
Preceding gene: 153950477
Following gene: 153946983
Centisome position: 70.05
GC content: 40.11
Gene sequence:
>1860_bases ATGCAATTACTGGCCCACCTTTTTTGGTGGGTTTTTTTATGGACGCAATATATGTCAAAACAAATACCTGAAATAAATAG CAGTATGGATTTATTACGTAACATCATTTGGCAATATGACGGTAGCGAAGAAATACAAACGTTAATGCAGAAAAAGGAAG AATGGTACAACCAAGCGCATACCGAATTTTGGAATAACTGGTTCACTGATGTTTTTGATTTACGTACAGCGAATGATTTT GGCTTAAGTGTGTGGGCCTTAATTCTTGGCGTTAATTTATTTATTCCTGAATGCCCCAGCGTGGTTTTAACGACTGAACA AAAACGCCTGGTATGCAGACTGCGTTATTATCAATTAATTACGCGTTGCACCATTCCCGAAGTTAACGGGATCATGATGG ATATGTTCGCGACTGAGAACGGCAAGGCTTACGCGCTCGATCCTAATGACATGTCGTCAATCATGTATGTATTCACTGAA CAGCCAGCCAGCGCTGTAGCGTTGATACTGACCAAATATGACTTATTACCGCGTCCTGCAACCGTGGGCCTAAAGTTTCG TGTTATTCGCTATATTCCCTTTGGCTTCGGTCAATACTATCAAAACTTTGAACATGCCGGGTTTTGGGATGGAGGCGAAC TGATTAATTACGGATGGCGCATTAACTTATTTTTTGACAATGATAGCGGCGTACTGCACGGGCAAATAGCATCATCTGAC AGTACGATAGATTTATCGGGTATTGACGTCACGCTGTACTACACAAAATCAACGGGTGAGACATTTACACGTGAAGTCAC GACTGCTGACGGGTTATTTACGGACCTTGTAAGTCGATCAGGGGCTTACTCTGTCATTGCAAAGACACAGATATTTACGC CAACTTGCACAGTAGATAATGTTGAATCAAGAAGCTACACGTTCACGTACTTAATTAGCGGTGCTGATGTGATGCTTAAG ATTTACAACACTGAAGCGCCGTTATTTAAATTAAACGACATTGGTGAGGTAATCACGATTGATTACGGCGATGGCGTAGA CAGTGATGATTATCGTGTTGATAGCCAAGGGTTGGTTTATGCAACTCGCGCGTTGACTACGGGGGTTACGTATAGAATAA CGATAAAGCGTAGTAATAGCTGTGTGTTTTATCATTCATCGTTGGCGTTTGAAAATAAAGTAATAGAAGTCATTAGCGTG TCAGGCAGCAGGCAGAGTATGGCTAACTCATTTACAGCTTGCACTGAGTTACAAGTAATACAGGCTGGGGCATTCGATTA TTTGCCAAATGTCACTACGTTTAGTTTTGCGTTTAATGACTGCTTATCGCTGCAATTGATACCTGATAATTTATTTAAAT ATTGTACGCGCGTTGTTAACTTTAGTTATGTATTCTTATCTTGTGGGAGTTTGCAATATATACCCACAGGATTGTTTGAC TACAACCCATTAGTGACAACATTTCAGTTTGCATTTAGATTCTGTACGTCTCTTAAAGAAATTCCGGCAGGTTTGTTTGA TAACAATACGTTCGTTACATCATTTAAAATCACGTTCGGAAATTGCTCAAAAATATTAAGTGCGCCAACTGGGTTATTCG ATAATGCACCGAATGCGACAATTTTTGAAAACGTATTTGTAGATTGCTTGCTTATGACTTCTGACATCAATGATATCTTC CCGCTTGCTGAATATAACGCAATTAAAGATTTGTGGTGGGCGTTTAACAATTGCCGGTTATTGCGCGGTAGTGCACTTAC ATTTATAGATAAAGTGACGAATGTAACAATCAAGACAAAGGCATTTACGAATGCGTCTAGTTTGTCAGATTACAATCAAA TACCCGCAGCTTGGAGGTAG
Upstream 100 bases:
>100_bases TTAAATTCCACATGGATTCTAAATCGTATCTTCTTTTAATGGATGAATCTAACGCGGCATTAGCAGACGCAATATTAGAT AACATTACTTAATAAAATAA
Downstream 100 bases:
>100_bases TAAATGGTATCGCTGGCAGTGATAAAAGAAAGGATAGATTACCAACAAACTGATGAGAATTTTATAAATTATCTCAAAAT ATTAAATATGAATGGTGTGA
Product: hypothetical protein
Products: NA
Alternate protein names: Phage Related-Protein; Cellulosome Dockerin Type I; Cellulosome
Number of amino acids: Translated: 619; Mature: 619
Protein sequence:
>619_residues MQLLAHLFWWVFLWTQYMSKQIPEINSSMDLLRNIIWQYDGSEEIQTLMQKKEEWYNQAHTEFWNNWFTDVFDLRTANDF GLSVWALILGVNLFIPECPSVVLTTEQKRLVCRLRYYQLITRCTIPEVNGIMMDMFATENGKAYALDPNDMSSIMYVFTE QPASAVALILTKYDLLPRPATVGLKFRVIRYIPFGFGQYYQNFEHAGFWDGGELINYGWRINLFFDNDSGVLHGQIASSD STIDLSGIDVTLYYTKSTGETFTREVTTADGLFTDLVSRSGAYSVIAKTQIFTPTCTVDNVESRSYTFTYLISGADVMLK IYNTEAPLFKLNDIGEVITIDYGDGVDSDDYRVDSQGLVYATRALTTGVTYRITIKRSNSCVFYHSSLAFENKVIEVISV SGSRQSMANSFTACTELQVIQAGAFDYLPNVTTFSFAFNDCLSLQLIPDNLFKYCTRVVNFSYVFLSCGSLQYIPTGLFD YNPLVTTFQFAFRFCTSLKEIPAGLFDNNTFVTSFKITFGNCSKILSAPTGLFDNAPNATIFENVFVDCLLMTSDINDIF PLAEYNAIKDLWWAFNNCRLLRGSALTFIDKVTNVTIKTKAFTNASSLSDYNQIPAAWR
Sequences:
>Translated_619_residues MQLLAHLFWWVFLWTQYMSKQIPEINSSMDLLRNIIWQYDGSEEIQTLMQKKEEWYNQAHTEFWNNWFTDVFDLRTANDF GLSVWALILGVNLFIPECPSVVLTTEQKRLVCRLRYYQLITRCTIPEVNGIMMDMFATENGKAYALDPNDMSSIMYVFTE QPASAVALILTKYDLLPRPATVGLKFRVIRYIPFGFGQYYQNFEHAGFWDGGELINYGWRINLFFDNDSGVLHGQIASSD STIDLSGIDVTLYYTKSTGETFTREVTTADGLFTDLVSRSGAYSVIAKTQIFTPTCTVDNVESRSYTFTYLISGADVMLK IYNTEAPLFKLNDIGEVITIDYGDGVDSDDYRVDSQGLVYATRALTTGVTYRITIKRSNSCVFYHSSLAFENKVIEVISV SGSRQSMANSFTACTELQVIQAGAFDYLPNVTTFSFAFNDCLSLQLIPDNLFKYCTRVVNFSYVFLSCGSLQYIPTGLFD YNPLVTTFQFAFRFCTSLKEIPAGLFDNNTFVTSFKITFGNCSKILSAPTGLFDNAPNATIFENVFVDCLLMTSDINDIF PLAEYNAIKDLWWAFNNCRLLRGSALTFIDKVTNVTIKTKAFTNASSLSDYNQIPAAWR >Mature_619_residues MQLLAHLFWWVFLWTQYMSKQIPEINSSMDLLRNIIWQYDGSEEIQTLMQKKEEWYNQAHTEFWNNWFTDVFDLRTANDF GLSVWALILGVNLFIPECPSVVLTTEQKRLVCRLRYYQLITRCTIPEVNGIMMDMFATENGKAYALDPNDMSSIMYVFTE QPASAVALILTKYDLLPRPATVGLKFRVIRYIPFGFGQYYQNFEHAGFWDGGELINYGWRINLFFDNDSGVLHGQIASSD STIDLSGIDVTLYYTKSTGETFTREVTTADGLFTDLVSRSGAYSVIAKTQIFTPTCTVDNVESRSYTFTYLISGADVMLK IYNTEAPLFKLNDIGEVITIDYGDGVDSDDYRVDSQGLVYATRALTTGVTYRITIKRSNSCVFYHSSLAFENKVIEVISV SGSRQSMANSFTACTELQVIQAGAFDYLPNVTTFSFAFNDCLSLQLIPDNLFKYCTRVVNFSYVFLSCGSLQYIPTGLFD YNPLVTTFQFAFRFCTSLKEIPAGLFDNNTFVTSFKITFGNCSKILSAPTGLFDNAPNATIFENVFVDCLLMTSDINDIF PLAEYNAIKDLWWAFNNCRLLRGSALTFIDKVTNVTIKTKAFTNASSLSDYNQIPAAWR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 70264; Mature: 70264
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLLAHLFWWVFLWTQYMSKQIPEINSSMDLLRNIIWQYDGSEEIQTLMQKKEEWYNQAH CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH TEFWNNWFTDVFDLRTANDFGLSVWALILGVNLFIPECPSVVLTTEQKRLVCRLRYYQLI HHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCEECCCCCCEEEECCHHHHHHHHHHHHHH TRCTIPEVNGIMMDMFATENGKAYALDPNDMSSIMYVFTEQPASAVALILTKYDLLPRPA HHCCCCCCCCEEEEEEECCCCCEEEECCCCCCCEEEEEECCCHHHHEEEEHHHHCCCCCC TVGLKFRVIRYIPFGFGQYYQNFEHAGFWDGGELINYGWRINLFFDNDSGVLHGQIASSD CCCEEEEEEEEECCCHHHHHHCCCCCCCCCCCCEEEEEEEEEEEEECCCCEEEEEECCCC STIDLSGIDVTLYYTKSTGETFTREVTTADGLFTDLVSRSGAYSVIAKTQIFTPTCTVDN CEEEECCEEEEEEEECCCCCCCEEEECCCCHHHHHHHHCCCCEEEEEEEEEECCCCCCCC VESRSYTFTYLISGADVMLKIYNTEAPLFKLNDIGEVITIDYGDGVDSDDYRVDSQGLVY CCCCCEEEEEEEECCEEEEEEECCCCCEEEECCCCCEEEEECCCCCCCCCCEECCCCEEE ATRALTTGVTYRITIKRSNSCVFYHSSLAFENKVIEVISVSGSRQSMANSFTACTELQVI EEEHHHCCEEEEEEEEECCCEEEEECCCCCCCCEEEEEEECCCHHHHHHHHHHHHEEEEE QAGAFDYLPNVTTFSFAFNDCLSLQLIPDNLFKYCTRVVNFSYVFLSCGSLQYIPTGLFD ECCCHHHCCCCEEEEEECCCCEEEEECHHHHHHHHHHHHCCEEEEEECCCCEECCCCCCC YNPLVTTFQFAFRFCTSLKEIPAGLFDNNTFVTSFKITFGNCSKILSAPTGLFDNAPNAT CCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEECCHHHHHCCCCCCCCCCCCCH IFENVFVDCLLMTSDINDIFPLAEYNAIKDLWWAFNNCRLLRGSALTFIDKVTNVTIKTK HHHHHHHHHHEEECCCCHHCCCHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHCEEEEEE AFTNASSLSDYNQIPAAWR ECCCCCCCCHHHCCCCCCC >Mature Secondary Structure MQLLAHLFWWVFLWTQYMSKQIPEINSSMDLLRNIIWQYDGSEEIQTLMQKKEEWYNQAH CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH TEFWNNWFTDVFDLRTANDFGLSVWALILGVNLFIPECPSVVLTTEQKRLVCRLRYYQLI HHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCEECCCCCCEEEECCHHHHHHHHHHHHHH TRCTIPEVNGIMMDMFATENGKAYALDPNDMSSIMYVFTEQPASAVALILTKYDLLPRPA HHCCCCCCCCEEEEEEECCCCCEEEECCCCCCCEEEEEECCCHHHHEEEEHHHHCCCCCC TVGLKFRVIRYIPFGFGQYYQNFEHAGFWDGGELINYGWRINLFFDNDSGVLHGQIASSD CCCEEEEEEEEECCCHHHHHHCCCCCCCCCCCCEEEEEEEEEEEEECCCCEEEEEECCCC STIDLSGIDVTLYYTKSTGETFTREVTTADGLFTDLVSRSGAYSVIAKTQIFTPTCTVDN CEEEECCEEEEEEEECCCCCCCEEEECCCCHHHHHHHHCCCCEEEEEEEEEECCCCCCCC VESRSYTFTYLISGADVMLKIYNTEAPLFKLNDIGEVITIDYGDGVDSDDYRVDSQGLVY CCCCCEEEEEEEECCEEEEEEECCCCCEEEECCCCCEEEEECCCCCCCCCCEECCCCEEE ATRALTTGVTYRITIKRSNSCVFYHSSLAFENKVIEVISVSGSRQSMANSFTACTELQVI EEEHHHCCEEEEEEEEECCCEEEEECCCCCCCCEEEEEEECCCHHHHHHHHHHHHEEEEE QAGAFDYLPNVTTFSFAFNDCLSLQLIPDNLFKYCTRVVNFSYVFLSCGSLQYIPTGLFD ECCCHHHCCCCEEEEEECCCCEEEEECHHHHHHHHHHHHCCEEEEEECCCCEECCCCCCC YNPLVTTFQFAFRFCTSLKEIPAGLFDNNTFVTSFKITFGNCSKILSAPTGLFDNAPNAT CCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEECCHHHHHCCCCCCCCCCCCCH IFENVFVDCLLMTSDINDIFPLAEYNAIKDLWWAFNNCRLLRGSALTFIDKVTNVTIKTK HHHHHHHHHHEEECCCCHHCCCHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHCEEEEEE AFTNASSLSDYNQIPAAWR ECCCCCCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA