| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153950408
Identifier: 153950408
GI number: 153950408
Start: 1352251
End: 1352811
Strand: Reverse
Name: 153950408
Synonym: YpsIP31758_1149
Alternate gene names: NA
Gene position: 1352811-1352251 (Counterclockwise)
Preceding gene: 153948958
Following gene: 153950100
Centisome position: 28.64
GC content: 40.64
Gene sequence:
>561_bases ATGAAAATAATCTATATCACTTTTGCCTCTGCGGTGTTGTTCAGCTCACCATCGCTAGCATATAACCCCCTTTTCTCATC ATTTCCTCCCATTTATTGGGTATATAATTCCCCCACAGCGACCACTTGGCTTAAGCTTGAAAATCAATTTAACCCACTCT ATTTGATGACTAGATCCTTTTGGTTTACACAGCATGGCAATTCAGCCCAACAATTGACAAATCTGGCATTAATAACCAGT AATGGTGCTGTATCTGGCAATTTTTCAATAGAGGGAGTCCAAACGAATTATTGGCTTGATCGCGGGCAGGGACAAATCGA GATAACAGCGACAACCCATGAACATTTGTTGATAACCGCTTATCTCTTTGATGTGAATGGTCAGGAAAAAGCACAAACCG CGACATTAATTAATAATCGAACAAAAAACCTGATATTACTCTTAGATAATATCGTGGCAGGAAATTATCGGCTGGTTATT AAAGCGTTAGCCACTGACCATCAAACCGCCATTAAAACCTTCCACATAACCTTAGCCGATATCGTTCCCCAGACACGCTA G
Upstream 100 bases:
>100_bases TTCATCGAGGCAAGCGTTCATTGATGCAAACGTTCATTGATGCAAGATAGCGGTGAGTGACTGCTGCAAATTTTCGCCCC CCATAAAGGAAGATATTCAC
Downstream 100 bases:
>100_bases TCACTAACAAAAAAGATAGCGTACTGCCTATATAAAAATTAACACCCAACAGGAAGAGTTCTTCCTATTCAATGGGTATG TGCTAAACATATCCATTATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 186; Mature: 186
Protein sequence:
>186_residues MKIIYITFASAVLFSSPSLAYNPLFSSFPPIYWVYNSPTATTWLKLENQFNPLYLMTRSFWFTQHGNSAQQLTNLALITS NGAVSGNFSIEGVQTNYWLDRGQGQIEITATTHEHLLITAYLFDVNGQEKAQTATLINNRTKNLILLLDNIVAGNYRLVI KALATDHQTAIKTFHITLADIVPQTR
Sequences:
>Translated_186_residues MKIIYITFASAVLFSSPSLAYNPLFSSFPPIYWVYNSPTATTWLKLENQFNPLYLMTRSFWFTQHGNSAQQLTNLALITS NGAVSGNFSIEGVQTNYWLDRGQGQIEITATTHEHLLITAYLFDVNGQEKAQTATLINNRTKNLILLLDNIVAGNYRLVI KALATDHQTAIKTFHITLADIVPQTR >Mature_186_residues MKIIYITFASAVLFSSPSLAYNPLFSSFPPIYWVYNSPTATTWLKLENQFNPLYLMTRSFWFTQHGNSAQQLTNLALITS NGAVSGNFSIEGVQTNYWLDRGQGQIEITATTHEHLLITAYLFDVNGQEKAQTATLINNRTKNLILLLDNIVAGNYRLVI KALATDHQTAIKTFHITLADIVPQTR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20915; Mature: 20915
Theoretical pI: Translated: 8.78; Mature: 8.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIIYITFASAVLFSSPSLAYNPLFSSFPPIYWVYNSPTATTWLKLENQFNPLYLMTRSF CEEEEEEEEEEEHHCCCCCEECCHHHCCCCEEEEECCCCEEEEEEEECCCCCEEEEEEEE WFTQHGNSAQQLTNLALITSNGAVSGNFSIEGVQTNYWLDRGQGQIEITATTHEHLLITA EEEECCCCHHHHEEEEEEECCCEEECCEEEEEEEEEEEEECCCCEEEEEEECCCEEEEEE YLFDVNGQEKAQTATLINNRTKNLILLLDNIVAGNYRLVIKALATDHQTAIKTFHITLAD EEEECCCCCHHHEEEECCCCCCEEEEEEECCCCCCEEEEEEEECCCCCCEEEEEEEEEHH IVPQTR HCCCCC >Mature Secondary Structure MKIIYITFASAVLFSSPSLAYNPLFSSFPPIYWVYNSPTATTWLKLENQFNPLYLMTRSF CEEEEEEEEEEEHHCCCCCEECCHHHCCCCEEEEECCCCEEEEEEEECCCCCEEEEEEEE WFTQHGNSAQQLTNLALITSNGAVSGNFSIEGVQTNYWLDRGQGQIEITATTHEHLLITA EEEECCCCHHHHEEEEEEECCCEEECCEEEEEEEEEEEEECCCCEEEEEEECCCEEEEEE YLFDVNGQEKAQTATLINNRTKNLILLLDNIVAGNYRLVIKALATDHQTAIKTFHITLAD EEEECCCCCHHHEEEECCCCCCEEEEEEECCCCCCEEEEEEEECCCCCCEEEEEEEEEHH IVPQTR HCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA