| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153950100
Identifier: 153950100
GI number: 153950100
Start: 1351554
End: 1351928
Strand: Reverse
Name: 153950100
Synonym: YpsIP31758_1148
Alternate gene names: NA
Gene position: 1351928-1351554 (Counterclockwise)
Preceding gene: 153950408
Following gene: 153947131
Centisome position: 28.62
GC content: 41.6
Gene sequence:
>375_bases TTGAACGCTGCTTGCAGCGACATCAAAGAGGTGAGACCCATAGATGGGCCGAGTAACGAAAGCAGCCGACATACATGCAG CTTGAAGTCTGTCGGGTATATATTATTAACCCTCAACAAAGGTACTATAATGAATAAATATAATAGCGTATTCCTCCTTG TTACTCTCAGTGCCGCCATTATCTCTTTCAATACTCGCGCTGCAGAACATGGAATGATCACATTGAATCAAAACTCGGGT AACCTGCAACCTATTAGCCCCCTAGTTCTCTTGGCCGCTGAAAATGGGGTTCTCCCTTCATTTGAAGTTCAACATTTAGC AAATAGTTATAATCGATATGGCAACAAAGTAAAAATAGAGTTTACCATGAGCTAG
Upstream 100 bases:
>100_bases AGGCGGCAATTGAGTAAGTCCTCAGAATTTATTTTAAGGTCAACAACAAGTCAGTGACTTGGATGACAACGGTTATTGAC ACCTAGCGCCAGAAGCAGAT
Downstream 100 bases:
>100_bases GAACAATTAATAAATTATTATATTTACATAACCAATAGCACAGGGGTTAATTATTATGAAACCTCTGGATTTATTAATAA CTCACAAAAAAACATCAATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 124; Mature: 124
Protein sequence:
>124_residues MNAACSDIKEVRPIDGPSNESSRHTCSLKSVGYILLTLNKGTIMNKYNSVFLLVTLSAAIISFNTRAAEHGMITLNQNSG NLQPISPLVLLAAENGVLPSFEVQHLANSYNRYGNKVKIEFTMS
Sequences:
>Translated_124_residues MNAACSDIKEVRPIDGPSNESSRHTCSLKSVGYILLTLNKGTIMNKYNSVFLLVTLSAAIISFNTRAAEHGMITLNQNSG NLQPISPLVLLAAENGVLPSFEVQHLANSYNRYGNKVKIEFTMS >Mature_124_residues MNAACSDIKEVRPIDGPSNESSRHTCSLKSVGYILLTLNKGTIMNKYNSVFLLVTLSAAIISFNTRAAEHGMITLNQNSG NLQPISPLVLLAAENGVLPSFEVQHLANSYNRYGNKVKIEFTMS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13516; Mature: 13516
Theoretical pI: Translated: 8.72; Mature: 8.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAACSDIKEVRPIDGPSNESSRHTCSLKSVGYILLTLNKGTIMNKYNSVFLLVTLSAAI CCCCCCCHHHCCCCCCCCCCCCCEEEEECCCCEEEEEECCCEEEECCCCEEEEEEEHHHH ISFNTRAAEHGMITLNQNSGNLQPISPLVLLAAENGVLPSFEVQHLANSYNRYGNKVKIE HCCCCCCCCCCEEEEECCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEE FTMS EEEC >Mature Secondary Structure MNAACSDIKEVRPIDGPSNESSRHTCSLKSVGYILLTLNKGTIMNKYNSVFLLVTLSAAI CCCCCCCHHHCCCCCCCCCCCCCEEEEECCCCEEEEEECCCEEEECCCCEEEEEEEHHHH ISFNTRAAEHGMITLNQNSGNLQPISPLVLLAAENGVLPSFEVQHLANSYNRYGNKVKIE HCCCCCCCCCCEEEEECCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEE FTMS EEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA