| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is mmlH [H]
Identifier: 153950382
GI number: 153950382
Start: 2475785
End: 2477014
Strand: Direct
Name: mmlH [H]
Synonym: YpsIP31758_2152
Alternate gene names: 153950382
Gene position: 2475785-2477014 (Clockwise)
Preceding gene: 153950367
Following gene: 153947417
Centisome position: 52.42
GC content: 50.89
Gene sequence:
>1230_bases ATGCGTTGGTTTAGCGATCTCAACCAGACAGAAAGAAAAACTTTCATTGCTGCTTTTGGCGGTTGGGCATTGGATGCGCT AGATTTCATGGTTTTTACATTCGTGATTGCTACGCTGATGGCTCTCTGGCAAATCGACGCAGGCCAGGCCGGAATGCTGA GCACCGTCACCCTGCTTTTCTCCGCTATTGGTGGCTGGGGTGCAGGTATCCTTGCTGATCGTTATGGCAGGGTGCGTATC CTGCAAATAACTATTTTATGGTTCTCCTTATGTACGGTACTCATCGGATTTGCTCAGAACTTCGAACACGTTTTCATCCT ACGCGCGCTACAAGGTTTAGGTTTTGGTGGTGAATGGGCCGTAGGTTCTGTATTGATGGGGGAAATCGTCCGCGCCGAAC ATCGCGGGAAAGCCGTAGGCACCGTGCAAAGTGGATGGGCGATTGGTTGGGGTGCAGCAGCCTTGCTTTACACGCTAATG TTCTCGGTACTATCAGAGGAGTGGGCGTGGCGCGCATTATTCTGGATTGGTGTGCTTCCCGCCCTTTTAGTACTCTACAT ACGTAAAAACGTCCCAGAACCCGCGTTATTCCTGAAATCCCGCCACGAGCAGCAAGCCAAGGATCGACGCGTTTCTTCCT TCGCCATTTTCTCCCCCGCGCTACTCAAGACCACCGTTCTGGCTTCTTTACTCTGTACCGGAGTGCAAGGCGGCTACTAC GCCATCACAACTTGGCTGCCCACTTTTCTCAAACTCGAACGCAATCTCTCGGTGATCGGTACTGGTGGGTATCTCATGGT GATTATATTTGGCTCTTTCGTCGGCTATATTTGTGGCGCTTATCTCACCGACAAACTTGGGCGACGGGCAAATCTGATTA TCTTCTCACTGCTGTCGTGTATAACAATTTTTGCTTATACCCAACTTACGCTGACCAACACGCAGATGCTCGTTCTGGGA TTCCCACTCGGCTTTTCGGCATCCGGGATCTTCAGCGGCATGGGTGCCTTTCTCACTGAGCTTTTTCCTTCGGCGGTACG TGCTACAGGACAAGGTTTTACCTATAGTTTTGGTCGTGCCGCCGGTGCACTCTTTCCGGGGCTGGTCGGCTATCTGAGTC AGTCAAGCAGTCTGGCATTTGCCATTGGAGTCTTCGCTGGCAGTGCCTATTGCATCGTATTGGTAATGAGCCTATTGCTG CCCGAGACCAAAAATAAACAGCTAGAATAA
Upstream 100 bases:
>100_bases TGGTCGATAACCCTGCTCGTCTATATGATTTTTAAAAATAACAAAATAACTTGTGAGGTGCTCACAAGAGTTAAAAAGCC AGTCTGTAAAGGAGATATTT
Downstream 100 bases:
>100_bases GTGACGATTTATGGCCATGAGCATCAGACTGTTTCTCTGATATTTATGCTTCTAAGCTGCCTGTACAACAGTGAACAGAA AGCAACGCATCCGTTTGGAT
Product: major facilitator transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 409; Mature: 409
Protein sequence:
>409_residues MRWFSDLNQTERKTFIAAFGGWALDALDFMVFTFVIATLMALWQIDAGQAGMLSTVTLLFSAIGGWGAGILADRYGRVRI LQITILWFSLCTVLIGFAQNFEHVFILRALQGLGFGGEWAVGSVLMGEIVRAEHRGKAVGTVQSGWAIGWGAAALLYTLM FSVLSEEWAWRALFWIGVLPALLVLYIRKNVPEPALFLKSRHEQQAKDRRVSSFAIFSPALLKTTVLASLLCTGVQGGYY AITTWLPTFLKLERNLSVIGTGGYLMVIIFGSFVGYICGAYLTDKLGRRANLIIFSLLSCITIFAYTQLTLTNTQMLVLG FPLGFSASGIFSGMGAFLTELFPSAVRATGQGFTYSFGRAAGALFPGLVGYLSQSSSLAFAIGVFAGSAYCIVLVMSLLL PETKNKQLE
Sequences:
>Translated_409_residues MRWFSDLNQTERKTFIAAFGGWALDALDFMVFTFVIATLMALWQIDAGQAGMLSTVTLLFSAIGGWGAGILADRYGRVRI LQITILWFSLCTVLIGFAQNFEHVFILRALQGLGFGGEWAVGSVLMGEIVRAEHRGKAVGTVQSGWAIGWGAAALLYTLM FSVLSEEWAWRALFWIGVLPALLVLYIRKNVPEPALFLKSRHEQQAKDRRVSSFAIFSPALLKTTVLASLLCTGVQGGYY AITTWLPTFLKLERNLSVIGTGGYLMVIIFGSFVGYICGAYLTDKLGRRANLIIFSLLSCITIFAYTQLTLTNTQMLVLG FPLGFSASGIFSGMGAFLTELFPSAVRATGQGFTYSFGRAAGALFPGLVGYLSQSSSLAFAIGVFAGSAYCIVLVMSLLL PETKNKQLE >Mature_409_residues MRWFSDLNQTERKTFIAAFGGWALDALDFMVFTFVIATLMALWQIDAGQAGMLSTVTLLFSAIGGWGAGILADRYGRVRI LQITILWFSLCTVLIGFAQNFEHVFILRALQGLGFGGEWAVGSVLMGEIVRAEHRGKAVGTVQSGWAIGWGAAALLYTLM FSVLSEEWAWRALFWIGVLPALLVLYIRKNVPEPALFLKSRHEQQAKDRRVSSFAIFSPALLKTTVLASLLCTGVQGGYY AITTWLPTFLKLERNLSVIGTGGYLMVIIFGSFVGYICGAYLTDKLGRRANLIIFSLLSCITIFAYTQLTLTNTQMLVLG FPLGFSASGIFSGMGAFLTELFPSAVRATGQGFTYSFGRAAGALFPGLVGYLSQSSSLAFAIGVFAGSAYCIVLVMSLLL PETKNKQLE
Specific function: Probable uptake of 4-methylmuconolactone [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Homo sapiens, GI24308167, Length=446, Percent_Identity=22.6457399103139, Blast_Score=86, Evalue=6e-17, Organism=Homo sapiens, GI213021148, Length=445, Percent_Identity=25.8426966292135, Blast_Score=82, Evalue=7e-16, Organism=Escherichia coli, GI87082404, Length=374, Percent_Identity=29.144385026738, Blast_Score=144, Evalue=9e-36, Organism=Escherichia coli, GI87082231, Length=464, Percent_Identity=27.5862068965517, Blast_Score=133, Evalue=2e-32, Organism=Escherichia coli, GI1790550, Length=432, Percent_Identity=26.1574074074074, Blast_Score=100, Evalue=3e-22, Organism=Escherichia coli, GI87081723, Length=378, Percent_Identity=28.5714285714286, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI1788292, Length=433, Percent_Identity=23.7875288683603, Blast_Score=86, Evalue=6e-18, Organism=Escherichia coli, GI87082159, Length=390, Percent_Identity=25.3846153846154, Blast_Score=75, Evalue=5e-15, Organism=Escherichia coli, GI1789941, Length=443, Percent_Identity=26.6365688487585, Blast_Score=72, Evalue=9e-14, Organism=Escherichia coli, GI1788942, Length=345, Percent_Identity=24.6376811594203, Blast_Score=67, Evalue=1e-12, Organism=Caenorhabditis elegans, GI32564663, Length=444, Percent_Identity=25, Blast_Score=89, Evalue=5e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 44532; Mature: 44532
Theoretical pI: Translated: 9.45; Mature: 9.45
Prosite motif: PS50850 MFS ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRWFSDLNQTERKTFIAAFGGWALDALDFMVFTFVIATLMALWQIDAGQAGMLSTVTLLF CCCHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH SAIGGWGAGILADRYGRVRILQITILWFSLCTVLIGFAQNFEHVFILRALQGLGFGGEWA HHHCCCCHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHH VGSVLMGEIVRAEHRGKAVGTVQSGWAIGWGAAALLYTLMFSVLSEEWAWRALFWIGVLP HHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALLVLYIRKNVPEPALFLKSRHEQQAKDRRVSSFAIFSPALLKTTVLASLLCTGVQGGYY HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE AITTWLPTFLKLERNLSVIGTGGYLMVIIFGSFVGYICGAYLTDKLGRRANLIIFSLLSC EHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH ITIFAYTQLTLTNTQMLVLGFPLGFSASGIFSGMGAFLTELFPSAVRATGQGFTYSFGRA HHHHHHHHHEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHH AGALFPGLVGYLSQSSSLAFAIGVFAGSAYCIVLVMSLLLPETKNKQLE HHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MRWFSDLNQTERKTFIAAFGGWALDALDFMVFTFVIATLMALWQIDAGQAGMLSTVTLLF CCCHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH SAIGGWGAGILADRYGRVRILQITILWFSLCTVLIGFAQNFEHVFILRALQGLGFGGEWA HHHCCCCHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHH VGSVLMGEIVRAEHRGKAVGTVQSGWAIGWGAAALLYTLMFSVLSEEWAWRALFWIGVLP HHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALLVLYIRKNVPEPALFLKSRHEQQAKDRRVSSFAIFSPALLKTTVLASLLCTGVQGGYY HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE AITTWLPTFLKLERNLSVIGTGGYLMVIIFGSFVGYICGAYLTDKLGRRANLIIFSLLSC EHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH ITIFAYTQLTLTNTQMLVLGFPLGFSASGIFSGMGAFLTELFPSAVRATGQGFTYSFGRA HHHHHHHHHEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHH AGALFPGLVGYLSQSSSLAFAIGVFAGSAYCIVLVMSLLLPETKNKQLE HHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9461415 [H]