| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153947417
Identifier: 153947417
GI number: 153947417
Start: 2477234
End: 2477794
Strand: Direct
Name: 153947417
Synonym: YpsIP31758_2153
Alternate gene names: NA
Gene position: 2477234-2477794 (Clockwise)
Preceding gene: 153950382
Following gene: 153947009
Centisome position: 52.45
GC content: 39.04
Gene sequence:
>561_bases ATGACCGCAGTAAACCAATTAATCAGCGCATTAGCACAAAGTATACCCTTGCTGGATATTGAGCCTTTACAGGCAAATAA ACTCGAAAAATTGGATCAAGGAAACGTACTGAACTGGCTTTATACCCATTTAAGCCAACAACAGCTGATGGTTTATGAAG AATGGAAAGAATATTGCGGATACACGCCAGAGCTGAAGTCCCTTGACTGTCTCTTTTTACCGGAAAATATGGGGGATTTT GTCATATCTCTGGTTAATGGGATTGATTGGGACAGCATTGACCCTATGACTGCAGAAGTCGATTACTTTATGCTCCCATA TCAACTGCCTTACTTAGAGCATATGAATTCTTATCTTCAACAATACAAACTGAGGTTAGTTGACCTTGCACCGTTTGAAA ATGCTTATATTTTCTGTATTCATGACATCCCTCAGTCAATTAATCAGCTTAAGGATGCATTAAAAGCATTTGATATCGAA CTCTGTGAACGCGACGCATTAGATCAACAGCAAGCAGCAGAATATATCCAGTCTTTACTACCCCCTAATAGGGATAAATA A
Upstream 100 bases:
>100_bases GCATATAATAGCGTCGTCTCATAATTAATTGTGTTACTTCATTTATCCACACAAATTAAAATGGTATATGATAACCATTT AGCGCCCAAGGACGAACATA
Downstream 100 bases:
>100_bases TTTAAAAAATAGGATTATTAATTAATGTTTAACCAAAACATTCAATGCAAGAAAATTTTATCACTGTTTTTGGTTTTGTC TGGCTCTGCCTTTTTAAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 186; Mature: 185
Protein sequence:
>186_residues MTAVNQLISALAQSIPLLDIEPLQANKLEKLDQGNVLNWLYTHLSQQQLMVYEEWKEYCGYTPELKSLDCLFLPENMGDF VISLVNGIDWDSIDPMTAEVDYFMLPYQLPYLEHMNSYLQQYKLRLVDLAPFENAYIFCIHDIPQSINQLKDALKAFDIE LCERDALDQQQAAEYIQSLLPPNRDK
Sequences:
>Translated_186_residues MTAVNQLISALAQSIPLLDIEPLQANKLEKLDQGNVLNWLYTHLSQQQLMVYEEWKEYCGYTPELKSLDCLFLPENMGDF VISLVNGIDWDSIDPMTAEVDYFMLPYQLPYLEHMNSYLQQYKLRLVDLAPFENAYIFCIHDIPQSINQLKDALKAFDIE LCERDALDQQQAAEYIQSLLPPNRDK >Mature_185_residues TAVNQLISALAQSIPLLDIEPLQANKLEKLDQGNVLNWLYTHLSQQQLMVYEEWKEYCGYTPELKSLDCLFLPENMGDFV ISLVNGIDWDSIDPMTAEVDYFMLPYQLPYLEHMNSYLQQYKLRLVDLAPFENAYIFCIHDIPQSINQLKDALKAFDIEL CERDALDQQQAAEYIQSLLPPNRDK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21627; Mature: 21496
Theoretical pI: Translated: 4.01; Mature: 4.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAVNQLISALAQSIPLLDIEPLQANKLEKLDQGNVLNWLYTHLSQQQLMVYEEWKEYCG CCHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC YTPELKSLDCLFLPENMGDFVISLVNGIDWDSIDPMTAEVDYFMLPYQLPYLEHMNSYLQ CCCCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHH QYKLRLVDLAPFENAYIFCIHDIPQSINQLKDALKAFDIELCERDALDQQQAAEYIQSLL HHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC PPNRDK CCCCCC >Mature Secondary Structure TAVNQLISALAQSIPLLDIEPLQANKLEKLDQGNVLNWLYTHLSQQQLMVYEEWKEYCG CHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC YTPELKSLDCLFLPENMGDFVISLVNGIDWDSIDPMTAEVDYFMLPYQLPYLEHMNSYLQ CCCCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHH QYKLRLVDLAPFENAYIFCIHDIPQSINQLKDALKAFDIELCERDALDQQQAAEYIQSLL HHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC PPNRDK CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA