| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153950371
Identifier: 153950371
GI number: 153950371
Start: 2310216
End: 2311388
Strand: Direct
Name: 153950371
Synonym: YpsIP31758_2005
Alternate gene names: NA
Gene position: 2310216-2311388 (Clockwise)
Preceding gene: 153947823
Following gene: 153946927
Centisome position: 48.91
GC content: 54.65
Gene sequence:
>1173_bases ATGCGAAAAACTTCATCACTGTTTCTCCTGTTTGGCACGTTGTTCAGCGCAGGAGGCTATGGTGCCACATTTCTCATTTC TGCTTGGTTTCACTCGCAGGGGGGCAACGACATTGACGCTGGGGCAACCCTCGGTATGGCTCTGTTCGGGACACTCATCG GTGTGCCTTTGGTTGGCTGGTTTGCTGGAAAATTGGACGCCTCACGTCTGGCGGCGCTGGCAGCACTGATCCAGTCCTGT GGCTACTTTCTACTGGGGAGCCTCAGTGGCGGATCCGGCTATCTGCCCCATGTAGCGGCACTGTTGATTGGCCTGGGCTG GGGCATGTTCTATATCGGGGGGCCAATGGCGCTGTCTGAACGCCTCACCGATACCGAACGAGGCCCTGGTTTTACACGCT TCAGTGCATTCCAGATGACCGGAATTTGCGGTAGCCCTATCCTGCTGACTATCGCGGTGGTACAAGGAGGGATCCCCATC CAGGCCGCATTTCTGTTGGTGGGCGTGATGGGAGTCTTCGCCTCTATCCTGTTGATGATTTTTGGCACCCGAGAGCCACT TATCCGGCATGAGAATTCACTGCGGCCTTGGGTAAAAAAAATTACCGTACTCGCCAAAAGCGGAGTCATCAGACCCATCG TGATGGTCTGTCTAGGGGGGGCCGTTTTTTCTGGAATGATGTCGTTTCAGGACTCGCTCACCGACGGTTCATTGGCCAGC GCCAGTACTTTTTTTGCCGTGCATGCCACTACCGCCGTGGTTTCACGCCTGTTACTTGCACACAAACTATCAAGCTGGCC CCGTACCCCACTCGTAGCGGTACTCTTGTGTTGCCTAATGATCGGCCTTGTGTGCCTGTTAGGAATACCGACGCATGTGA GTTTCCAGATCGCTGCCGCCATGCTAACCGGCGCTGGCTACGGTCTGTTATACCCCGTGATTCAAACTTGGGCGGTCAAT GAATCAGCCCCTGAAAACCGTCACGCCGCTCTGACTTGGTTTGTCGTTGCCTACTTCGTGGGTATTTTTGGTTTTCCGCC TTTTGGGGGCTGGGTACTGGTGACAGTAGGCAAGGTTTGGTTTATCTGGGTGCTGGCTACGTTGGCCACATTAGAGTTAG TGACAGCGATAGTGAAGTGGCCGCAAACCACTCACCGCCCGCTATCATCATAG
Upstream 100 bases:
>100_bases CGATTACGTCTGCCAGCGTCTGGAAAATACGGTGAAAATGCTGAGATCAATGGCTCCGCTCTCATCTGCTACAACCACAA ACGAGACAGGAGTCTGAATC
Downstream 100 bases:
>100_bases CAATCTATCATCATAACAATGAAGGTAAAGATGGCAGCTTAGGCTGTCATCGGCTAAAGCAATTTAGACATGCTGCCTTA AGCGTTATTTAGCCCAACTC
Product: major facilitator transporter
Products: NA
Alternate protein names: Facilitator Family Transporter; Facilitator Superfamily Protein; Transporter Facilitator Family; Transmembrane Protein; MFS Transporter Protein
Number of amino acids: Translated: 390; Mature: 390
Protein sequence:
>390_residues MRKTSSLFLLFGTLFSAGGYGATFLISAWFHSQGGNDIDAGATLGMALFGTLIGVPLVGWFAGKLDASRLAALAALIQSC GYFLLGSLSGGSGYLPHVAALLIGLGWGMFYIGGPMALSERLTDTERGPGFTRFSAFQMTGICGSPILLTIAVVQGGIPI QAAFLLVGVMGVFASILLMIFGTREPLIRHENSLRPWVKKITVLAKSGVIRPIVMVCLGGAVFSGMMSFQDSLTDGSLAS ASTFFAVHATTAVVSRLLLAHKLSSWPRTPLVAVLLCCLMIGLVCLLGIPTHVSFQIAAAMLTGAGYGLLYPVIQTWAVN ESAPENRHAALTWFVVAYFVGIFGFPPFGGWVLVTVGKVWFIWVLATLATLELVTAIVKWPQTTHRPLSS
Sequences:
>Translated_390_residues MRKTSSLFLLFGTLFSAGGYGATFLISAWFHSQGGNDIDAGATLGMALFGTLIGVPLVGWFAGKLDASRLAALAALIQSC GYFLLGSLSGGSGYLPHVAALLIGLGWGMFYIGGPMALSERLTDTERGPGFTRFSAFQMTGICGSPILLTIAVVQGGIPI QAAFLLVGVMGVFASILLMIFGTREPLIRHENSLRPWVKKITVLAKSGVIRPIVMVCLGGAVFSGMMSFQDSLTDGSLAS ASTFFAVHATTAVVSRLLLAHKLSSWPRTPLVAVLLCCLMIGLVCLLGIPTHVSFQIAAAMLTGAGYGLLYPVIQTWAVN ESAPENRHAALTWFVVAYFVGIFGFPPFGGWVLVTVGKVWFIWVLATLATLELVTAIVKWPQTTHRPLSS >Mature_390_residues MRKTSSLFLLFGTLFSAGGYGATFLISAWFHSQGGNDIDAGATLGMALFGTLIGVPLVGWFAGKLDASRLAALAALIQSC GYFLLGSLSGGSGYLPHVAALLIGLGWGMFYIGGPMALSERLTDTERGPGFTRFSAFQMTGICGSPILLTIAVVQGGIPI QAAFLLVGVMGVFASILLMIFGTREPLIRHENSLRPWVKKITVLAKSGVIRPIVMVCLGGAVFSGMMSFQDSLTDGSLAS ASTFFAVHATTAVVSRLLLAHKLSSWPRTPLVAVLLCCLMIGLVCLLGIPTHVSFQIAAAMLTGAGYGLLYPVIQTWAVN ESAPENRHAALTWFVVAYFVGIFGFPPFGGWVLVTVGKVWFIWVLATLATLELVTAIVKWPQTTHRPLSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41339; Mature: 41339
Theoretical pI: Translated: 9.47; Mature: 9.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKTSSLFLLFGTLFSAGGYGATFLISAWFHSQGGNDIDAGATLGMALFGTLIGVPLVGW CCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH FAGKLDASRLAALAALIQSCGYFLLGSLSGGSGYLPHVAALLIGLGWGMFYIGGPMALSE HHHCCCHHHHHHHHHHHHHCCHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHH RLTDTERGPGFTRFSAFQMTGICGSPILLTIAVVQGGIPIQAAFLLVGVMGVFASILLMI HHCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH FGTREPLIRHENSLRPWVKKITVLAKSGVIRPIVMVCLGGAVFSGMMSFQDSLTDGSLAS HCCCCHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH ASTFFAVHATTAVVSRLLLAHKLSSWPRTPLVAVLLCCLMIGLVCLLGIPTHVSFQIAAA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH MLTGAGYGLLYPVIQTWAVNESAPENRHAALTWFVVAYFVGIFGFPPFGGWVLVTVGKVW HHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH FIWVLATLATLELVTAIVKWPQTTHRPLSS HHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MRKTSSLFLLFGTLFSAGGYGATFLISAWFHSQGGNDIDAGATLGMALFGTLIGVPLVGW CCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH FAGKLDASRLAALAALIQSCGYFLLGSLSGGSGYLPHVAALLIGLGWGMFYIGGPMALSE HHHCCCHHHHHHHHHHHHHCCHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHH RLTDTERGPGFTRFSAFQMTGICGSPILLTIAVVQGGIPIQAAFLLVGVMGVFASILLMI HHCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH FGTREPLIRHENSLRPWVKKITVLAKSGVIRPIVMVCLGGAVFSGMMSFQDSLTDGSLAS HCCCCHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH ASTFFAVHATTAVVSRLLLAHKLSSWPRTPLVAVLLCCLMIGLVCLLGIPTHVSFQIAAA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH MLTGAGYGLLYPVIQTWAVNESAPENRHAALTWFVVAYFVGIFGFPPFGGWVLVTVGKVW HHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH FIWVLATLATLELVTAIVKWPQTTHRPLSS HHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA