| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153950286
Identifier: 153950286
GI number: 153950286
Start: 964187
End: 964768
Strand: Direct
Name: 153950286
Synonym: YpsIP31758_0802
Alternate gene names: NA
Gene position: 964187-964768 (Clockwise)
Preceding gene: 153950870
Following gene: 153950743
Centisome position: 20.41
GC content: 49.14
Gene sequence:
>582_bases GTGTTAGCTATTACTTCGAAAAATAAAATCTGTACTTCGAAAAATAAAACTTGGGCCGCCTGGAAAAATAAAATCTGCAT CCCAGCATTGGTCTTATTGCTCAGTGGCTGTGGGCTGACGCAAGCCGTGACTGATGGCACCGTGTCTGCCACAAAATCAC TGTTTTATAAGCAGATAAAGGTACTGCATTTGGATTTTACCGCCCGTGAAGCTCTGAATACCGATGAGCACGAAGCGAAC TCGTCATCGGAACCGGTGATGGTGAGGGCTTATCAGTTACGTGATGATAAAACCTTCTTAAAAACGGTGTATCAACAGTT GGCGAGCGACGGGGAGGCGGCACTTAAAGATGACCTGCTGGCCAGCCGCAGCGTGGTAGTGAAACCAGGCGGTGCGGTAA CATTGGATATGCCGATGGAAAAAGAGACCCAGTTTGTGGCAGTGGTGGCGCTGTTCCGACATCCAGATATGGTCAAAGAC CACTGGCGTCTGATTCTGACGCTGGACGACCTGCATCCCGATAAACCTCGGACCCTTGAGTTGGGTAATAACAGCCTGAT ATTGCGGGCGGAGACAAAGTAA
Upstream 100 bases:
>100_bases GATGACGATACGCTGTCAGACGATATACCTGAATACTATACCGTGGAACTGGGACACTACAGTGGACTGACTCCACAGAA ATACCAAGAAGGAAACCGAC
Downstream 100 bases:
>100_bases TGCCGGACGCCTCCTCGCCGTCACTGTATGAGCAATTGCTGGGCAATTTCACTGGCGGGCTTGAACTGCATCAGGTCAGT GAAGCTAATCAGGTCATTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 193; Mature: 193
Protein sequence:
>193_residues MLAITSKNKICTSKNKTWAAWKNKICIPALVLLLSGCGLTQAVTDGTVSATKSLFYKQIKVLHLDFTAREALNTDEHEAN SSSEPVMVRAYQLRDDKTFLKTVYQQLASDGEAALKDDLLASRSVVVKPGGAVTLDMPMEKETQFVAVVALFRHPDMVKD HWRLILTLDDLHPDKPRTLELGNNSLILRAETK
Sequences:
>Translated_193_residues MLAITSKNKICTSKNKTWAAWKNKICIPALVLLLSGCGLTQAVTDGTVSATKSLFYKQIKVLHLDFTAREALNTDEHEAN SSSEPVMVRAYQLRDDKTFLKTVYQQLASDGEAALKDDLLASRSVVVKPGGAVTLDMPMEKETQFVAVVALFRHPDMVKD HWRLILTLDDLHPDKPRTLELGNNSLILRAETK >Mature_193_residues MLAITSKNKICTSKNKTWAAWKNKICIPALVLLLSGCGLTQAVTDGTVSATKSLFYKQIKVLHLDFTAREALNTDEHEAN SSSEPVMVRAYQLRDDKTFLKTVYQQLASDGEAALKDDLLASRSVVVKPGGAVTLDMPMEKETQFVAVVALFRHPDMVKD HWRLILTLDDLHPDKPRTLELGNNSLILRAETK
Specific function: Unknown
COG id: COG3521
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21465; Mature: 21465
Theoretical pI: Translated: 8.48; Mature: 8.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAITSKNKICTSKNKTWAAWKNKICIPALVLLLSGCGLTQAVTDGTVSATKSLFYKQIK CEEECCCCCEECCCCCEEHHHHCCCHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHE VLHLDFTAREALNTDEHEANSSSEPVMVRAYQLRDDKTFLKTVYQQLASDGEAALKDDLL EEEECCHHHHHCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHH ASRSVVVKPGGAVTLDMPMEKETQFVAVVALFRHPDMVKDHWRLILTLDDLHPDKPRTLE HCCEEEECCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCEEE LGNNSLILRAETK ECCCEEEEEEECC >Mature Secondary Structure MLAITSKNKICTSKNKTWAAWKNKICIPALVLLLSGCGLTQAVTDGTVSATKSLFYKQIK CEEECCCCCEECCCCCEEHHHHCCCHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHE VLHLDFTAREALNTDEHEANSSSEPVMVRAYQLRDDKTFLKTVYQQLASDGEAALKDDLL EEEECCHHHHHCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHH ASRSVVVKPGGAVTLDMPMEKETQFVAVVALFRHPDMVKDHWRLILTLDDLHPDKPRTLE HCCEEEECCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCEEE LGNNSLILRAETK ECCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA