| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153950212
Identifier: 153950212
GI number: 153950212
Start: 251078
End: 252313
Strand: Direct
Name: 153950212
Synonym: YpsIP31758_0223
Alternate gene names: NA
Gene position: 251078-252313 (Clockwise)
Preceding gene: 153950238
Following gene: 153950111
Centisome position: 5.32
GC content: 38.92
Gene sequence:
>1236_bases ATGGAGTTAAATATGAGTGATGCAAACGTTATCCCCTCCCAGTTAATACCTATAAAAAGCCCTATTGCTGCAAGATTAGA TAGTAGTGATTTGATCGATGTACGGCCTCAGAATATTAATCTTATCGGTAAGAAATTAAACTCCATGGCCGATATTAATA TTGACTCAAAAAACAAAAAAATAAATATAAACATTGCTGAGAAGAAATTTAGTAGTGACTACATTCCTGAGGAATATATC TATATTGCCGTGTGGGATGCTAAAGGAAAAATGGTTTTCCAAAAAAAATTATCAGATGCAGAGATAAAAGAAGAGAAAAT AGAACTTCCATTTGAGGTGGGTTATCAACTTGAGATGTACCACCCTATCCCCAGAAGACTCGTTAGTTCTCCTGACCTTT GTAGTATTATTGACTCCAATTCTCCATTCACTCTTCTTGTGATGACGCCATTAGGCGTGACAAATCTTCAGATGGAATCT TATCCTACCGATATTATAGAGGCGGATTTTATTCATCCAAACTCAATTCCAGTGGGGAGCAATGCGGATATTATTGAATC TGAATCTGAATCTGAATCTGAATCTGAATCTGCACCGGAACCCATACCTTCTACACCTATCGCTCCTGATACCCCTCCTG CCAGCACAGATCCCATCGTCAGCGCCAGTACCCACACGGGTATCGATTCGGCAACAAAATTGATGGTATCGTTCCAGTTC AAGTTGTTGGGCTTATGTGATTATGATATTGCGACAGTGACCATCGATGAAGAGAGTAAGCTGGCAGGTATTAAGATTGT CACTGATTCTCCCCATTGTCATTTCGATGATGAGCTGTATGCCAGTATTAAAGTGACCGATAAACAAGGGAACACCACGT TTGAGGAAAAACTTTATGGCACTAATGCGAATATTTCAAATACCATTATTCCCTTCGAGAAAGGTTATAAATTAGATATC TTCCATGCTGAGCCTAGCCGGTTACGTGTTTCATCTGGTGATAGCGATACTTTAATTCCAGAGTCCAAACAGAATAGTTT TATCATGACATCAATTGGTATAGAAAATACCAGGCAGGGCAGTACCGAGGCAATAATATCAGATCAATTCGATACGGAAA CATTGGTTCAAGATATGTCTTCTTTTGGTGATTCCTCCATTGCGCCTGTGGATAATGTTTACGGAAACATGAATGACAGA AATCACTATCTTAATGTAGTGAGTACCGTTGAATAA
Upstream 100 bases:
>100_bases TTAAACCAATGATAATAAAGAATAATTAGTTGTTCTATATATTCATGAAGATAATGGTATCGCAGTATTTTAATTTAATA TTAACGATAATCTTATCTGA
Downstream 100 bases:
>100_bases TTAATTATGGCTCTCTTTCCTCTGAATCTCTGAAGAGAAGAAAGAGAAAAAAGAGAGCCATGTTTACGGCGAGTTATTTA TGCTGTTGCTGTTTTTGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: Viral Enhancin Protein; Metallprotease Enhancin Family
Number of amino acids: Translated: 411; Mature: 411
Protein sequence:
>411_residues MELNMSDANVIPSQLIPIKSPIAARLDSSDLIDVRPQNINLIGKKLNSMADINIDSKNKKININIAEKKFSSDYIPEEYI YIAVWDAKGKMVFQKKLSDAEIKEEKIELPFEVGYQLEMYHPIPRRLVSSPDLCSIIDSNSPFTLLVMTPLGVTNLQMES YPTDIIEADFIHPNSIPVGSNADIIESESESESESESAPEPIPSTPIAPDTPPASTDPIVSASTHTGIDSATKLMVSFQF KLLGLCDYDIATVTIDEESKLAGIKIVTDSPHCHFDDELYASIKVTDKQGNTTFEEKLYGTNANISNTIIPFEKGYKLDI FHAEPSRLRVSSGDSDTLIPESKQNSFIMTSIGIENTRQGSTEAIISDQFDTETLVQDMSSFGDSSIAPVDNVYGNMNDR NHYLNVVSTVE
Sequences:
>Translated_411_residues MELNMSDANVIPSQLIPIKSPIAARLDSSDLIDVRPQNINLIGKKLNSMADINIDSKNKKININIAEKKFSSDYIPEEYI YIAVWDAKGKMVFQKKLSDAEIKEEKIELPFEVGYQLEMYHPIPRRLVSSPDLCSIIDSNSPFTLLVMTPLGVTNLQMES YPTDIIEADFIHPNSIPVGSNADIIESESESESESESAPEPIPSTPIAPDTPPASTDPIVSASTHTGIDSATKLMVSFQF KLLGLCDYDIATVTIDEESKLAGIKIVTDSPHCHFDDELYASIKVTDKQGNTTFEEKLYGTNANISNTIIPFEKGYKLDI FHAEPSRLRVSSGDSDTLIPESKQNSFIMTSIGIENTRQGSTEAIISDQFDTETLVQDMSSFGDSSIAPVDNVYGNMNDR NHYLNVVSTVE >Mature_411_residues MELNMSDANVIPSQLIPIKSPIAARLDSSDLIDVRPQNINLIGKKLNSMADINIDSKNKKININIAEKKFSSDYIPEEYI YIAVWDAKGKMVFQKKLSDAEIKEEKIELPFEVGYQLEMYHPIPRRLVSSPDLCSIIDSNSPFTLLVMTPLGVTNLQMES YPTDIIEADFIHPNSIPVGSNADIIESESESESESESAPEPIPSTPIAPDTPPASTDPIVSASTHTGIDSATKLMVSFQF KLLGLCDYDIATVTIDEESKLAGIKIVTDSPHCHFDDELYASIKVTDKQGNTTFEEKLYGTNANISNTIIPFEKGYKLDI FHAEPSRLRVSSGDSDTLIPESKQNSFIMTSIGIENTRQGSTEAIISDQFDTETLVQDMSSFGDSSIAPVDNVYGNMNDR NHYLNVVSTVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45358; Mature: 45358
Theoretical pI: Translated: 4.20; Mature: 4.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELNMSDANVIPSQLIPIKSPIAARLDSSDLIDVRPQNINLIGKKLNSMADINIDSKNKK CCCCCCCCCCCCHHCCCCCCCHHHHCCCCCEEEECCCCCEEEHHHHCCEEEEEECCCCCE ININIAEKKFSSDYIPEEYIYIAVWDAKGKMVFQKKLSDAEIKEEKIELPFEVGYQLEMY EEEEEECCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCHHCHHHCCCCHHCCCEEEEE HPIPRRLVSSPDLCSIIDSNSPFTLLVMTPLGVTNLQMESYPTDIIEADFIHPNSIPVGS CCHHHHHCCCCCEEEEECCCCCEEEEEECCCCCEEEEECCCCCCCEEECCCCCCCCCCCC NADIIESESESESESESAPEPIPSTPIAPDTPPASTDPIVSASTHTGIDSATKLMVSFQF CCCEECCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHEEEEEEEE KLLGLCDYDIATVTIDEESKLAGIKIVTDSPHCHFDDELYASIKVTDKQGNTTFEEKLYG EEEEEECCCEEEEEECCCCCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCCHHHHEEC TNANISNTIIPFEKGYKLDIFHAEPSRLRVSSGDSDTLIPESKQNSFIMTSIGIENTRQG CCCCCCCEEEECCCCCEEEEEECCCCEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCC STEAIISDQFDTETLVQDMSSFGDSSIAPVDNVYGNMNDRNHYLNVVSTVE CCEEEEECCCCHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCEEEEEEEECC >Mature Secondary Structure MELNMSDANVIPSQLIPIKSPIAARLDSSDLIDVRPQNINLIGKKLNSMADINIDSKNKK CCCCCCCCCCCCHHCCCCCCCHHHHCCCCCEEEECCCCCEEEHHHHCCEEEEEECCCCCE ININIAEKKFSSDYIPEEYIYIAVWDAKGKMVFQKKLSDAEIKEEKIELPFEVGYQLEMY EEEEEECCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCHHCHHHCCCCHHCCCEEEEE HPIPRRLVSSPDLCSIIDSNSPFTLLVMTPLGVTNLQMESYPTDIIEADFIHPNSIPVGS CCHHHHHCCCCCEEEEECCCCCEEEEEECCCCCEEEEECCCCCCCEEECCCCCCCCCCCC NADIIESESESESESESAPEPIPSTPIAPDTPPASTDPIVSASTHTGIDSATKLMVSFQF CCCEECCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHEEEEEEEE KLLGLCDYDIATVTIDEESKLAGIKIVTDSPHCHFDDELYASIKVTDKQGNTTFEEKLYG EEEEEECCCEEEEEECCCCCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCCHHHHEEC TNANISNTIIPFEKGYKLDIFHAEPSRLRVSSGDSDTLIPESKQNSFIMTSIGIENTRQG CCCCCCCEEEECCCCCEEEEEECCCCEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCC STEAIISDQFDTETLVQDMSSFGDSSIAPVDNVYGNMNDRNHYLNVVSTVE CCEEEEECCCCHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA