| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is yigL [H]
Identifier: 153950238
GI number: 153950238
Start: 249894
End: 250703
Strand: Direct
Name: yigL [H]
Synonym: YpsIP31758_0222
Alternate gene names: 153950238
Gene position: 249894-250703 (Clockwise)
Preceding gene: 153949785
Following gene: 153950212
Centisome position: 5.29
GC content: 46.3
Gene sequence:
>810_bases ATGTATCATGTTGTTGCTTCCGATTTAGATGGCACGCTGCTATCGCCTAATCATACGTTGACCCCTTATACGAAAGAAAC ACTCAAATTGCTGACGCAGCGTGATGTGCATTTTGTATTCGCCACCGGGCGCCACCATATCGATGTGGCACAAATCCGCG ATAATTTGGAGATCAATGCTTTTATGATCACCTCTAACGGTGCGCGCGTGCATAACACTGAGGGAGAATTGATTTTCAGT CATAACCTTGATGCGGATATTGCCCGTGATTTGTACAATATTGAACATCATAATCCGGATATCCTGACTAACGTCTATCT GGGTGACGAATGGTTTATGAACCGCGAATGTCCGGAACAAGAAGAGTTTTTCCGTGAATCTGTGTTCAATTATCAGGTAT TTGAACCTGCATTGCTGCCGACTGACGGTGTATGTAAGGTTTATTTCACCTGCGAAGATCATGACAAGTTGCTGATCTTG GAAGAGGCCATTAATGCCCGCTGGGGCGATCGCGTTAACGTCAGTTTCTCCTTCCCTACCTGCCTGGAAGTGATGGGCGG CGGCGTGTCCAAAGGCCATGCCCTTGAACAGGTTGCTAAAATCATCGGTTATTCACTAAAAGACTGTATTGCCTTTGGCG ATGGCATGAATGATGTCGAAATGTTGTCGATGTCTGGCAAAGGCTGCATCATGCGCGACGCACATCAGCGGCTAAAAGAT GTGTTGCCGAATTTGGAAGTGATAGGCTCTAACGCTGATGATGCGGTACCACACTACTTGCGTAAGATGTTCTTAGGTAA GGAAGAGTAA
Upstream 100 bases:
>100_bases CGTGCCGAGGCGCTTAGCGCCATATTGCGCTTTTTCGCGCAACATCAATCATCAGTCGGCCATTAGGCGCCGACGCCACC AGAGGTTAGAACATACCACT
Downstream 100 bases:
>100_bases GGTTAACGTTGCAGTAGTATGATGATGCTGTGGAGTAGGGTGGCCTTTGGTCACCCTTTCTCCTTGGCGTTGCAGGGGTG TTAGCGGCGCGCACTCACCT
Product: sugar phosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 269; Mature: 269
Protein sequence:
>269_residues MYHVVASDLDGTLLSPNHTLTPYTKETLKLLTQRDVHFVFATGRHHIDVAQIRDNLEINAFMITSNGARVHNTEGELIFS HNLDADIARDLYNIEHHNPDILTNVYLGDEWFMNRECPEQEEFFRESVFNYQVFEPALLPTDGVCKVYFTCEDHDKLLIL EEAINARWGDRVNVSFSFPTCLEVMGGGVSKGHALEQVAKIIGYSLKDCIAFGDGMNDVEMLSMSGKGCIMRDAHQRLKD VLPNLEVIGSNADDAVPHYLRKMFLGKEE
Sequences:
>Translated_269_residues MYHVVASDLDGTLLSPNHTLTPYTKETLKLLTQRDVHFVFATGRHHIDVAQIRDNLEINAFMITSNGARVHNTEGELIFS HNLDADIARDLYNIEHHNPDILTNVYLGDEWFMNRECPEQEEFFRESVFNYQVFEPALLPTDGVCKVYFTCEDHDKLLIL EEAINARWGDRVNVSFSFPTCLEVMGGGVSKGHALEQVAKIIGYSLKDCIAFGDGMNDVEMLSMSGKGCIMRDAHQRLKD VLPNLEVIGSNADDAVPHYLRKMFLGKEE >Mature_269_residues MYHVVASDLDGTLLSPNHTLTPYTKETLKLLTQRDVHFVFATGRHHIDVAQIRDNLEINAFMITSNGARVHNTEGELIFS HNLDADIARDLYNIEHHNPDILTNVYLGDEWFMNRECPEQEEFFRESVFNYQVFEPALLPTDGVCKVYFTCEDHDKLLIL EEAINARWGDRVNVSFSFPTCLEVMGGGVSKGHALEQVAKIIGYSLKDCIAFGDGMNDVEMLSMSGKGCIMRDAHQRLKD VLPNLEVIGSNADDAVPHYLRKMFLGKEE
Specific function: Unknown
COG id: COG0561
COG function: function code R; Predicted hydrolases of the HAD superfamily
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]
Homologues:
Organism=Escherichia coli, GI48994981, Length=265, Percent_Identity=74.3396226415094, Blast_Score=422, Evalue=1e-119, Organism=Escherichia coli, GI87081741, Length=260, Percent_Identity=41.1538461538462, Blast_Score=192, Evalue=3e-50, Organism=Escherichia coli, GI1786982, Length=274, Percent_Identity=27.3722627737226, Blast_Score=84, Evalue=8e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023214 - InterPro: IPR013200 - InterPro: IPR006379 - InterPro: IPR000150 [H]
Pfam domain/function: PF08282 Hydrolase_3 [H]
EC number: NA
Molecular weight: Translated: 30479; Mature: 30479
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: PS01228 COF_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYHVVASDLDGTLLSPNHTLTPYTKETLKLLTQRDVHFVFATGRHHIDVAQIRDNLEINA CEEEEECCCCCCEECCCCCCCCCHHHHHHHHHHCCEEEEEECCCCEEEHHHHHCCCEEEE FMITSNGARVHNTEGELIFSHNLDADIARDLYNIEHHNPDILTNVYLGDEWFMNRECPEQ EEEECCCCEEECCCCCEEEECCCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCH EEFFRESVFNYQVFEPALLPTDGVCKVYFTCEDHDKLLILEEAINARWGDRVNVSFSFPT HHHHHHHHCCEEEECCCCCCCCCCEEEEEEECCCCCEEEEEHHHCCCCCCEEEEEECCHH CLEVMGGGVSKGHALEQVAKIIGYSLKDCIAFGDGMNDVEMLSMSGKGCIMRDAHQRLKD HHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHH VLPNLEVIGSNADDAVPHYLRKMFLGKEE HCCCEEEECCCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure MYHVVASDLDGTLLSPNHTLTPYTKETLKLLTQRDVHFVFATGRHHIDVAQIRDNLEINA CEEEEECCCCCCEECCCCCCCCCHHHHHHHHHHCCEEEEEECCCCEEEHHHHHCCCEEEE FMITSNGARVHNTEGELIFSHNLDADIARDLYNIEHHNPDILTNVYLGDEWFMNRECPEQ EEEECCCCEEECCCCCEEEECCCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCH EEFFRESVFNYQVFEPALLPTDGVCKVYFTCEDHDKLLILEEAINARWGDRVNVSFSFPT HHHHHHHHCCEEEECCCCCCCCCCEEEEEEECCCCCEEEEEHHHCCCCCCEEEEEECCHH CLEVMGGGVSKGHALEQVAKIIGYSLKDCIAFGDGMNDVEMLSMSGKGCIMRDAHQRLKD HHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHH VLPNLEVIGSNADDAVPHYLRKMFLGKEE HCCCEEEECCCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]