| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153949768
Identifier: 153949768
GI number: 153949768
Start: 4695091
End: 4696290
Strand: Direct
Name: 153949768
Synonym: YpsIP31758_4159
Alternate gene names: NA
Gene position: 4695091-4696290 (Clockwise)
Preceding gene: 153949187
Following gene: 153948522
Centisome position: 99.4
GC content: 48.83
Gene sequence:
>1200_bases ATGATTATAAAACCACGTGTACGCGGCTTTATCTGTGTGACAGCTCATCCGGCGGGCTGTGAAGCCAACGTCAAGAAGCA GATCGACTACGTCACAACAGAAGGCCCAATCGCTAATGGTCCTAAAAGAGTATTAGTGATTGGTGCGTCAACTGGATACG GGTTAGCAGCCCGGATCACAGCAGCATTTGGTTGTGGCGCCGATACGCTGGGCGTTTTCTTTGAACGCCCCGGTGAAGAA GGCAAACCCGGAACCTCCGGTTGGTACAATAGCGCGGCTTTCCACAAATTTGCGGCACAGAAAGGCTTGTACGCAAAAAG CATCAACGGCGATGCGTTCTCTGATGAGATCAAACAACTGACTATCGATGCTATCAAGCAAGATCTGGGTCAAGTTGATC AGGTTATCTATAGCCTTGCTTCACCACGACGCACCCATCCGAAAACGGGCGAAGTGTTTAACTCGACACTGAAACCTATC GGTAATGCTGTTAATTTGCGTGGTCTGGACACCGATAAAGAAGTTATCAAGGAATCGGTCTTACAACCGGCAACACAAAG CGAGATCGACAGTACAGTGGCCGTCATGGGTGGCGAAGACTGGCAGATGTGGATTGACGCTCTGTTGGACGCTGGCGTAC TGGCCGAAGGGGCACAAACGACAGCATTCACCTATCTAGGCGAAAAAATTACTCACGATATTTACTGGAACGGTTCCATT GGCGCAGCCAAAAAAGATCTGGACCAGAAGGTGCTGGCTATCCGCGAGAGCCTGGCGGCTCACGGCGGTGGCGATGCTCG CGTATCCGTATTAAAAGCGGTCGTGACCCAAGCCAGCTCTGCCATTCCAATGATGCCTCTGTATTTATCATTGCTATTTA AAGTGATGAAAGAGAAAGGCACTCACGAAGGCTGCATCGAGCAGGTCTATTCCCTGTATAAAGACAGCCTGTGCGGCGAT TCACCGCATATGGACCAAGAAGGTCGTCTGCGGGCTGATTACAAAGAATTGGATCCTGAAGTCCAAAATCAGGTTCAGCA GTTGTGGGATCAGGTTACCAACGACAATATTTATCTGCTAACTGATTTCGTTGGTTATAAATCAGAGTTCCTAAATCTGT TCGGTTTCGGTATCGACGGTGTGGATTATGATGCAGACGTTAACCCTGATGTAAAAATCCCTAACTTGATTCAGGGTTAA
Upstream 100 bases:
>100_bases AGATATACCCTAAATAATTCAAGTTGTAGGAAAGCGGCTAACGCACATGCAACTTGAAGTATGACGGGGATAATTACTCG TTTCACAAATTGAGGTTCCC
Downstream 100 bases:
>100_bases GCTCCGGTTTATTGCTCAATAACCTGCTGCGTCACTATCACGCAGCAGGTTGATCATCTTCTTACTGGGGTTATCAAAAA TATCAATTGCAAACCGCAGG
Product: trans-2-enoyl-CoA reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 399; Mature: 399
Protein sequence:
>399_residues MIIKPRVRGFICVTAHPAGCEANVKKQIDYVTTEGPIANGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEE GKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEIKQLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSTLKPI GNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVMGGEDWQMWIDALLDAGVLAEGAQTTAFTYLGEKITHDIYWNGSI GAAKKDLDQKVLAIRESLAAHGGGDARVSVLKAVVTQASSAIPMMPLYLSLLFKVMKEKGTHEGCIEQVYSLYKDSLCGD SPHMDQEGRLRADYKELDPEVQNQVQQLWDQVTNDNIYLLTDFVGYKSEFLNLFGFGIDGVDYDADVNPDVKIPNLIQG
Sequences:
>Translated_399_residues MIIKPRVRGFICVTAHPAGCEANVKKQIDYVTTEGPIANGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEE GKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEIKQLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSTLKPI GNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVMGGEDWQMWIDALLDAGVLAEGAQTTAFTYLGEKITHDIYWNGSI GAAKKDLDQKVLAIRESLAAHGGGDARVSVLKAVVTQASSAIPMMPLYLSLLFKVMKEKGTHEGCIEQVYSLYKDSLCGD SPHMDQEGRLRADYKELDPEVQNQVQQLWDQVTNDNIYLLTDFVGYKSEFLNLFGFGIDGVDYDADVNPDVKIPNLIQG >Mature_399_residues MIIKPRVRGFICVTAHPAGCEANVKKQIDYVTTEGPIANGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEE GKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEIKQLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSTLKPI GNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVMGGEDWQMWIDALLDAGVLAEGAQTTAFTYLGEKITHDIYWNGSI GAAKKDLDQKVLAIRESLAAHGGGDARVSVLKAVVTQASSAIPMMPLYLSLLFKVMKEKGTHEGCIEQVYSLYKDSLCGD SPHMDQEGRLRADYKELDPEVQNQVQQLWDQVTNDNIYLLTDFVGYKSEFLNLFGFGIDGVDYDADVNPDVKIPNLIQG
Specific function: Probable reductase [H]
COG id: COG3007
COG function: function code S; Uncharacterized paraquat-inducible protein B
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TER reductase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010758 [H]
Pfam domain/function: PF07055 scADH [H]
EC number: NA
Molecular weight: Translated: 43332; Mature: 43332
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIKPRVRGFICVTAHPAGCEANVKKQIDYVTTEGPIANGPKRVLVIGASTGYGLAARIT CCCCCCCCEEEEEECCCCCCCCCHHHHHCEEECCCCCCCCCCEEEEEECCCCCCHHHHHH AAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEIKQL HHHCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEECCCCCHHHHHHHHH TIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSTLKPIGNAVNLRGLDTDKEVIKESV HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEECCCCCHHHHHHHHH LQPATQSEIDSTVAVMGGEDWQMWIDALLDAGVLAEGAQTTAFTYLGEKITHDIYWNGSI HCCCHHHHHHCEEEEECCCHHHHHHHHHHHCHHHCCCCCHHHHHHHHHHHHHEEEECCCC GAAKKDLDQKVLAIRESLAAHGGGDARVSVLKAVVTQASSAIPMMPLYLSLLFKVMKEKG CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC THEGCIEQVYSLYKDSLCGDSPHMDQEGRLRADYKELDPEVQNQVQQLWDQVTNDNIYLL CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHCCCCEEEE TDFVGYKSEFLNLFGFGIDGVDYDADVNPDVKIPNLIQG ECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHCCC >Mature Secondary Structure MIIKPRVRGFICVTAHPAGCEANVKKQIDYVTTEGPIANGPKRVLVIGASTGYGLAARIT CCCCCCCCEEEEEECCCCCCCCCHHHHHCEEECCCCCCCCCCEEEEEECCCCCCHHHHHH AAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEIKQL HHHCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEECCCCCHHHHHHHHH TIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSTLKPIGNAVNLRGLDTDKEVIKESV HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEECCCCCHHHHHHHHH LQPATQSEIDSTVAVMGGEDWQMWIDALLDAGVLAEGAQTTAFTYLGEKITHDIYWNGSI HCCCHHHHHHCEEEEECCCHHHHHHHHHHHCHHHCCCCCHHHHHHHHHHHHHEEEECCCC GAAKKDLDQKVLAIRESLAAHGGGDARVSVLKAVVTQASSAIPMMPLYLSLLFKVMKEKG CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC THEGCIEQVYSLYKDSLCGDSPHMDQEGRLRADYKELDPEVQNQVQQLWDQVTNDNIYLL CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHCCCCEEEE TDFVGYKSEFLNLFGFGIDGVDYDADVNPDVKIPNLIQG ECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA