Click here to switch to the map view.

The map label for this gene is yjjA [H]

Identifier: 153949684

GI number: 153949684

Start: 3981129

End: 3981620

Strand: Direct

Name: yjjA [H]

Synonym: YpsIP31758_3527

Alternate gene names: 153949684

Gene position: 3981129-3981620 (Clockwise)

Preceding gene: 153949480

Following gene: 153948837

Centisome position: 84.29

GC content: 46.54

Gene sequence:

>492_bases
ATGGATAACATTCATCGCCTATTCTTAGCACTGGCTTTTTCTGCCCCGTTGGTGACCGGTGCTGCTCACGCCAACAGTTT
ATTGGATTCGGTAAAAAGCACCGCGGAGCAATACGGTAAATCAGCCGGTAGCTCATCGTCACTGCCGTCGATGTCATCAC
TGACGAACTTACTCAATGGCGGAGATAAAGCGTTAAGTGCAGGCACCATGAACAATGCCACCGGTATTTTGCAATATTGC
GTACAGAATAATGTGTTATCAAGCGATGGCACCACGGCGATTAAAGACCAACTGATGAGCAAACTGGGTATCAGTGGTAC
AGAAGCGGCGAAAAGTACGGATTATGAAGAGGGCTTGGGCGGGTTGCTGAAAACCAGTGAAGGCAAAAGCGTAAACCTGA
ATGACCTCGGTACCGGGCAAATCACAGAAAAAATCAAAACCAAAGCCTGCGATTTAGTGCTTAAGCAAGGAAAGTCATTC
TTATTGAAGTAA

Upstream 100 bases:

>100_bases
CGTTATCAGATAACCCCTATACCGCAAAATGAAATCTGTAAGCTATTCTTACGGTCTCACGCCATATTGGCTGTGACCAC
CATATAAAACAGGAGTTTCT

Downstream 100 bases:

>100_bases
TCCGATAAGGGTCACTGGGTGCCACCTCAGACGCGGCACCCGTCATGTTGAAATGAAAGAATCACAGTTCGAGCTCGTGT
TTCAGCAGCGTTTCTATTTG

Product: hypothetical protein

Products: NA

Alternate protein names: Protein P-18 [H]

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MDNIHRLFLALAFSAPLVTGAAHANSLLDSVKSTAEQYGKSAGSSSSLPSMSSLTNLLNGGDKALSAGTMNNATGILQYC
VQNNVLSSDGTTAIKDQLMSKLGISGTEAAKSTDYEEGLGGLLKTSEGKSVNLNDLGTGQITEKIKTKACDLVLKQGKSF
LLK

Sequences:

>Translated_163_residues
MDNIHRLFLALAFSAPLVTGAAHANSLLDSVKSTAEQYGKSAGSSSSLPSMSSLTNLLNGGDKALSAGTMNNATGILQYC
VQNNVLSSDGTTAIKDQLMSKLGISGTEAAKSTDYEEGLGGLLKTSEGKSVNLNDLGTGQITEKIKTKACDLVLKQGKSF
LLK
>Mature_163_residues
MDNIHRLFLALAFSAPLVTGAAHANSLLDSVKSTAEQYGKSAGSSSSLPSMSSLTNLLNGGDKALSAGTMNNATGILQYC
VQNNVLSSDGTTAIKDQLMSKLGISGTEAAKSTDYEEGLGGLLKTSEGKSVNLNDLGTGQITEKIKTKACDLVLKQGKSF
LLK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082434, Length=158, Percent_Identity=46.2025316455696, Blast_Score=132, Evalue=1e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019637 [H]

Pfam domain/function: PF10696 DUF2501 [H]

EC number: NA

Molecular weight: Translated: 16873; Mature: 16873

Theoretical pI: Translated: 8.21; Mature: 8.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNIHRLFLALAFSAPLVTGAAHANSLLDSVKSTAEQYGKSAGSSSSLPSMSSLTNLLNG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCC
GDKALSAGTMNNATGILQYCVQNNVLSSDGTTAIKDQLMSKLGISGTEAAKSTDYEEGLG
CCHHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHCCCHHHHHC
GLLKTSEGKSVNLNDLGTGQITEKIKTKACDLVLKQGKSFLLK
HHHCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHCHHHCCC
>Mature Secondary Structure
MDNIHRLFLALAFSAPLVTGAAHANSLLDSVKSTAEQYGKSAGSSSSLPSMSSLTNLLNG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCC
GDKALSAGTMNNATGILQYCVQNNVLSSDGTTAIKDQLMSKLGISGTEAAKSTDYEEGLG
CCHHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHCCCHHHHHC
GLLKTSEGKSVNLNDLGTGQITEKIKTKACDLVLKQGKSFLLK
HHHCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2844800; 7610040; 9278503 [H]