| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153949610
Identifier: 153949610
GI number: 153949610
Start: 4419747
End: 4420145
Strand: Reverse
Name: 153949610
Synonym: YpsIP31758_3943
Alternate gene names: NA
Gene position: 4420145-4419747 (Counterclockwise)
Preceding gene: 153949647
Following gene: 153949657
Centisome position: 93.58
GC content: 33.83
Gene sequence:
>399_bases GTGGCTAATAAAAACAAAATATCGGTTGCCTGTGGGGCGATATCATTGTTTGTTGTCGCCTCATTTTCTTTGTTTTTCTC ATTAACTCATTATTTTAATTTTTTTAAAATGAATGATGAAGTGCATTTCTCTTGGGCTGTATCTTTGTTGTTATCTGGTT CACCATTATTATTTTATTTATCTGTGGTCTCTGGTGGGTATATCATCGGATATGAAAAAATATATAATGATCGTGTCGGT AAGATACTTGCGTACATAGCTGTTCTGGGGATGGTTTTTAGTCTGTTTTTTTCTTTTTATGTGGATTCTTCTTTAAAAGA AGCTGGGTATTTAAAGTGCGAAAGGAAATCTTTTATCGCGCCCAATAAGTATGTAATCGACCTGAAATTATGCCGTTAG
Upstream 100 bases:
>100_bases TGAACCACCCATAGCCCGGTTTGGTTATGGGTTTTTAGGCCAAAATAATAGCGCTCACCTCATCCAGATGAAATATTTAA TACTTGGGGGGTATACAGTC
Downstream 100 bases:
>100_bases GCAAAGCTTGGTTGTTGTTAAAGATGAATTTTTTAACGGACTCGATGCCGTCATAAAAGTGATATTTAACGGCTACGCTG ATGCCACTTAAAAATGAGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 132; Mature: 131
Protein sequence:
>132_residues MANKNKISVACGAISLFVVASFSLFFSLTHYFNFFKMNDEVHFSWAVSLLLSGSPLLFYLSVVSGGYIIGYEKIYNDRVG KILAYIAVLGMVFSLFFSFYVDSSLKEAGYLKCERKSFIAPNKYVIDLKLCR
Sequences:
>Translated_132_residues MANKNKISVACGAISLFVVASFSLFFSLTHYFNFFKMNDEVHFSWAVSLLLSGSPLLFYLSVVSGGYIIGYEKIYNDRVG KILAYIAVLGMVFSLFFSFYVDSSLKEAGYLKCERKSFIAPNKYVIDLKLCR >Mature_131_residues ANKNKISVACGAISLFVVASFSLFFSLTHYFNFFKMNDEVHFSWAVSLLLSGSPLLFYLSVVSGGYIIGYEKIYNDRVGK ILAYIAVLGMVFSLFFSFYVDSSLKEAGYLKCERKSFIAPNKYVIDLKLCR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14926; Mature: 14795
Theoretical pI: Translated: 9.31; Mature: 9.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANKNKISVACGAISLFVVASFSLFFSLTHYFNFFKMNDEVHFSWAVSLLLSGSPLLFYL CCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCEEHHHHHHHHHCCCCHHHHH SVVSGGYIIGYEKIYNDRVGKILAYIAVLGMVFSLFFSFYVDSSLKEAGYLKCERKSFIA HHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCC PNKYVIDLKLCR CCEEEEEEEECC >Mature Secondary Structure ANKNKISVACGAISLFVVASFSLFFSLTHYFNFFKMNDEVHFSWAVSLLLSGSPLLFYL CCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCEEHHHHHHHHHCCCCHHHHH SVVSGGYIIGYEKIYNDRVGKILAYIAVLGMVFSLFFSFYVDSSLKEAGYLKCERKSFIA HHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCC PNKYVIDLKLCR CCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA