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The map label for this gene is yhfA [H]

Identifier: 153949647

GI number: 153949647

Start: 4420250

End: 4420657

Strand: Reverse

Name: yhfA [H]

Synonym: YpsIP31758_3944

Alternate gene names: 153949647

Gene position: 4420657-4420250 (Counterclockwise)

Preceding gene: 153947780

Following gene: 153949610

Centisome position: 93.59

GC content: 49.02

Gene sequence:

>408_bases
ATGCAAGCACGTGTCAAGTGGGTTGAGGGGCTAACATTTTTGGGCGAATCCGCGTCAGGCCATCAAGTTTTGATGGATGG
AAATTCGGGTGATAAGGCACCAAGCCCGATGGAAATGCTATTAATGTCAGCGGGGGGGTGTAGCGCCATTGATGTCGTGT
CTATTTTACAAAAAGGGCGTAACGATGTGCGAGATTGCGAGGTTAAATTAACCTCAGAACGTCGGGAAGAAGCCCCGCGT
CTGTTTACTCAAATCAACTTGCACTTTATCGTCAGCGGTAAAGGGTTAACGGACAAAGTGGTGGAGCGCGCAGTTGATCT
ATCAGCCGAAAAATATTGCTCTGTTGCTCTGATGTTGGGGAAAGCCGCAACCATTACCCACAGCTTTGAGGTACGCGAAG
TCGCGTAA

Upstream 100 bases:

>100_bases
TTGTGTTGTATCGCTTCAGCATGATGAACGTCCAGTTACATTGCCACTTTGTAAATGAAAGGGTAGTCTAAATTAGAAAA
TTTAACCGGGAGCAGGCGTT

Downstream 100 bases:

>100_bases
ATGGTGAACCACCCATAGCCCGGTTTGGTTATGGGTTTTTAGGCCAAAATAATAGCGCTCACCTCATCCAGATGAAATAT
TTAATACTTGGGGGGTATAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MQARVKWVEGLTFLGESASGHQVLMDGNSGDKAPSPMEMLLMSAGGCSAIDVVSILQKGRNDVRDCEVKLTSERREEAPR
LFTQINLHFIVSGKGLTDKVVERAVDLSAEKYCSVALMLGKAATITHSFEVREVA

Sequences:

>Translated_135_residues
MQARVKWVEGLTFLGESASGHQVLMDGNSGDKAPSPMEMLLMSAGGCSAIDVVSILQKGRNDVRDCEVKLTSERREEAPR
LFTQINLHFIVSGKGLTDKVVERAVDLSAEKYCSVALMLGKAATITHSFEVREVA
>Mature_135_residues
MQARVKWVEGLTFLGESASGHQVLMDGNSGDKAPSPMEMLLMSAGGCSAIDVVSILQKGRNDVRDCEVKLTSERREEAPR
LFTQINLHFIVSGKGLTDKVVERAVDLSAEKYCSVALMLGKAATITHSFEVREVA

Specific function: Unknown

COG id: COG1765

COG function: function code O; Predicted redox protein, regulator of disulfide bond formation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789755, Length=131, Percent_Identity=87.0229007633588, Blast_Score=240, Evalue=3e-65,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015946
- InterPro:   IPR003718 [H]

Pfam domain/function: PF02566 OsmC [H]

EC number: NA

Molecular weight: Translated: 14668; Mature: 14668

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQARVKWVEGLTFLGESASGHQVLMDGNSGDKAPSPMEMLLMSAGGCSAIDVVSILQKGR
CCCHHHHHHHHHEECCCCCCCEEEEECCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHCC
NDVRDCEVKLTSERREEAPRLFTQINLHFIVSGKGLTDKVVERAVDLSAEKYCSVALMLG
CCCCHHEEEECHHHHHHHHHHHHEEEEEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHC
KAATITHSFEVREVA
CCEEEEECEEEEECC
>Mature Secondary Structure
MQARVKWVEGLTFLGESASGHQVLMDGNSGDKAPSPMEMLLMSAGGCSAIDVVSILQKGR
CCCHHHHHHHHHEECCCCCCCEEEEECCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHCC
NDVRDCEVKLTSERREEAPRLFTQINLHFIVSGKGLTDKVVERAVDLSAEKYCSVALMLG
CCCCHHEEEECHHHHHHHHHHHHEEEEEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHC
KAATITHSFEVREVA
CCEEEEECEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]